Oryx dammah (scimitar-horned oryx): 120880187
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Entry
120880187 CDS
T07255
Symbol
CLSTN1
Name
(RefSeq) calsyntenin-1 isoform X1
KO
K22659
calsyntenin 1
Organism
oda
Oryx dammah (scimitar-horned oryx)
Brite
KEGG Orthology (KO) [BR:
oda00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
oda04515
]
120880187 (CLSTN1)
Cell adhesion molecules [BR:
oda04515
]
Cadherins
Cadherin related
120880187 (CLSTN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CLSTN_C
Cadherin
Laminin_G_3
CDC45
Laminin_G_2
FAM176
Glyco_hydro_16
EphA2_TM
Toxin_R_bind_N
V_ATPase_I
Cadherin_C_2
PFF1_TM
Motif
Other DBs
NCBI-GeneID:
120880187
NCBI-ProteinID:
XP_040119304
LinkDB
All DBs
Position
Unknown
AA seq
970 aa
AA seq
DB search
MLRRPAPALAPAAWLLLAGLLCSGGGWASRVNKHKPWLEPTYHGLVTESDSTVLLDPPLI
ALDKDAPLRFAGEICGFKIHGQNVPFDAVVVDKSTGEGVIRSTEKLDCELQKDYTFTIQA
YDCGKGPDGANVKKSHKATVHIQVNDVNEYAPVFKEKSYKATVVEGRQYDSILRVEAVDA
DCSPQFSQICSYEIVTPDVPFTVDKDGYIKNTEKLNYGKEHQYKLTVTAYDCGKKRAAED
VLVKISIKPTCTPGWQGWNSRVEYEPGTGALTLFPNVHLETCDESVASVQVVVELETSHI
GKGCDRDTYSEKSLHRLCGAASGTAELLPSPGGSWNWTVGLPTDNGHDSDQVFEFNGTQA
VRVPDGIVSVNPREPFTISVWMRHGPFGKKKETILCSSDKTEMNRHHYSLYVHGCRLVFL
LRQDPSEEKKYKPAEFHWKLSQVCDEGWHHYVLNVEIPSVTLYVDGVPHEPFSVTEDYPL
HPSKIETQLVVGACWQEYSGVESDNETEPVPLASTGGDLRMTQFFRGNLAGLTIRSGKLT
DKKVIDCLYTCKEGLDLHNPEDNGRGVKIQANPSQSVLTLEGEDVGELDKAMQHISYLNS
RQFPTPGIRRLKITSTVKCFNEAACISIPAVDGYVMVLQPEEPKISLSGIHHFARAASEF
ESSEGVFLFPELRIISTITREVEPEGEGDEDPTVQESLVSEEIVHDLDTCEVTVEGEELN
GEQESLEVDAAHLQQKGIEMSSSDMGVVFTGVDTMASYEETLHLLRYRNWHTRSLLDRKF
KLVCSELNGRYVSNEFQVEVNVIHTANPMEHASHIAAQPQFVHPEHRSFIDLSGHNLANP
HPFAVVPSTATVVIVVCVSFLVFMIILGVFRIRAAHQRTMRDQDTGKENEMDWDDSALTI
TVNPMETYEDQHSSEEEEEEEEEESEDGDEEDDITSAESESSEEDEGEHGDPQTANRQQQ
LEWDDSTLSY
NT seq
2913 nt
NT seq
+upstream
nt +downstream
nt
atgctgcgccgccctgcgcccgcgctggccccggccgcctggctgctgctggccgggctg
ctctgcagcggcgggggctgggcctcgcgagtcaacaagcacaagccgtggctggagccc
acatatcatggcttagttacggagagcgacagcaccgtgctccttgacccccctctcatc
gccctggacaaagacgctcctttacgctttgcaggtgagatttgtggatttaagattcac
ggacagaatgtgccctttgacgcagtggtcgtggataaatccactggcgagggggtcatt
cgctccacagagaagctggactgtgagctgcagaaggactacacgttcaccatccaggcc
tatgactgtgggaaggggccagacggggccaatgtaaaaaaatctcacaaagcaactgtc
cacattcaggtgaacgacgttaacgaatatgcgcctgtgttcaaggagaagtcctacaaa
gccacagtggtggaggggaggcagtatgacagcatcttgagggtggaggcggtggacgca
gactgctccccccagttcagccaaatctgcagctatgagatcgtcaccccagatgtgcca
ttcaccgttgacaaagatggttacataaaaaacacagagaagctgaactatggtaaagag
caccagtacaagctgactgtcacggcctacgactgcgggaagaaaagagcggcagaagac
gttttggtgaagatcagcatcaagcccacctgcacccctgggtggcaaggatggaacagc
agggtcgaatacgagcctggcaccggcgctctgacactctttccgaacgtccacctggaa
acgtgtgacgagtcggtggcctcagtgcaggtagtcgtggagctggagaccagccacatc
gggaagggctgtgaccgtgacacctactctgagaagtcacttcaccggctctgcggtgct
gcgtctggcacggctgagctgctgccttccccaggaggctcctggaactggaccgtcggc
cttcccacggacaacggccatgacagtgaccaggtcttcgagttcaacggcactcaggcg
gtgagagtcccggatggcatcgtctccgtcaaccccagggagccctttacgatctctgtg
tggatgaggcacgggccatttggcaagaagaaggagacgattctttgcagctcagacaaa
acagagatgaaccgacaccattattcactctatgtccacggctgccggctggttttcctc
ctccgtcaggatccttcagaagagaagaaatacaaacctgcagagttccactggaagctg
agtcaggtctgtgacgagggatggcatcactatgtcctcaacgtggaaatccccagtgtg
accctctacgtggacggtgtccctcatgagcccttctctgtcactgaagattacccactt
catccatccaagatcgaaacccagctcgtggttggggcttgctggcaagaatattcagga
gttgaaagtgacaatgaaactgagcctgtgcctctggcctccacaggtggtgacttgcgc
atgacccagtttttccgaggtaatctggctggtctgaccatccgttctgggaagcttaca
gataagaaggtgattgactgtctgtatacctgcaaagaggggctagacctgcacaaccct
gaagacaatggcagaggtgtcaagatccaggccaaccctagtcagtcggtgttgaccttg
gagggagaggacgtgggggagctcgataaggccatgcagcacatttcctaccttaattca
cgacagttccccaccccagggatccgaagactcaaaatcaccagcacagtcaagtgtttt
aacgaggctgcctgcatctccatccctgcggtggatggctacgtgatggttttgcagcca
gaagagcccaagatcagtctgagcggcatccaccattttgcccgagcggcttctgaattt
gaaagctcagagggggttttcctcttccctgagcttcggatcatcagcaccatcacgaga
gaagtggagcccgaaggggaaggggatgaggacccaacagttcaagagtcactggtgtcg
gaggagatcgtgcacgacctggacacctgtgaggtcacagtggagggagaagaactgaat
ggagagcaggagagcctggaggtggacgcggcccacctgcagcagaagggcatcgaaatg
agcagctctgacatgggtgtggtcttcacaggtgttgacaccatggccagctacgaggag
accttacacctcctgcgctatcggaactggcacaccaggtccttgcttgaccgcaagttc
aagcttgtctgctctgagctgaatggtcgctacgtcagcaacgagttccaggtggaggtg
aatgtcatccacacggccaaccccatggagcacgccagccacatagctgcccagccgcag
ttcgtccatcctgagcaccgctccttcattgacctctctggtcacaacctggccaacccc
cacccttttgcagtcgtccccagcactgccaccgtcgtgattgtggtgtgtgtcagcttc
ctggttttcatgatcatcctgggggtgttccggatccgggctgcacaccagagaaccatg
cgggaccaggacaccgggaaagagaacgagatggactgggacgactccgccctgaccatc
accgtgaaccccatggaaacatacgaggaccagcatagcagtgaggaggaagaggaggag
gaggaagaggagagcgaagatggggacgaggaggacgacatcaccagtgccgagtcggag
agcagtgaggaggacgagggggagcacggagacccgcagactgcaaaccggcagcagcag
ctggagtgggacgactccaccctcagctactga
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