Oryx dammah (scimitar-horned oryx): 120880454
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Entry
120880454 CDS
T07255
Symbol
TPR
Name
(RefSeq) nucleoprotein TPR
KO
K09291
nucleoprotein TPR
Organism
oda
Oryx dammah (scimitar-horned oryx)
Pathway
oda03013
Nucleocytoplasmic transport
oda05014
Amyotrophic lateral sclerosis
oda05200
Pathways in cancer
oda05216
Thyroid cancer
Brite
KEGG Orthology (KO) [BR:
oda00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
120880454 (TPR)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
120880454 (TPR)
09162 Cancer: specific types
05216 Thyroid cancer
120880454 (TPR)
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
120880454 (TPR)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oda03019
]
120880454 (TPR)
Messenger RNA biogenesis [BR:
oda03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
120880454 (TPR)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_MLP1_2
Nucleoprot-TPR
TPR
Astrin_C
Seryl_tRNA_N
CEP162_coil_mid
YwqH-like
Motif
Other DBs
NCBI-GeneID:
120880454
NCBI-ProteinID:
XP_040119732
LinkDB
All DBs
Position
Unknown
AA seq
2360 aa
AA seq
DB search
MAAVLQQVLERTELNKLPKSVQNKLEKFLADQQSEIDGLKGRHEKFKVESEQQYFEIEKR
LSHSQERLVNETRECQSLRLELEKLNSQLKALTEKNKELEVAQDRNIAIQSQFTRTKEEL
EAEKRDLIRTNERLSQELEYLTEDFKRLNEKFKESNATKGELQLKLDELQASDVSVKYRE
KRLEQEKELLHNQNTWLNTELKTKTDELLALGREKGNEILELKCNLENKKEEVSRMEEQM
NGLKASNENLQKHVEDLLTKLKEAKEQQASMEEKFHNELNAHIKLSNLYKSAADDSEAKS
NELTRAVDQLHRLLKSTGEASKGFQEHIIEVEESKDRMEKEMLEKIRKLEKELENANDLL
SATKRKGAILSEEELAAMSPTAAAVAKIVKPGMKLTELYNAYVETQDQLLLEKLENKRIN
KYLDEIVKEVEAKAPILKRQREEYERAQKAVASLSVKLEQAMKEIQRLQEDTDKANKHSS
VLERDNQRMEVQIKDLSQQIRVLLMELEEARGNHVIRDEEVSSADISSSSEVISQHLVSY
RNIEELQQQNQRLLVALRELGETREREEQETTSSKISELQVKLENALTELEQLRESRQHQ
MQLVDSIVRQRDMYRILLSQTTGVAIPLQASSLDDISLVSTPKRSSTSQTASTPAPVIEP
AEAIEAKAALKQLQEIFENYKKEKADNEKMQNEQLEKLQEQVTDLRSQNTKISTQLDFAS
KRYEMLQDNVEGYRREITSLHERNQKLTATTQKQEQIINTMTQDLRGANEKLAVAEVRAE
NLKKEKEMLKLSEVRLSQQRESLLAEQRGQNLLLTNLQTIQGILERSETETKQRLSSQIE
KLEHEISHLKKKLENEVEQRHTLTRNLDVQLLDTKRQLDTETNLHLNTKELLKNAQKEIA
SLKQHLSNMEVQLASQSSQRTGKGQPSNKEDMDDLLSQLRQAEEQVNDLKERLKTSTSNV
EQYRAMVTSLEESLNKEKQVTEEVRKNIEVRLKESAEFQTQLEKKLMEAEKEKQELQDDK
RKAIESMEQQLSELKKTLNSVQNEVQEALQRASTALSNEQQARRDCQEQAKIAVEAQNKY
ERELMLHAADVEALQAAKEQVSKMASVRQHLEETAQKAESQLLECKASWEERERMLKDEV
SKSVSRCEDLEKQNRLLHDQIEKLSDKVVSSMKEGVQGPLNVSLSEEGKSQEQILEILRF
IRREKEIAETRFEVAQVESLRYRQRVELLERELQELQDSLNAEREKVQVTAKTMAQHEEL
MKKTETMNVVMETNKMLREEKERLEQDLQQMQAKVRKLELDILPLQEANAELSEKSGMLQ
AEKKLLEEDVKRWKARNQHLVSQQKDPDTEEYRKLLSEKEVHTKRIQQLTEEIGRLKAEI
ARSNASLTNNQNLIQSLKEDLNKVRTEKENIQKELDAKIIDIQEKVKTITQVKKIGRRYK
TQYEELKAQQDKVMETSAQSSGDHQEQHVSVQEMQELKETLSQAETKSKSLENQVENLQK
TLSEKEIEARSLQEQTLELQSELARLRQDLQDRTTQEEQLRQQITEKEEKTRKAIVAAKS
KIAHLAGVKDQLTKENEELKQRNGALDQQKDELDVRMTALKSQYEGRISRLERELREHQE
RHLEQRDEPQEPTNKVSEQQRQITLKTTPASGERGIASMSDPPTANIKPTPVVSTPSKVT
AAAMAGNKSTPRASIRPMVTPATVTNPTTTPTATVMPTTQVESQEAMQSEGPVEHVPVFG
STSGSVRSTSPNVQPSIPQPILTVQQQTQATAFVQPTQQSHPQIEPTNQELSPNIVEVVQ
SSPVERPSTSTAVFGTVSATPSSSLPKRTREEEEDSTIETSDQISDDTVEMPLPKKLKSV
TPVGTEEEVMAEESTDGEVETQVYTQDSQDSIGEGVTQGDYTPMEDSEETSQSLQIDLGP
LQSDQQTASSQDGQGKGDDVIVIDSDDEEEEEDENDGEHEDYEEDEDDDDDDEDDTGMGD
EGEDSNEGTGSADGNDGYEAEGAEGGDGTDPGTETEESMGGGESNQRAADSQNSGEGNTG
TAESSFSQDISREQQPSSASERQTPRAPQSPRRPPHPLPPRLTIHAPPQELGPPVQRIQM
TRRQSVGRGLQLTPGIGGMQQHFFDDEDRTVPSTPTLVVPHRTDGFAEAIHSPQVAGVPR
FRFGPPEDMPQTSSSHSDLGQLASQGGLGMYETPLFLAHEEESGGRSVPTTPLQVAAPVT
VFTESTTSDASEHASQSVPMVTTSTGTLSTTNETATGDDGDEVFVEAESEGISSEAGLEI
DSQQEEEPVQASDESDLPSTSQDPPSSSSVDTSSSQPKPFRRVRLQTTLRQGVRGRQFNR
QRGVSHAMGGRGGINRGNIN
NT seq
7083 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggtgttgcagcaggtcctggagcgcacggagctgaacaagctgcccaagtcc
gtccagaacaaacttgagaagtttcttgctgaccagcagtccgagatcgacggcctgaag
gggcggcatgagaaatttaaggtggagagcgaacaacagtactttgagattgagaagaga
ctgtcccacagtcaggagagacttgtgaatgaaacccgagagtgtcaaagcctgcggctt
gagctagagaagctcaacagtcaattgaaggcacttaccgagaaaaacaaggaacttgaa
gttgctcaggatcgcaatattgccattcagagccagtttacaaggacgaaggaagaattg
gaagctgagaaaagagatttaattagaaccaatgagagactatctcaagaacttgaatat
ttaacagaggactttaaacgactaaacgaaaaatttaaggaaagcaatgcaacaaagggt
gagcttcagttaaaactggatgaacttcaagcttctgatgtttctgttaagtatcgagaa
aagcgcttagagcaagaaaaggagttgttacataatcagaatacttggctcaatacagag
ttgaaaaccaaaactgatgaacttctggctctcggcagagaaaaaggaaatgaaattcta
gagcttaaatgtaatcttgaaaacaaaaaagaggaggtttctagaatggaagaacagatg
aatggcctgaaagcatcaaatgagaatcttcaaaagcatgtggaggatctgttgaccaaa
ctgaaagaggccaaggaacagcaggctagtatggaagagaaattccacaatgaattaaat
gctcacataaaactctctaacctttacaagagtgctgctgatgattcagaggcaaagagc
aatgaactgacccgagcagtggaccagctacacagacttttgaagtcaactggagaagcc
agtaaaggatttcaagaacatatcatagaggtggaagaatctaaagatcgaatggaaaaa
gaaatgcttgaaaaaataaggaaattagagaaggaattagagaatgcaaatgacctgctt
tctgccacaaaacgtaaaggggccatcttatctgaagaagagcttgcagccatgtctcct
actgcagctgctgtagccaagatagtgaaacctggcatgaagttaactgagctgtataat
gcttatgtggaaactcaggatcagctgcttttggagaaactagaaaacaaaagaattaat
aagtatctagatgaaatagtgaaagaagttgaagccaaagcaccaattttgaaacgccaa
cgtgaggagtatgagcgtgcgcagaaagctgtggcaagtttatccgttaagcttgaacaa
gccatgaaggagattcagcgattgcaggaggacacagataaagccaataaacattcatct
gtgcttgaaagagacaatcaaagaatggaagtacaaataaaagatctttcacaacagatt
agagtgcttctgatggaacttgaagaagcaaggggtaaccatgtaatccgtgatgaagaa
gtaagctctgctgatataagtagttcatctgaagtaatatcacagcatctagtatcctat
agaaacattgaagagcttcaacagcaaaatcaacgtctcttagtggcccttcgggaactt
ggggaaaccagagaaagagaagaacaagaaacaacttcatccaaaatttctgagcttcag
gtcaaacttgagaatgccctcactgaattggaacaactccgtgaatcacggcaacatcaa
atgcagcttgttgattctatagttcgtcagcgtgatatgtaccgaattctgttgtcacag
acaacgggagttgccattcctttacaggcttcaagcttagatgatatttctcttgtgtca
actccaaaacgttcaagtacatcacagactgcttccactcctgctccagtaattgagcca
gcagaggctatagaagctaaggctgcacttaaacagctgcaggaaatttttgagaactac
aaaaaagaaaaggcagataatgaaaaaatgcagaatgagcagcttgagaaacttcaggag
caagtcacagatttgcgatcacaaaataccaaaatctctacccagctagactttgcttct
aaacgttatgaaatgctacaagataatgttgaaggataccgtcgagaaataacatcccta
catgaaagaaatcagaaactcactgcaacgactcagaagcaagaacagatcatcaacaca
atgacgcaagatttgagaggagctaatgaaaagctagctgttgcagaagtaagagcagaa
aatctgaaaaaggaaaaggaaatgcttaaattgtcagaagtccgtctttctcagcaaaga
gaatctttgttggccgaacaaagagggcaaaacttactgcttactaatctgcaaacaatt
cagggaatattagagcgatctgaaacagaaaccaaacaaaggcttagtagccagatagaa
aaactggaacatgaaatatcccatctaaagaagaagttggagaatgaggtggaacagagg
catacacttactagaaatctggatgttcaacttttagatacaaagagacagctggatact
gagacaaatcttcatcttaacacaaaagaactgttaaaaaatgctcaaaaggaaattgct
tcattgaaacaacacctcagtaatatggaagtccagcttgcttctcagtcttcacagaga
actggtaaaggtcagcctagcaacaaagaagatatggatgaccttctgagccagctaagg
caggcagaagagcaggtgaatgacttgaaggaaagactcaaaacaagcactagtaatgtg
gaacagtatcgtgcaatggttactagtttggaagagtccctcaacaaggagaaacaggtg
acagaagaagttcgtaagaatattgaagttcgcttaaaagagtcagccgagttccagaca
cagctggagaagaagctgatggaggcagagaaggagaaacaggaactgcaggatgacaag
agaaaagccatagagagcatggagcaacagttatctgagttaaagaaaacactcaatagt
gttcagaatgaagtacaagaagctcttcagagagcaagcacagctttgagtaatgaacag
caagccagacgggactgtcaggaacaagctaaaatagctgtggaagctcagaataagtat
gagagagaattgatgctgcatgctgctgatgttgaagctctccaagctgccaaggaacag
gtttccaaaatggcctcagtgcgtcagcatttggaagaaacagcccaaaaagcagaatca
cagttgttggaatgtaaagcatcttgggaagaaagagagagaatgttaaaggatgaagtt
tctaagagtgtgtctcgctgtgaagatctagaaaaacaaaacaggttacttcatgatcag
attgaaaaattaagtgacaaagtcgtttcctcaatgaaggaaggtgtacaaggtccattg
aatgtatctctcagtgaagaaggaaaatctcaagaacaaattttagaaattctcagattt
atacgacgagaaaaagaaattgctgaaactagatttgaagtggctcaagttgagagcctg
cgatatcgacaaagggttgaacttttagaaagagagctgcaggaacttcaggatagccta
aatgctgaaagggagaaagttcaggtaactgcaaaaacaatggcccagcatgaggaactg
atgaagaaaaccgaaacaatgaacgtagtcatggagaccaataagatgctgagagaagag
aaggagaggctggaacaggatctacagcagatgcaagccaaggtcaggaaactggagtta
gatattttacccttacaagaagcaaatgctgagctgagtgagaaaagtggtatgttgcaa
gcagagaagaagttattagaagaagatgtcaaacgttggaaagcacgtaaccagcatcta
gtgagtcaacagaaagatccagatacagaagagtatcgtaagctgctttctgaaaaggaa
gttcacactaagcgtattcagcaattgactgaagaaattggaagacttaaagctgaaatt
gcaagatcaaatgcatctttgactaacaaccagaacttaatccagagtctaaaggaagat
ttaaataaagtaagaacagaaaaggaaaatatccagaaggagttagatgccaaaataatt
gatattcaagaaaaggttaaaactattactcaagtcaagaaaattggacgtaggtacaag
actcaatatgaagaacttaaagcacaacaagataaggtcatggagacctcagctcagtct
tctggagaccatcaggaacagcacgtctcagtccaggaaatgcaggagctcaaagagaca
ctaagccaagctgaaaccaagtcaaagtcactcgagaatcaagtggagaacctgcagaag
actttatctgagaaagagatagaagcaagaagtctccaggaacagactctggagcttcag
tctgaacttgcacgacttcgtcaggaccttcaagatagaaccacacaggaagagcaactc
cgacagcagataactgaaaaggaagaaaaaacaagaaaggccattgtagcagcaaaatca
aaaattgcacatttagctggtgtaaaagatcagctaactaaagaaaatgaagagcttaaa
caaaggaatggagccttagatcagcagaaagatgaactggatgttcgtatgactgctctt
aagtcccagtatgaaggtcgaattagtcgcttggagagagaactcagggagcatcaagag
agacaccttgagcaaagagacgagcctcaggaacctaccaataaggtatcagaacagcag
agacagatcacattgaaaacaactccagcttctggtgaaagaggaattgccagcatgtca
gacccaccaacagccaatatcaagccaacccctgttgtgtctactccaagtaaagtgaca
gctgcagctatggctgggaataagtcaacacctagagctagtatccgcccaatggttaca
cctgcaactgttacaaatcctactactaccccaacagccacagtgatgcccactacacaa
gtggaatcacaggaagctatgcagtcagaagggcccgtggagcatgttccagttttcgga
agcacgagtggatctgtccgttctaccagtcctaatgtccagccttctatccctcagccc
attttaactgttcagcagcaaacacaggctacagcttttgtgcagcctactcaacagagt
catcctcaaattgagcctacaaatcaagaactatccccaaacatagtggaggtggttcag
agttcgccagttgagcggccttctacttccacagcagtatttggcactgtttcagctacc
ccaagttcttctttgccaaagcgtacacgtgaagaggaagaagatagcaccatagaaaca
tcagaccagatctctgatgatacagtggaaatgcctcttccaaagaagctgaaaagtgtt
acacctgtgggaactgaggaagaagttatggcagaagaaagtactgatggagaggtagag
actcaagtatacacccaggattctcaagattccattggagaaggagtcacccagggggat
tatacaccaatggaagacagtgaagaaacctctcaatctctacagatagaccttgggcct
cttcagtcagatcaacaaacagcttcatcccaagatggtcagggcaaaggagatgatgtc
attgtaattgacagtgatgatgaagaggaggaagaggatgaaaatgatggggaacatgag
gattatgaagaagatgaagacgacgacgatgatgatgaagacgacacaggcatgggagac
gagggtgaagacagtaacgaaggcactggcagcgcggacggcaacgacggatacgaggct
gagggcgctgagggcggtgacgggactgatccaggtacagaaacagaagaaagtatgggt
ggaggtgaaagtaatcagagagcagctgattcccaaaacagtggcgaaggaaatactggt
actgcagagtcctctttttcccaggacatatctagagaacagcagccatcatcagcatct
gaaagacagaccccccgagcacctcagtcaccaagacgcccaccacacccacttccccca
agactgaccattcatgctccacctcaggagctgggaccgccagttcagagaattcaaatg
actcgaaggcagtctgtaggacgtgggcttcagttgactccaggaataggtggcatgcag
cagcatttttttgatgatgaagatagaacagtcccaagtaccccaactcttgtggtgcca
catcgtactgatggatttgctgaagcgattcattccccacaggttgctggtgttcctaga
ttccggtttgggccacctgaagatatgccacaaacgagttctagtcactctgatcttggc
caacttgcttctcaaggaggtttgggaatgtatgagacaccgcttttcctggcccatgaa
gaggagtcaggtggccgaagtgtccccactactcccctgcaagtagcagccccagtgacc
gtatttactgagagcaccacctccgatgcctcagagcatgcttctcagtctgttccaatg
gtgacaacatccactggtactttatccacaacaaacgaaacagcaacaggtgatgatgga
gatgaagtatttgtggaggcagaatctgaaggtattagttcagaagcaggccttgaaatt
gatagccagcaggaagaagagcctgttcaggcctctgatgagtcagatcttccttccacc
agccaggaccctccttccagttcttctgtagacactagcagtagtcagccgaagcctttc
agacgagtaagacttcagacgacattgagacaaggtgtccgtggtcgccagtttaacaga
cagagaggtgtgagccatgcaatgggagggcgaggaggaataaatagaggaaatattaat
taa
DBGET
integrated database retrieval system