Oryx dammah (scimitar-horned oryx): 120880549
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Entry
120880549 CDS
T07255
Symbol
PRDM2
Name
(RefSeq) PR domain zinc finger protein 2 isoform X1
KO
K11432
[histone H3]-lysine9 N-trimethyltransferase PRDM2 [EC:
2.1.1.355
]
Organism
oda
Oryx dammah (scimitar-horned oryx)
Pathway
oda00310
Lysine degradation
oda01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
oda00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
120880549 (PRDM2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oda03000
]
120880549 (PRDM2)
03036 Chromosome and associated proteins [BR:
oda03036
]
120880549 (PRDM2)
Enzymes [BR:
oda01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.355 [histone H3]-lysine9 N-trimethyltransferase
120880549 (PRDM2)
Transcription factors [BR:
oda03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
120880549 (PRDM2)
Chromosome and associated proteins [BR:
oda03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
120880549 (PRDM2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRDM2_PR
zf-C2H2
zf-C2H2_4
SET
zf-C2H2_6
zf-C2HE
zf-H2C2_2
zf-C2H2_11
zf-C2H2_ZNF462_1st
Motif
Other DBs
NCBI-GeneID:
120880549
NCBI-ProteinID:
XP_040119867
LinkDB
All DBs
Position
Unknown
AA seq
1700 aa
AA seq
DB search
MNQNAAEPVATTETLAEVPEHVLRGLPEEVRLFPSAVDKTRIGVWATKPILKGKKFGPFV
GDKKKRSQVKNNVYMWEVYYPNLGWMCIDATDPEKGNWLRYVNWACSGEEQNLFPLEINR
AIYYKTLKPIAPGEELLVWYNGEDNPEIAAAIEEERASARSKRSSPKSRRGKKKSQESKN
KANKTEDVQLKTSEPDPSPANMRDSAEGPKDEDEKPSASATEQPAVPQEAVSQDVPPELA
LPPPAHEPQTGPDAELEAALCEANEVVEEEEEEEEEELEEEGDEAADVPNESSLRELEIR
CDEKPEDLLEEPKTVSKETLEDSAEAAPVVKTPRAREEANGDVFETFLFPCQHCERKFTT
KQGLERHMHIHMSTVNHAFKCKYCGKAFGTQINRRRHERRHEAGLKRRLEDPAGSKAPSD
GAPPQDDTQPPGLGQDGLTSSSEKASQDSVTPSVVEENGEAKELHPCKYCKKVFGTHTNM
RRHQRRVHERHLIPKGVRRKGGLLEEPQPPAEQAPPAPSVYVPSTDPEEEGEADDVYIMD
ISSNISENLNYYIDGKIQTSSSTSNCDVIEMESNSADLYGINCLLTPVTVEITQNIKTTQ
VPITDDLPKEPSSSTNSESKKRRTASPPVLPKIKAETESDPATPSCSLSLPLSISTTEAV
SFHKEKSVYLSSKLKQLLQTQDKLTSPAGISAAEIPKLGPVCVSAPASMLPVTSSRFKRR
TSSPPSSPQHSPALRDFGKPGDGKAVWTEAVLSSKKPKLESHSNSPAWSLSGRDERETGS
PPGFDEYKVSNEWAASSTFSNVCNQQPLDLSSGMKQKAEGPGKAPVQWEAVLDLSVHKKP
CGDSEGKEFKENHMLQPSCSAVKKRKPTTCMLQKVLLNEYNGVDLPVENAPEASGSASPC
KPLDPQPDPDLGLNSSSSASVVESPPDVSSSSPARQPPSLSCGRLPPLLTPTTPSSPPPC
PPVLTVATPPPPLLPTVALPAPSAGVSPHPCPSPLSNATTQSPLPILSPTVSPSPSPIPS
VEPVMSGASPGPPTLSSSSSSSSSSSFSSSSSSSSPSPPPLSAVSSVVSSGDNLETSLPM
ISFKQEELESEDLKAREEAPSTTEQEIIQETFNRNFVCNVCESPFLSIKDLTKHLSIHAE
EWPFKCEFCVQLFKVKTDLSEHRFMLHGVGNIFVCSVCKKEFAFLCNLQQHQRDLHPDKV
CTHHEFESGTLRPQNFTDPSKAHVEHMQSLPEDPLEVSKEEEELNDSSEELYTTIKIMAS
GIKTKDPDVRLGLNQHYPSFKPPPFQYHHRSPLGIGVTATNFTTHNIPQTFTTAIRCTKC
GKGVDNMPELHKHILACASASDKKRYTPKKNPVPLKQTVQPKNGVVVLDNSGKNAFRRMG
QPKRLNFSVELSKMSSNKLKLNALKKKNQLVQKAILQKNKSAKQKADLKTTPESSSHVCP
YCHREFTYIGSLNKHAAFSCPKKPLSPSKKKLSHSSKKGGHPSPAASDRNNSSSHRRRTA
DAEIKMQSMQAPLGKTRARSSGPSQVPPPTSSFRSKQNVKFAASVKSKKPSSSLRNSSPI
RMAKMTHSESKKPKAAAKNHAAPLSGKTSRSLHVRAQKSRAVLQSKSALASKKRTDRFSV
KSRERSGGPITRSLQLAASADPSENRKEDGSGKQELKDLSYSLRLASRCPPPAAPYITRQ
YRNVKATAAAQLQGSLFKDT
NT seq
5103 nt
NT seq
+upstream
nt +downstream
nt
atgaatcagaacgcagctgagcctgtggcaaccacggagaccctggccgaggtacctgaa
catgtgcttcgaggacttccggaggaagtgaggcttttcccatctgctgttgacaaaact
cggattggtgtctgggccacgaaaccaattttaaaaggcaaaaagtttgggccatttgtc
ggtgacaagaaaaaaagatctcaggttaagaataatgtatacatgtgggaggtctattac
ccaaatttgggatggatgtgcattgatgccaccgatccagagaaggggaactggctgcgc
tatgtgaattgggcttgctcaggagaagagcaaaatttatttccactggaaatcaacagg
gccatttactataaaactttaaagccaatcgcgccgggcgaggagctcctggtctggtac
aatggggaagacaaccccgagatagcagctgcgattgaggaagagcgagccagcgcccgg
agcaagcggagctccccgaaaagcaggagagggaagaaaaaatctcaagaaagtaaaaac
aaagcaaacaaaaccgaagacgtacagctgaagacaagtgagccagatcccagccctgca
aatatgagagattctgcggaaggccccaaagacgaagacgagaagccttccgcttccgcc
accgagcaaccagccgtccctcaggaggccgtgagccaggatgtgcctccagagctcgcc
ctccctccccctgcccacgagccccagacaggaccagacgcggagctggaagcagcgctc
tgtgaggcgaacgaggtggtggaggaggaggaggaggaagaagaagaggagctggaagaa
gagggggatgaagcagctgatgtgccaaatgaaagttccctaagagagctggagatccgg
tgtgatgagaagcccgaggatttgttagaagaaccaaaaactgtttcaaaggaaactctc
gaagactctgcggaggcagcccctgttgtgaaaactcccagagccagagaagaggccaac
ggggacgtgtttgaaacatttctgttcccatgtcagcactgcgagaggaagttcacgacc
aagcaggggctggagcggcacatgcacatccacatgtccacggtcaaccacgccttcaag
tgcaagtactgcgggaaggcctttggcacacagatcaaccggcggcgccacgagcggcgc
cacgaggccgggctgaagcgaaggctcgaggacccggccggcagcaaggcgcccagcgac
ggtgctcctccccaggacgacacgcagccccccggtcttgggcaggatggtctgacctcg
agttcagagaaggcatcccaggactcagtgactccttccgtcgtagaagagaacggcgaa
gctaaagagcttcacccgtgcaagtactgtaagaaggttttcggcactcacacgaatatg
agacggcatcagcgcagagttcacgagcggcacctgattcccaagggggtgcggcggaaa
gggggcctcctggaagagccacagcccccagcagagcaggcccctcccgccccaagtgtc
tatgtccccagcacagacccagaggaggaaggggaggcggacgatgtatacatcatggat
atttccagcaatatctctgagaacctaaattactacattgatggtaaaattcagaccagc
agcagcaccagtaactgtgacgttattgagatggaatccaattcggcagacttgtacgga
ataaactgtctgcttactccagtcacagtggaaataactcagaacataaagaccacgcag
gtccctataactgatgatctccctaaagagccttccagcagcacaaacagcgagtccaag
aaacggaggactgctagtccacctgtgttacccaaaattaaagccgagactgagtctgat
cctgccacaccttcctgttccttgagtctgcctctcagcatatcaaccacagaggcggtg
tctttccacaaagagaaaagcgtgtatttgtcatcaaagctcaaacagcttcttcagacc
caggataaattaacttctcctgcgggaatttcagccgctgagatacccaaattaggcccc
gtctgcgtgtccgctcctgcgtcgatgctacctgtgacctcaagcaggtttaagaggcga
accagctctccccccagctctcctcagcacagccccgccctgcgagactttggaaaacca
ggagatgggaaagccgtgtggactgaggcagttctaagctccaaaaaacccaaattagag
agtcacagcaactcaccagcatggagtttgtctgggagagatgagagagaaactgggagc
ccgccaggctttgatgaatataaggtgtctaacgagtgggcagctagctctacttttagc
aatgtgtgcaaccagcagccactggatttgtccagtggtatgaaacagaaggctgagggg
ccgggcaaggctccggtccagtgggaagctgtgttagatctcagtgtgcataaaaagccc
tgtggtgactctgaaggcaaggaattcaaagaaaaccatatgctgcagccatcctgcagt
gctgtgaagaaaaggaaacccaccacctgcatgctgcagaaggtccttctcaacgaatac
aacggcgtcgacctccctgtggaaaacgctccagaggcatccggaagtgccagtccctgt
aaacctctagatcctcagccagaccccgaccttggtctcaactccagctcgtctgcctct
gttgtcgagtctcctcctgacgtttcctcgtcgtcacctgcgcggcaaccaccttccctc
tcttgtgggcggctgccgcctctcttgacccccaccaccccctcctctcctccaccctgc
ccccccgtgttaacggttgccactccgccccctccgctgcttcctactgtcgctcttcca
gccccctctgctggggtgtccccccacccgtgtccctccccactctcgaatgccaccaca
cagtccccacttccaattctctccccgacggtgtctccctcgccgtcccccattccctcc
gtggagcctgttatgtccggtgcttcaccggggcctccaacgctctcctcgtcttcctcc
tcttcttcctcctcttccttctcatcttcctcctcctcctcttccccttcaccgcctcct
ctctcagcagtgtcatccgtggtttcctctggagataatctggaaacctctctccccatg
atatcttttaagcaggaggaactagagagtgaagacctgaaagccagggaggaagcccca
tccaccactgagcaggagatcatccaggaaacattcaacagaaactttgtctgcaatgtc
tgtgaatcaccttttctttccattaaggatctaaccaaacatttatccattcacgctgag
gaatggcccttcaaatgtgaattttgtgtgcagctcttcaaggtgaaaactgatttgtca
gaacatcgctttatgcttcacggcgttgggaatatctttgtgtgttcagtttgtaaaaag
gagtttgcattcttgtgcaatctgcagcagcaccagcgagatctccacccggataaggtg
tgcacgcaccatgagtttgaaagcggcaccctgaggccccagaactttacggatcccagc
aaggcccatgtcgagcacatgcagagtttgccggaagaccctctagaagtgtctaaagaa
gaagaggagttgaacgattcttccgaagagctttacacgaccatcaaaataatggcttcc
ggaataaagacaaaggatccagatgttcgattgggtctcaaccaacattacccaagcttt
aaaccacccccatttcagtaccatcaccgcagccccctgggcattggtgtgacggccaca
aacttcactacgcacaacatcccacagacatttaccaccgccatccgctgcaccaagtgc
gggaaaggcgtggacaacatgcctgaactgcacaaacacatcctggcatgtgcctctgcg
agtgacaagaagaggtatacccccaagaaaaacccggtcccactgaagcagactgtgcaa
cccaaaaatggcgtggtggttctggacaactctgggaaaaacgccttcagacgaatgggc
cagcccaaaagactgaactttagtgtggagctcagcaaaatgtcctcgaataagctcaag
ttaaacgcattgaagaaaaagaaccagctcgtccagaaagcaatcctacagaaaaacaag
tccgcaaagcaaaaggctgacctaaaaaccactcccgagtcgtcctcgcacgtctgccca
tactgccacagagagttcacgtacatcgggagcctgaacaagcacgctgctttcagctgt
cccaaaaaacctctttctccttccaaaaaaaaactttcccactcttccaagaaagggggg
cacccgtcacctgccgcgagtgacagaaacaacagcagtagccaccgcagacggacagca
gacgccgagatcaaaatgcagagcatgcaggcacctctgggcaagaccagagctcgcagc
tcgggcccctcacaggtcccaccacccacctcgtccttcaggtccaagcagaacgttaaa
ttcgccgcttcggtcaagtccaaaaaaccaagctcctctttaaggaactcgagccccata
cgaatggccaaaatgactcacagcgagagcaagaagcccaaagctgcagccaagaaccat
gcagctcccctctcaggcaagacgtcgaggagcctgcatgtgcgggcgcagaagagcaga
gccgtcttacagagtaagtcggccttggccagtaagaaacggacagacaggttcagtgta
aaatccagagaacggagtggggggccgatcacccgaagcctgcagctggcggcttctgcc
gaccccagtgagaacaggaaggaggacgggagtggcaagcaggagctgaaggacctcagc
tacagtctccgcctggcatcccgatgtcctccgccagccgccccgtacatcaccagacag
tataggaatgtcaaggccacagccgcggcccagctccagggatccctcttcaaagacacc
tga
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