Oryx dammah (scimitar-horned oryx): 120880833
Help
Entry
120880833 CDS
T07255
Name
(RefSeq) NPC intracellular cholesterol transporter 1
KO
K12385
Niemann-Pick C1 protein
Organism
oda
Oryx dammah (scimitar-horned oryx)
Pathway
oda03265
Virion - Ebolavirus, Lyssavirus and Morbillivirus
oda04142
Lysosome
oda04979
Cholesterol metabolism
Brite
KEGG Orthology (KO) [BR:
oda00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
120880833
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
120880833
09150 Organismal Systems
09154 Digestive system
04979 Cholesterol metabolism
120880833
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
oda02000
]
120880833
Transporters [BR:
oda02000
]
Solute carrier family (SLC)
SLC65: NPC-type cholesterol transporter
120880833
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NPC1_MLD
Sterol-sensing
NPC1_N
Patched
MMPL
PRIMA1
TMEM51
Motif
Other DBs
NCBI-GeneID:
120880833
NCBI-ProteinID:
XP_040120172
LinkDB
All DBs
Position
Unknown
AA seq
1243 aa
AA seq
DB search
MSVRGPALGLLLLLFCPAQVFSQSCIWYGECGIASGDKRYNCRYSGPPKPLPQDGYDLVQ
ELCPGFFFGNVSLCCDVQQLHTLKDNLQLPLQFLSRCPSCFYNLVNLFCELTCSPRQSQF
LNVTATEDYVDPTTNQTKTNVKELQYYVGESFANGKYTTLVIKFFLIDILNTLLPTDLPT
HGMQPMNNATKGCDESVDEVTGPCSCQDCSAVCGPKPQPPPPPVPWRILGLDAMYVIMWS
TYMAFLLVFFGAFFAVWCYRKRYFVSEFTPIDGNIPFSINASDKGGPTCCDPLGAALEAH
LRRLFERWGSFCVRHPGCVVFFSVAFIAACSSGLVFIQVTTDPVDLWSAPGSQARQEKEY
FDTHFGPFFRTEQLIIRAPHTPPHTYEPYPSGADVPFGPPLAIDILHQVLDLQTAIESIT
ASYNNETVTLRDICVAPLSPYNQNCTVLSVLNYFQNSHSVLDHQVGDDFFVYADYHTHFL
YCVRAPASLNDTSLLHDPCLGTFGGPVFPWLVLGGYDDQNYNNATALVITFPVNNYYNDT
EKLQRAQAWEREFINFVKNYENPNLTISFKAERSIEDELNRESNSDVFTVLISYGIMFLY
ISIALGHIKRCRRLLVDSKISLGIAGVLIVLSSVACSLGIFSYIGVPLTLIVIEVIPFLV
LAVGVDNIFILVQTYQRDERLQGETLDQQVGRVLGEVAPSMFLSSFAETVAFFLGGLSVM
PAVHTFSLFAGMAVLIDFLLQITCFVSLLGLDIKRQEKNQLDVLCCVRGAADDTGIQASE
SCLFRFFRNSYAPLLLKDWMRPLVVAVFVGVLSFSIAVLNKVEIGLDQSLSMPDDSYVTD
YFRSLNQYLHAGPPVYFVLEEGHDYTSTEGQNMVCGGLGCNNNSLVQQVFTAAQLDSYTR
IGFAPSSWIDDYFDWVKPQSSCCHIYNSTEQFCNASVVDPACVRCRPLTPEGKQRPQGTD
FMRFLPMFLSDNPNPKCGKGGHAAYSAAVNIVDNGTSVGATYFMTYHTVLQTSADFIDAM
EKARLIANNITRTMNQQGGDHRVFPYSVFYVFYEQYLTMIDDTIFNLGVSLGAIFLVAVG
LLGCDLWSAGLMCATIAMILVNMFGVMWLWGISLNAVSLVNLVMSCGISVEFCSHITRAF
TVSTKGSRVERAEEALSHMGSSVFSGITLTKFGGIIVLAFAKSQIFQIFYFRMYLAMVLL
GATHGLIFLPVLLSYIGPSINKAKSLTMQQRYRGTEREQLLNF
NT seq
3732 nt
NT seq
+upstream
nt +downstream
nt
atgagcgtgcgcggcccagccctcggcctcctcctgctgctgttctgtccggcgcaggta
ttttcacagtcctgcatttggtatggagagtgtggaatcgcatctggagataagagatac
aactgcagatattctgggccaccaaagccattgccacaggacggctatgacctagtgcag
gagctctgtcctgggttcttctttggcaatgtcagtctttgctgtgatgtccagcagctt
cacacactgaaagacaacctgcagctgcctctgcagtttctgtccagatgtccatcctgt
ttttataacctagtgaacctgttctgtgagctgacatgtagccctcgacaaagtcagttt
ctgaatgttacagcaactgaagattatgttgatcctactacaaaccagacgaaaacaaat
gtaaaagaattacagtactatgttggagagagttttgccaatggtaagtatacaaccctt
gtaattaaattttttttaatagatattcttaacacactccttcctacagatcttccgacg
catgggatgcagcccatgaacaatgccaccaagggctgtgacgagtcggtggacgaggtc
accgggccgtgcagctgccaggactgctcggctgtctgcggccccaagccccagcccccg
ccccctcccgttccctggagaatcctgggtctcgacgccatgtacgtcatcatgtggagc
acctacatggctttcctgctcgtgttttttggagcgttctttgctgtgtggtgctacaga
aaacggtattttgtctctgagtttacccccattgatggcaatatacctttctctataaac
gccagtgacaaaggggggccaacctgctgtgaccctctgggtgccgccttggaggcgcat
ctgcggcggctctttgaacggtggggctccttctgtgtgaggcaccccggctgtgtcgtg
ttcttctccgtggccttcatcgccgcctgttcctcaggcctggtgttcatccaggtcaca
accgacccggtggacctctggtcggcccccggcagccaggcgcgccaggagaaggagtac
ttcgacacacacttcgggcccttcttccgcaccgagcagctcatcatccgggccccccac
accccgccgcacacatatgagccctacccctccggagccgacgtgcccttcgggcctccc
ctcgccatagacattctgcaccaggtccttgacttacaaaccgccatcgagagcatcact
gcttcttacaacaacgagactgtgaccctgcgtgacatctgcgtagcgcccctctcgcca
tacaaccagaactgcaccgtcctgagcgtgctgaactacttccagaacagccactccgtg
ctggaccatcaggtcggggacgacttcttcgtgtatgcggattaccacacgcacttcctc
tactgtgtccgggctcctgcttccctgaatgacaccagtttgctccacgatccttgcctg
gggacgtttggtggcccagtgttcccatggcttgtgcttggaggctatgatgatcaaaac
tacaataacgccacagcccttgtgatcacttttcctgtcaataattactataacgataca
gagaagctccagagggcccaggcctgggaaagagagttcattaattttgtgaaaaactac
gagaatccaaatctgaccatttcttttaaggctgaacgaagcattgaagatgaactaaac
cgtgaaagtaacagtgacgtcttcactgttctgatcagctatggcatcatgtttttatat
atttccatagccttggggcatatcaaaaggtgtcgcaggcttctggtggattcgaaaatc
tccctgggcattgccggtgtcctgatagtgctgagctcagtggcctgctccttgggcatc
ttcagctacatcggggtccccctgaccctcattgtgatagaagtcatcccattcctcgtg
ctggctgtgggcgtggacaacatcttcatcctggtccagacctaccagagagatgaacgt
cttcaaggggaaaccctggaccaacaggtgggccgggtcctgggagaagtggctcccagc
atgttcctctcatccttcgccgagacggtagcgtttttcttaggaggcctgtccgtgatg
ccggccgtgcacacgttctctctcttcgcgggcatggcggtcctcatcgacttcctcctg
cagatcacctgctttgtgagcctcctgggcttggacattaagcggcaagagaagaaccag
ctggacgttctctgctgtgtcaggggggcggcagacgacacaggcatccaggcctctgag
agctgcttgttccgcttcttcagaaactcctacgccccgcttctgctcaaggactggatg
cggccccttgtggtagcagtatttgtgggtgtgctgtcattcagcatcgcagtcctgaac
aaagtagagatcggattggatcaatctctctcaatgccggatgactcctacgtgacggat
tacttccggtccctgaatcagtacctgcacgcaggcccacctgtgtacttcgtgctggag
gagggccacgactacacatccacggagggtcagaacatggtgtgtgggggcctcggctgc
aacaacaactcactggtgcagcaggtcttcacggccgcccagctggacagctacacccgg
ataggctttgccccgtcgtcctggattgacgattactttgactgggtcaagcctcaatca
tcttgctgtcacatctacaacagcacggagcagttctgcaatgcgtcggtggtcgaccct
gcctgtgtccgctgccggccactgactccagagggcaagcagagacctcagggcacagac
ttcatgaggttcctgcccatgttcctctccgacaacccgaaccccaagtgtggcaaaggg
ggacatgctgcctacagcgctgccgtcaacatcgtggacaacggcacgagcgtgggagcc
acatacttcatgacctaccacacggtgctgcagacctcggctgacttcatcgatgccatg
gagaaggcccgcctcatcgccaacaacatcaccaggaccatgaaccagcaaggcggtgat
caccgggtgttcccatacagcgtgttctacgtcttctatgagcagtacctgaccatgatt
gacgacaccatcttcaacctcggcgtgtccctgggcgccatcttcctggtggccgtgggc
ctcctgggctgtgacctgtggtctgcgggcctcatgtgtgccaccatcgccatgatcctc
gtcaacatgttcggcgtcatgtggctgtggggcatcagcctgaacgcggtttctctggtc
aacctggtcatgagctgcggcatctccgtggagttctgtagccacatcacgagggcgttc
acggtgagcacgaagggcagccgcgtggagcgggcagaggaggcgctctcccacatgggc
agctctgtattcagtggaatcacactaacaaaatttggaggcattattgtgttggccttt
gccaaatctcaaattttccagatattttacttcaggatgtatctagctatggtcttactg
ggagccactcatggactaatattcctccctgtcttactcagttacataggcccgtcaata
aataaagccaaaagtttgaccatgcagcagcgatacagaggtacagagcgagaacagctc
ctcaacttctag
DBGET
integrated database retrieval system
