Oryx dammah (scimitar-horned oryx): 120880902
Help
Entry
120880902 CDS
T07255
Symbol
WDR7
Name
(RefSeq) WD repeat-containing protein 7 isoform X1
KO
K24738
rabconnectin-3b
Organism
oda
Oryx dammah (scimitar-horned oryx)
Pathway
oda04142
Lysosome biogenesis
Brite
KEGG Orthology (KO) [BR:
oda00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome biogenesis
120880902 (WDR7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oda04131
]
120880902 (WDR7)
Membrane trafficking [BR:
oda04131
]
Endosome - Lysosome transport
Acidification regulators
Rabconnectin-3 complex
120880902 (WDR7)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR3_1st
Beta-prop_WDR5
Beta-prop_IFT122_1st
Beta-prop_THOC3
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
WD40_CDC20-Fz
Beta-prop_WDR36-Utp21_1st
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR3_2nd
WD40_Gbeta
Beta-prop_EML
CFAP251_N
WDR55
ASA1
EIF3I
ANAPC4_WD40
Beta-prop_NOL10_N
WD40_MABP1-WDR62_2nd
Beta-prop_VPS8
DSE1_N
Beta-prop_HPS5
Beta-prop_Aladin
Beta-prop_IFT140_1st
WD40_MABP1-WDR62_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_ACSF4
Beta-prop_SCAP
PAC11
WDR72_alpha-sol
Beta-prop_WDR19_1st
Beta-prop_Vps41
PEP5_VPS11_N
WDR90_beta-prop_4th
Ge1_WD40
Tricorn_2nd
PD40
LRS4
AMN1_helical
Motif
Other DBs
NCBI-GeneID:
120880902
NCBI-ProteinID:
XP_040120253
LinkDB
All DBs
Position
Unknown
AA seq
1487 aa
AA seq
DB search
MAGNSLVLPIVLWGRRAPTHCISAVLLTDDGATVATGCHDGQICLWDLSVDLDVNPRALL
FGHTASITCLSKACASSDKQYIVSASESGEMCLWDVNDGRCIEFTKLACTHTGIQFYQFS
VGSQREGRLLCHGHYPEILVVDATSLEVLYSLVSKISPDWISSMSIIRSHRTQEDTVVAL
SVTGILKVWIVTSEISDLQDTEPIFEEESKPIYCQNCQSISFCAFTQRSLLVVCSKYWRV
FDAGDYSLLCSGPSENGQTWTGGDFVSADKVIIWTENGQSYIYKLPASCLPASDSFRSDV
GKAVENLIPPVQHSLLDRTDKESLICPPVTRFFYGCKEYFHRLLIQGDSSGRLNIWNISD
TPDRPAGLEMTTSISLQEAFDKLSPCPAGIIDQLSVIPNSNEPLKVTASVYIPAHGRLVC
GREDGSIIIVPATQTAIVQLLQGEHMLRRGWPPHRTLRGHRNKVTCLLYAHQVSARYDQR
YLISGGVDFSVIIWDIFSGEMKHIFCVHGGEITQLLVPPENCSARVQHCICSVASDHSVG
LLSLREKKCIMLASRHLFPIQVIKWRPSDDYLVVGCSDGSVYVWQMDTGALDRCVMGITA
VEILNACDEAAPAAVDSLSHPAINLKQAMTRRSLAALKNMAHHKLQTLATNLLASEASDK
GNLPKYSHNSLMVQAIKTNLTDPDIHVLFFDVEALIIQLLTEEASRPNTTLISPENLQKA
SGSSDKGGSFLTGKRAAVLFQQVKETIKENIKEHLLDDEDEDEEAVRQRREDSDPEYRAS
KSKPLTLLEYNLTMDTAKLFMSCLHAWGLNEVLDEVCLDRLGMLKPHCTVSFGLLSRGGH
MSLMLPGYNQAACKLSRGKAEVGRKLVATEGVGKGTYGLSRAVTTQHLLSVISLANTLMS
MTNATFIGDHMKKGPTRPPRPSTPDLSKARGSPATSSLIVQGQIKQVAAPVVSARSEADQ
SGSDPASTPALHTCFLVNEGWSQLAAMHCVMLPDLLGLDKFRPPLLEMLARRWQDRCLEV
REAAQALLLAELRRIEQAGRKEAIDTWAPYLPQYMDHVISPGVSAEAMQTITTAPDASGP
EAKVQEEEHDLVDDDITTGCLSSVPQMKKISTSYEERRKQATAIVLLGVIGAEFGAEIEP
PKLLTRPRSSSQIPEGFGLTSGGSNYSLARHTCKALTFLLLQPPSPKLPPHSTIRRTAID
LIGRGFTVWEPYMDVSAVLMGLLELCADAEKQLANITMGLPLSPAADSARSARHALSLIA
TARPPAFITTIAKEVHRHTALAANTQSQQNMHTTTLARAKGEILRVIEILIEKMPTDVVD
LLVEVMDIIMYCLEGSLVKKKGLQECFPAICRFYMVSYYERNHRIAVGARHGSVALYDIR
TGKCQTIHGHKGPITAVAFAPDGRYLATYSNTDSHISFWQMNTSLLGSIGMLNSAPQLRC
IKTYQVPPVQPASPGSHNALRLARLIWTSNRNVILMAHDGKEHRFMV
NT seq
4464 nt
NT seq
+upstream
nt +downstream
nt
atggcaggaaacagcctcgtgctgcccattgtcctttggggccgcagagccccgacgcac
tgcatttcagccgtgctgctgacggacgacggggccacggtcgcgaccggctgccacgac
gggcagatatgcctctgggacctttccgtggacttggacgtcaatcctcgagcactgttg
tttggtcacacagcgtcaatcacctgtttgtctaaagcttgtgcgtctagtgacaaacag
tatattgtgagcgcatctgagagtggggagatgtgcctctgggacgtgaatgatggcaga
tgtattgaatttacaaaattagcttgcacacatactggcatacagttctaccagttctct
gttggaagtcagagagaaggaaggcttctgtgccacggtcattatcctgaaatccttgtg
gtggatgccaccagccttgaagtgttgtactccttagtctcaaagatctctccagactgg
atcagctccatgagtattattcgatcccaccgaacacaagaggacaccgtggtggcactc
tcagtgacgggcatcttgaaggtgtggattgtaacctcggaaataagtgacctgcaggat
actgagccaatatttgaggaagaatccaaaccgatttactgtcagaactgccaaagcatc
tctttctgtgctttcacacaaaggtcacttttggtggtatgctccaagtattggagggta
tttgatgctggagactactccctgttgtgctcgggtccgagtgaaaacgggcagacgtgg
acgggaggtgactttgtctcagctgataaagtcatcatctggactgaaaatgggcagagt
tatatttacaaactacctgccagttgccttccagctagtgattcattccgcagtgatgtg
gggaaagcagttgaaaatttaattcctccagtacaacatagcctattggatcggacagat
aaagagtcgctaatttgtcctcctgtgactcgattcttctatggatgcaaagaatacttc
cacagactattaattcagggtgattcttctggaagattgaatatttggaacatatcagac
acacctgatagacctgcagggctggaaatgaccacgtctattagtttgcaagaagcattt
gataaactgagtccatgtcctgctggaattatagatcagctgagcgtgatccccaatagt
aacgagcctcttaaggtgacggcaagtgtgtacataccagcccacggacgactcgtctgt
ggccgtgaagatggaagcatcattatcgtccccgccacgcagacggccatagtgcagctg
ttgcaaggcgagcacatgctccgcagaggctggccgcctcacaggacactccgtggccat
cggaacaaagtcacatgtttgctgtacgctcatcaggtctcagcccgttatgatcaaaga
tatctcatatctggaggcgtggatttctcggtcatcatttgggacatattttctggagaa
atgaaacatatcttctgtgtccatggtggcgagatcactcagcttctagttccacctgaa
aactgtagtgcaagagtgcagcactgcatctgttctgtagccagtgaccactcagtcgga
cttctaagtttgcgagagaaaaaatgcattatgctggcgtctcgtcatcttttccccatt
caagtaatcaagtggaggccttctgacgattacctagtagtgggatgttcagacggctcc
gtgtatgtctggcaaatggatactggagcgctggaccggtgtgtgatggggatcacagct
gtggagatcctgaacgcctgtgatgaagcagcccctgctgctgttgactcgctgagccac
ccggcgatcaacctcaaacaggccatgacacgccgcagccttgctgctctgaagaacatg
gcccatcacaagctgcagactcttgccactaacctcctggcttctgaggcatctgacaaa
ggaaatttacctaaatattctcataactccctgatggttcaagcaataaagacaaaccta
acagacccggacattcacgtgctcttctttgatgtggaagcgctgattattcagctcttg
actgaagaagcctctaggccgaacacgacgcttatttccccagagaatctgcagaaagca
tctggcagttcagacaaagggggctcttttctaaccggaaaacgagcagcagtcctcttc
caacaagtgaaggaaaccatcaaagagaacataaaggagcacctcctggacgacgaagac
gaggacgaagaggcggtgcggcagaggcgggaggacagcgacccggagtatcgggccagc
aagtccaagccgctgaccctgctggagtacaacctgacgatggacaccgcgaagttgttc
atgtcctgcctccacgcctggggtttgaacgaggtcctggacgaagtgtgtctcgaccgc
ctggggatgctgaaaccccactgcacagtgtcgtttggcctcttatcccgaggaggtcac
atgtccctgatgcttcccggctataaccaggcggcttgtaaactgtcccgcgggaaagcc
gaagtgggaaggaagctggtggccaccgagggcgttgggaaggggacctacggcttgtcc
cgggccgtcaccacgcagcatctcctgtctgtcatatctttggcaaataccttgatgagt
atgaccaatgcaacttttattggtgatcatatgaagaagggccctaccaggccacctaga
ccaagcaccccagacctttctaaggcaaggggttcccctgcaacttccagtcttattgtg
caaggacagattaaacaagtggctgcacctgtcgtttccgctcggtctgaggctgatcag
tctggctctgaccctgcttccactcctgctttacatacctgtttcttagtaaatgaagga
tggagtcagttggctgccatgcattgcgttatgctgccagatctgctgggattggacaag
ttcaggcccccgcttctagagatgctggctcggagatggcaagatcgatgcttggaggtc
agagaagctgcacaggccctgcttctagccgaactgagaagaattgagcaggcgggacgg
aaggaggccattgatacctgggctccttacttacctcagtacatggaccacgtcatatca
ccgggggtctcagcagaagccatgcagacgatcaccactgctcctgatgcctccgggcca
gaagccaaagtccaggaggaggagcacgaccttgtggatgatgacatcacgactggttgc
ttatcaagtgtcccacaaatgaagaaaatttccacatcttatgaggaaagacggaagcaa
gctactgctattgttttactaggagtaataggagctgaatttggtgctgaaattgaacct
cctaaactgttgaccagacctcgaagctctagtcagattcctgaaggatttggtttgact
agtggtggatccaactactcactggccagacacacttgtaaggccctgacatttcttctg
ctgcagccaccaagccctaagcttcctccacacagtaccatccgcagaacagccattgat
ctgattggacgtggtttcacagtctgggagccttacatggatgtgtctgctgtccttatg
gggcttctcgaactttgtgctgatgccgagaaacaacttgccaacatcacaatggggctg
cctttgagccctgccgccgactccgcccgctccgcccggcatgccctctccctcattgcc
acggccagaccacccgccttcatcaccaccatcgccaaagaggtgcacagacacactgct
ctcgctgcaaacacccagtctcaacagaatatgcacaccaccactcttgcccgagcaaaa
ggagagattctgagagtcattgaaattcttatcgaaaagatgcccacagatgtcgtggat
cttcttgtggaggttatggacatcattatgtactgcctcgaaggatctttagttaaaaag
aaaggtcttcaggaatgttttccagccatctgcaggttctacatggtcagctattatgag
cggaatcacagaatagccgttggagctcgccacggttcagtggccctgtacgacattcgg
actggaaaatgtcagacaatccatggacacaagggaccaatcactgcagtggcctttgcc
ccggatggacggtatcttgccacctactcgaacacggacagccacatttctttctggcag
atgaacacgtccctgctggggagcatcggcatgctgaactcggcgccccagctgcgctgc
atcaagacctaccaggtgcccccggtgcagcccgcctcccccggctcgcacaacgccctg
cggctggcccggctcatctggacctcgaaccgcaacgtcatcctcatggcgcacgacggc
aaggaacaccgcttcatggtctag
DBGET
integrated database retrieval system
