Oryx dammah (scimitar-horned oryx): 120881124 Help Entry 120881124         CDS       T07255                                  Symbol COL6A1 Name (RefSeq) collagen alpha-1(VI) chain   KO K06238   collagen type VI alpha Organism oda  Oryx dammah (scimitar-horned oryx) Pathway oda04151   PI3K-Akt signaling pathway oda04510   Focal adhesion oda04512   ECM-receptor interaction oda04518   Integrin signaling oda04820   Cytoskeleton in muscle cells oda04974   Protein digestion and absorption oda05165   Human papillomavirus infection Brite KEGG Orthology (KO) [BR:oda00001]  09130 Environmental Information Processing   09132 Signal transduction    04151 PI3K-Akt signaling pathway     120881124 (COL6A1)   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     120881124 (COL6A1)    04518 Integrin signaling     120881124 (COL6A1)  09140 Cellular Processes   09144 Cellular community - eukaryotes    04510 Focal adhesion     120881124 (COL6A1)   09142 Cell motility    04820 Cytoskeleton in muscle cells     120881124 (COL6A1)  09150 Organismal Systems   09154 Digestive system    04974 Protein digestion and absorption     120881124 (COL6A1)  09160 Human Diseases   09172 Infectious disease: viral    05165 Human papillomavirus infection     120881124 (COL6A1)  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    04147 Exosome [BR:oda04147]     120881124 (COL6A1)    00536 Glycosaminoglycan binding proteins [BR:oda00536]     120881124 (COL6A1) Exosome [BR:oda04147]  Exosomal proteins   Exosomal proteins of other body fluids (saliva and urine)    120881124 (COL6A1) Glycosaminoglycan binding proteins [BR:oda00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    120881124 (COL6A1)  Hyaluronan   Extracellular matrix or blood plasma proteins    120881124 (COL6A1) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  VWA Collagen VWA_2 VWA_CoxE Motif Other DBs NCBI-GeneID:  120881124 NCBI-ProteinID:  XP_040120647 LinkDB All DBs Position Unknown AA seq 1027 aa AA seqDB search MRLPRALLPLLLQACWASAQDDPVASRAIAFQDCPVDLFFVLDTSESVALRLKPYGALVD KVKSFTKRFIDNLNDRYYRCDRNLVWNAGALHYSDEVEIIRGLTRMPSGRDALKSSVDAV KYFGKGTYTDCAIKKGLEELLVGGSHLKENKYLVVVTDGHPLEGYKEPCGGLEDAVNEAK HLGIKVFSVAITPDHLEPRLSIIATDHTYRRNFTAADWGQSRDAEEVISQTIDTITDMIK NNVEQVCCSFECQPARGPPGPRGDPGYEGERGKPGLPGEKGEAGDPGRPGDLGPVGYQGM KGEKGSRGEKGSRGPKGYKGEKGKRGMDGVDGMKGETGYPGLPGCKGSPGFDGVQGPPGP KGDAGAFGLKGEKGEPGADGEPGRPGSTGPPGDEGEPGEPGPPGEKGEAGDEGNAGPDGA PGERGGPGERGPRGTPGARGPRGDPGEAGPQGDQGREGPVGVPGDPGEAGPIGPKGYRGD EGPPGTEGPRGAPGPAGPPGDPGLMGERGEDGPPGNGTEGFPGFPGYPGSRGPPGINGTK GYPGLKGDEGEAGDPGEDNNDIAPRGAKGAKGYRGPEGPQGPPGHVGPPGPDECEILDII MKMCSCCECKCGPIDILFVLDSSESIGLQNFEIAKDFIVKVIDRLSRDELVKFEPGQSHA GVVQYSHNQMQEHVDLRDPNIRNAQDLKEAIKKLQWMGGGTFTGEALQYTRSRLLPPTQN NRIALVITDGRSDTQRDTTPLSVLCGPDIQVVSVGIKDVFGLAAGSDQLNVISCQGLAPQ GRPGISLVKENYAELLDDSFLKNITAQICIDKKCPDYTCPITFSSPADITILLDGSASVG SHNFDITKRFAKRLAERFLTASRTDPGQDVRVAVVQYSGTGQQRPERAALQFLQNYTVLA NTVDSMGFINDATDVMDALGYVTRFYREASSGAAKKRLLLFSDGNSQGATPAAIEKAVQE AQRAGVEIFAVVVGRQVNEPHVRVLVTGKAAEYDVAFGERHLFRVPSYQALLRGVFYQTV SRKVALD NT seq 3084 nt NT seq  +upstreamnt  +downstreamnt atgaggctgccccgcgctctgctccccctgctgctgcaggcctgctgggcctccgcgcag gatgaccccgtggcctcgagggccatcgccttccaagactgccctgtggacctattcttt gtgctggacacctccgagagcgtggccttgaggctgaagccctatggggccctggtggac aaggtcaagtccttcaccaagcgcttcattgacaacctgaatgacaggtactaccgctgt gaccgcaacctggtgtggaatgcgggcgcgctgcactacagcgacgaggtggagatcatc cgcgggctcacgcgcatgcccagcggccgcgacgcgctcaagagcagcgtggacgccgtc aagtacttcggcaagggcacctacaccgactgcgccatcaagaagggtctggaggagctg ctcgtggggggctcccacctgaaggagaataagtacctggtcgtggtgactgacgggcac cccctggaggggtacaaggagccctgtgggggcctggaggacgctgtgaatgaggccaag catctgggcatcaaagtcttctccgtggccatcacgcctgaccacctggagccacgtctg agcatcatcgccacggaccacacgtaccggcgcaacttcacagcggctgactgggggcag agccgcgacgcggaggaagtcatcagccagaccatcgacaccatcacggacatgatcaaa aataatgtggagcaagtgtgctgctccttcgagtgccagcccgccagaggaccccccggg cctcgaggcgaccctgggtacgagggagaaagagggaagcctgggctcccgggagagaaa ggagaagctggagaccctggaagacctggagaccttggacccgtcggctaccagggcatg aagggagaaaaagggagccgaggagagaagggctccaggggacccaaaggctacaagggc gagaagggaaagcgtggcatggacggcgtggatggcatgaagggggagacagggtaccct ggcctgccaggctgcaagggctcgcctggattcgacggtgtccaaggaccccccgggccc aagggcgacgcaggtgccttcggactgaaaggagagaagggtgagcccggagcagacggg gagcctggaagaccagggagcacgggaccccccggagatgagggtgagcccggagagccc ggtcccccaggagagaagggagaagccggcgatgagggaaatgcaggaccagacggagcc cccggagagaggggcggtcctggggaaagaggacctcgagggaccccaggtgcgcggggc ccaagaggagacccgggtgaagctggaccccaaggtgaccagggacgagaaggccccgtt ggtgtccccggtgacccgggcgaggctggccccattgggccaaaaggataccgaggtgat gagggacccccagggaccgagggtcccagaggagctccagggcctgcaggcccccccgga gaccccgggctgatgggtgagaggggtgaagacggcccccccgggaatggcaccgaaggc ttccccggctttcctggctatccaggcagcagaggtcctcctgggataaacggcaccaaa ggctaccctggcctcaagggggacgagggagaagccggggaccccggagaggacaataat gacattgctccacgaggcgccaaaggagcaaagggctaccgaggtcctgaaggcccccag ggacccccaggacacgtgggacctccagggccagacgaatgcgagattttggacatcatc atgaaaatgtgctcttgctgtgagtgcaagtgcgggcccatcgacatcctcttcgtgctg gacagctccgagagcatcggcctacagaacttcgagatcgccaaggacttcatcgtcaag gtcattgaccggctgagcagggacgagctggtcaagtttgagcctgggcagtcacatgcg ggcgtggtgcagtatagccacaaccagatgcaggagcacgtggacctgagggaccccaac atcaggaatgcccaggacctcaaggaggccatcaagaagctgcagtggatgggcgggggc accttcacaggcgaggccctgcagtacactaggagccggctgctgccgcccacccagaac aaccgcatcgccctggtcatcaccgacggccgctcggacacccagagggacaccacccca ctcagcgtgctctgcggccctgacatccaggtggtctccgtgggcatcaaggatgtcttt ggcttggctgcgggctctgaccagctcaacgtcatctcctgccaaggcctggcaccccag ggacggccgggcatctcactggtcaaggaaaactacgccgagctactggacgacagcttc ctgaagaacatcaccgcccagatctgcatagacaagaaatgtccagattacacctgccca atcaccttctcttccccggccgacatcaccatcctcctggacggctccgccagcgtgggc agccacaactttgacatcaccaaacgctttgccaagcggctggcagagcgcttcctgaca gcgagccggacagacccgggccaggacgtgcgcgtggcagtggtgcagtacagtggcaca gggcagcagcggccggagcgcgcggccctgcagttcctgcagaactacactgtgctggcc aacaccgtggactccatgggcttcatcaacgacgccaccgacgtcatggacgccctgggc tacgtgacccgcttctaccgcgaggcctcatctggcgccgccaagaagaggctgctgctc ttctcggatggcaactcgcagggcgccacgccggccgccatcgagaaggcggtgcaggag gcccagcgggcaggcgtggagatcttcgctgtggtggtgggccgccaggtgaacgagccc cacgtgcgtgtcctggtcacgggcaaggcggctgagtatgacgtggccttcggcgagcgc cacctgttccgcgtgcccagctaccaggcgctgctgcggggcgtcttctaccagacggtg tccaggaaggtggcgctggactag

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