Oryx dammah (scimitar-horned oryx): 120881159
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Entry
120881159 CDS
T07255
Symbol
TAF4B
Name
(RefSeq) transcription initiation factor TFIID subunit 4B
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
oda
Oryx dammah (scimitar-horned oryx)
Pathway
oda03022
Basal transcription factors
oda05016
Huntington disease
Brite
KEGG Orthology (KO) [BR:
oda00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
120881159 (TAF4B)
09160 Human Diseases
09164 Neurodegenerative disease
05016 Huntington disease
120881159 (TAF4B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
oda03021
]
120881159 (TAF4B)
03036 Chromosome and associated proteins [BR:
oda03036
]
120881159 (TAF4B)
Transcription machinery [BR:
oda03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
120881159 (TAF4B)
Coactivators
SAGA/TFTC/STAGA complex
120881159 (TAF4B)
Chromosome and associated proteins [BR:
oda03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
120881159 (TAF4B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TAF4
TAFH
Motif
Other DBs
NCBI-GeneID:
120881159
NCBI-ProteinID:
XP_040120704
LinkDB
All DBs
Position
Unknown
AA seq
871 aa
AA seq
DB search
MPAGLTEPAGAAPPAGVGASGTVTMAPAAALPVRVESTPVALGAVTKAPVSVCVESSVSQ
PLRSPVGTLVTKVAPVSALPKLSNGPRLPSPQIVAVKAPNTTTIQLPANLQLPPGTVLIK
SNSGQLMLVSPQQAVTRTETTSNITSRPAVPANTQTVKICTMPNSSSQLIKKVAVAPVKQ
LAQGGTSVVASVPKPSPVQSVAVPTNVVTVTPVKPMNTVTTLKPSSVGTASAPSNELNLK
TENSASAQANLSPTMLENVKKCKNFLAMLIKLACSGSQSPEMGQNVKKLVEQLLDAKIEA
EEFTRQLYVELKSSPQPHLVPFLKKSVIALRQLMPNAQSFIQQCVQQTSSEVVTTTCTAT
STPSPVVTMAASSIQAEKPVGGGSEAAVPGVVSVQTLKPLAGPGGAKTGVVTLHSVGPAA
VPGGTTAGAVVLQTPKPLVTSLQNTVTALQNTVTAVSLQPEKPVVSGTAVTLALPSVPFG
KTSAAAVCIPSVKPILTSAGTTSDKPTLGPPLQIKLAQPGPVLAQPAGIPQAVKVKQLVV
QQPSGGLAKQVTTLTHSPALTIQKSGQKKVTVSTTIPTSQFSQASILKQITLPGNKILSL
QSSVQKNKIKENGTISFRDEDDINDVTSMAGVNLSEENACILATNSELVGTLVQSCKDEP
FLFIGALQKRILDIGKKHDITELNSDAVNLISHATQERLRGLLEKLTTIAQHRMTTYKAS
ENYILSNDTRSQLKFLEKLDQLEKQRKDLEEREMLLKAAKSRSNKEDPEQLRLKQKAKEL
QQLELAQIQQRDANLTALAAIGPRKKRPLESGSGSEGLKDNLFASGTSSLAASKQLVRPR
ITRICLRDLIFCMEQERDMKYSRALYLALLK
NT seq
2616 nt
NT seq
+upstream
nt +downstream
nt
atgcccgcgggcctcacggagccggccggcgccgctccccccgccggtgtgggcgcctcc
gggaccgtgaccatggcccccgccgcggctctgcccgtccgggtggagagcactccggtg
gccctgggcgccgtgactaaggctcctgtcagtgtctgcgtagagtcctcggtgtcccag
ccgctgcggtcccccgtggggaccctggtgaccaaagtggcccctgtcagtgcccttcct
aaactcagcaacggccctcgtctaccatctcctcagatcgtcgccgtgaaagcccccaac
accaccacaatccaattgcctgctaatctgcagcttcctccaggaaccgttttgatcaaa
agtaacagtggtcagctgatgttggtatctcctcagcaagctgtaacaagaactgagacc
acaagtaacataacttcaaggccagctgtaccagcaaatacgcaaaccgtcaaaatctgt
accatgccgaattctagttcacagttaatcaagaaagtggcagtggcacctgttaaacag
ttggcacaaggaggaacttctgtggtggcctctgttccaaagccttccccagtgcaatct
gtggctgtgccaaccaacgtggtcacagttactcctgtaaagcccatgaatactgtaaca
accctgaagccttcaagtgtgggaacagcatctgccccttcaaatgagctcaatctcaaa
acagagaactcggcctctgctcaggctaacctttctccgacgatgctagaaaatgtgaag
aaatgtaagaacttcctcgcaatgttaataaaactagcgtgtagtggatcccagtccccg
gagatggggcagaatgtgaagaagttggtagagcaacttttggatgcaaaaattgaagca
gaagagtttactagacaactgtatgttgaactcaagtcttcacctcagcctcacctagtt
cctttccttaagaaaagtgtgattgccttacgacaactgatgcccaacgcccagagcttt
attcagcagtgcgttcagcagacttctagcgaggtggtcactactacctgtaccgcaaca
tcaacgccttctcccgtggtaacaatggcagcttcctccatccaggctgagaaacctgtt
ggtggtggttcggaagcagcggtgcctggagttgtgtccgtacaaactctgaaaccactt
gctggtccagggggagcaaaaactggagtcgtgactcttcactctgtgggtccggctgct
gtgcctggagggacaacagctggagctgtcgtgctgcagactccaaaacctctggtgaca
tccctgcagaacacggtgacagccctgcagaacacggtgacagcagtctctctgcagcct
gaaaagccggttgtctccgggacagcagtgacgctggcgctcccctcggtaccttttgga
aaaacctcagcagcagctgtttgcattccgtctgtgaaacccattcttacttccgctggg
accacgtccgacaagcccacccttggccctccactccaaatcaaactcgcgcagccgggc
cccgtgcttgcacagccagccggtatcccacaggcagttaaagtcaaacaactagtagtc
cagcagccttcaggaggccttgcaaaacaagtgaccactcttactcattccccagcattg
accatccagaaatctggacagaagaaggtgacagtgagcactacaatacctaccagtcag
ttttctcaagcttccattctaaaacaaattacccttccaggaaataaaattctgtcactt
caatcatctgttcagaaaaacaaaataaaagagaatggaacaatatccttcagagatgaa
gatgacatcaatgatgtgacttccatggcaggggtcaacctcagtgaagaaaacgcctgc
atcttagcaacaaactctgaattggttggcacactcgttcagtcctgtaaagatgaaccg
ttccttttcattggagctctacaaaagcgaattttagacattggtaaaaagcatgacatt
acggaacttaattctgatgctgtgaacttgatctcccatgcaacacaggagcgattacga
ggccttctagaaaaactgactacaattgctcagcatcgaatgacaacttacaaggcaagt
gaaaattacatcctgtctaatgacaccagatcacagctcaaatttcttgaaaagctagat
caactggagaagcagagaaaggatttagaagaaagagaaatgttacttaaagcagccaag
agtcgttccaataaagaagatccagaacagctgagattaaagcagaaagccaaagagtta
caacagttggagctcgcacagatacagcagagagatgctaatctcacagctcttgcagct
attggaccaaggaagaagagaccactagagtccgggtctggaagtgagggtttaaaagac
aacctgtttgcttctgggacgtccagtctggcagccagcaagcagctggttcgtccaaga
atcacaagaatctgcctcagggacctgatcttctgtatggagcaggagagggatatgaag
tattcccgagctctgtacctggccctcctgaagtga
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