Oryx dammah (scimitar-horned oryx): 120881377
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Entry
120881377 CDS
T07255
Symbol
COL4A6
Name
(RefSeq) collagen alpha-6(IV) chain isoform X1
KO
K06237
collagen type IV alpha
Organism
oda
Oryx dammah (scimitar-horned oryx)
Pathway
oda04151
PI3K-Akt signaling pathway
oda04510
Focal adhesion
oda04512
ECM-receptor interaction
oda04820
Cytoskeleton in muscle cells
oda04926
Relaxin signaling pathway
oda04933
AGE-RAGE signaling pathway in diabetic complications
oda04974
Protein digestion and absorption
oda05146
Amoebiasis
oda05165
Human papillomavirus infection
oda05200
Pathways in cancer
oda05222
Small cell lung cancer
Brite
KEGG Orthology (KO) [BR:
oda00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
120881377 (COL4A6)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
120881377 (COL4A6)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
120881377 (COL4A6)
09142 Cell motility
04820 Cytoskeleton in muscle cells
120881377 (COL4A6)
09150 Organismal Systems
09152 Endocrine system
04926 Relaxin signaling pathway
120881377 (COL4A6)
09154 Digestive system
04974 Protein digestion and absorption
120881377 (COL4A6)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
120881377 (COL4A6)
09162 Cancer: specific types
05222 Small cell lung cancer
120881377 (COL4A6)
09172 Infectious disease: viral
05165 Human papillomavirus infection
120881377 (COL4A6)
09174 Infectious disease: parasitic
05146 Amoebiasis
120881377 (COL4A6)
09167 Endocrine and metabolic disease
04933 AGE-RAGE signaling pathway in diabetic complications
120881377 (COL4A6)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
oda04147
]
120881377 (COL4A6)
00536 Glycosaminoglycan binding proteins [BR:
oda00536
]
120881377 (COL4A6)
Exosome [BR:
oda04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
120881377 (COL4A6)
Glycosaminoglycan binding proteins [BR:
oda00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
120881377 (COL4A6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
120881377
NCBI-ProteinID:
XP_040120985
LinkDB
All DBs
Position
Unknown
AA seq
1706 aa
AA seq
DB search
MHPGLWLLLVTLCLTEELAGAGEKKPYGKPCGGQDCSGACKCSPEKGARGRPGPIGIQGP
TGPQGLPGPSGLSGLKGDRGSPGPLGPHGPKGDKGPMGVPGFLGINGIPGHPGQPGPRGP
PGLDGCNGTQGAVGFPGPDGYSGLPGPPGLPGQKGSKGEPALAQGSFKGMKGEPGLPGLD
GIAGPQGTPGSPGDVGPIGPPGLQGPPGPPGFPGPDGNMGLGFQGEKGVKGDVGLPGPAG
PPPSTGELEFMGFPKGKKGSKGEPGPQGFPGISGPPGLPGFGIAGEKGEKGIPGLPGPRG
PMGLEGVQGPPGSQGRKGSSGFPGLNGFPGIKGEKGGIGLPGPDIFIDTDGAVISGYPGD
PGIPGLPGLKGDEGIQGLPGPPGAPGLPALPGGPGALGTQGALGLKGQRGNPGRTTTGAA
GLPGRDGLPGLPGLPGPPGEASETGTLQSTEPGSPGLRGERGPKGHPGLKGIKGDPGFCA
CDGGVPNMGPPGKPGLPGPPGLLGLPGLKGTKGDPGSGGAQGPSGDPGVFGLRGPTGPKG
KKGDPTLSTGSGMPGDQGDPGPQGLPGETGAPGKDGTPGLPGLPGLLGDGAQGFPGEKGL
PGLPGEKGHTGPTGPPGIGLPGAPGPRGLSGDKGVDGLPGQPGPRGVPGDCCCKEEVGKK
DLDTEGGITLPCIIPGPYGPAGLPGAPGFPGPKGARGLPGAPGQPGLRGNKGDPGSPGLV
HLPELPGFPGPHGEKGLPGFPGLPGKDGLPGKVGSPGSPGPKGAPGDILGAENGAPGEQG
LQGLPGDRGFPGDSGLPGLKGLLGKSGLLGPKGERGSPGIPGRVGQPGPPGPSGLFGIKG
KPGLRGPPGFPGISGHPGKKGPRGEIGLPASAGKRGLPGLKGLPGPPGPIGFLGNSGLPG
ATGLPGLPGPKGEKGSVGLTGFPGIPGLPGIPGASGLKGIPGSTGRVGPSGWAGSPGEKG
DRGDPGPFGIPSHRPPTLNLRFKGDKGSQGSSGAVGFPGPRGDKGEAGHPGPPGLPGASG
FPSLIKGLSGRPGPPGSTGLRGLPGLKGHPGITGFPGIQGESGSQGLSGAPGLPGASGLP
GFKGDQGQTLGISGSPGPKGQPGEPGFKGVKGKDGQVGDVGFPGNKGEDGKVGISGDVGL
PGSLGLPGVAGMRGNPGLPGSPGHPGATGPLGPPGLIGTKGFPGLPGLHGLNGLPGTKGT
RGTPGPSITGVPGPAGLPGPKGEKGSPGIGIGAPGKPGIRGPKGSQGFPGLQGTAGLPGA
LGLSLPSVIEGQPGDPGRPGLDGERGRPGPPGPPGPPGPSSDQGDPGDPGFPGIPGPQGP
KGDQGIPGFSGLPGELGLKGMRGEPGFMGTPGKVGPPGDPGLPGMKGKAGPRGLSGPRGA
PGHTPIAEAIQAPPGPMGLPGIDGIPGLMGDPGVQGPVGLQGSKGLPGIPGKDGTNGLPG
PPGALGDPGLPGLQGPPGFEGAPGKPGPFGRAGVPGQSLRVGYTLVKHSQSEQVPLCPSG
MSQLWMGYSLLFVEGQEKAHNQDLGFAGSCLPRFSTMPFIYCNMNEVCHYARRNDKSYWL
STTAPIPMMPVGQTRIPQYISRCSVCEAPSQAIAVHSQDITIPQCPLGWRSLWIGYSFLM
HTAAGAEGGGQSLVSPGSCLEDFRATPFIECSGARGTCHYFANKYSFWLTTVEERQQFGE
EPVSETLKAAQLHTRVSRCQVCMKSV
NT seq
5121 nt
NT seq
+upstream
nt +downstream
nt
atgcaccctgggttgtggctgcttctggttactttgtgcctgaccgaggaactggcagga
gcgggagagaagaagccctatgggaagccatgtgggggccaagactgcagtggggcctgt
aagtgctctcctgagaaaggagccagagggagaccaggaccaattggaattcaaggtcca
acaggtcctcaaggacttcctggccctagtggtttatcagggttgaaaggggacagggga
tccccaggcccgctgggaccgcatggaccaaaaggcgataagggtcccatgggtgttccc
ggctttcttggcatcaatggaattccgggccaccctggacagccaggacccagaggccca
cctggcctggatggctgtaatggaactcaaggagctgttggatttccaggccctgatggc
tattctgggcttcctggaccacctgggcttcctggtcagaaaggctctaaaggtgaacct
gcccttgcccaaggtagtttcaaaggcatgaagggggagcctgggctgcccggactggat
ggaatcgctggcccacaaggaacacccggatccccaggagatgtaggacccataggacca
ccaggattgcaaggtcctcctggcccccctggtttccctggtcctgatgggaatatgggg
ttaggtttccaaggagagaaaggagtcaagggagatgttggcctgcctggtcctgcagga
cccccaccatctactggagaactggaattcatgggatttcccaaagggaagaaaggatcc
aagggtgaaccagggcctcagggcttcccaggaataagtggtccacctggtctgccggga
tttggaattgctggagaaaaaggagaaaagggaattcctggtttgccaggaccgaggggt
cccatgggtttagaaggagtccaaggccctccggggagtcagggcagaaaggggtcttca
ggtttccccgggcttaatggattcccaggaattaagggtgaaaaaggtggcattggcctg
ccaggcccagatattttcatcgatacagatggtgctgtgatctcaggttatcctggagac
cctggtataccaggcctcccaggccttaaaggagatgaaggcatacagggcctacctggc
cctcctggtgcccctggattaccggctttaccaggtggccctggtgctctgggcacccag
ggagctctaggcctgaaggggcagcgaggaaaccctggccggaccacaacaggcgcagct
ggtctccctggcagagatggtttgccaggcctgccaggcctaccaggcccacctggtgaa
gcatctgagacgggaaccctacagagcacagaaccgggatcgccgggactccgaggggaa
cgaggtccaaaaggacacccaggcctcaaaggaattaaaggggacccaggtttttgtgct
tgtgatggtggtgtccccaacatggggccacctgggaagccaggcctgcctgggccacca
ggacttctgggccttccaggtcttaaaggaaccaaaggtgatccaggctctgggggtgca
cagggcccatcaggggatccaggtgtatttgggcttcgaggtccaacaggccctaaagga
aagaaaggggacccgactctcagcacaggatcagggatgccaggagatcaaggtgatcct
ggcccccaggggctccctggtgagacaggagccccaggcaaggatggaacaccaggttta
ccagggctgccaggccttctgggtgatggtgcacagggcttccccggtgaaaaggggtta
ccaggacttcctggtgaaaaaggccacactggtccaactggccccccaggaattgggcta
ccaggggctcctggacctcgtggactttctggagataaaggagtagatggattaccaggg
caaccaggcccccgtggagttccaggtgactgctgctgcaaggaggaggttgggaaaaaa
gacttagacacagagggaggtatcaccttgccttgtattattcctggaccatatggtcca
gcaggactcccaggagctcccggattcccaggccctaaaggggcccgtggcctccctggg
gctccaggccaacctggattgcgtggaaataaaggagaccccggaagtccaggattggtt
cacctgcctgaattgccagggtttcctggacctcatggggagaagggcttgcctgggttt
cctgggctccctggaaaagatggcttgcctgggaaagttggcagccccggctcaccaggt
ccaaagggagcccctggtgacatccttggtgctgaaaatggtgctccgggggagcaaggc
ctacagggactgcctggggacagaggatttcctggagactctggccttccaggactcaag
ggtttgcttgggaagtcgggcttgctcggccccaaaggtgagcggggcagccctggaata
ccaggccgcgtgggtcagccaggccccccaggccctagtggtctgtttggcatcaagggc
aaacccgggctccgcggacccccaggctttccaggcatttcaggacatcctggaaagaaa
ggtccaagaggcgagataggtctccctgcgtcagctggaaagagaggcctgcctgggctg
aaagggcttccgggaccgccagggccaattggcttcctggggaactcaggcttgccaggg
gctactgggttgccagggctgccaggtccgaagggtgagaaggggtctgttggactgaca
ggttttccagggattccaggtctccctggtattcctggagcaagtggattaaagggaatt
cctgggtcgacaggaagagtggggccatctggatgggctggtagccctggtgaaaaagga
gacagaggtgacccaggcccctttgggatacccagtcatcgacctccaacgctaaacctc
cgcttcaaaggagacaaaggttctcagggctcatctggagccgttggatttcccggaccc
agaggtgacaaaggagaggctggccaccccgggccaccaggcttgcctggagcttctggc
ttccccagcctcatcaagggacttagtgggagaccaggcccccctggctccacaggacta
cggggcttacctggcctgaagggacaccctggaatcacaggtttcccaggaattcaagga
gaaagtggttcacagggtctcagtggagctcccgggctaccaggagcatctggtctccca
ggtttcaaaggagatcaaggccagacacttggaatttctggtagcccaggacccaaggga
caacctggggagcctggcttcaaaggtgtgaaaggaaaagacggacaagttggtgatgtg
ggtttcccaggaaacaaaggtgaagatgggaaagttggtatttctggagatgttggcctt
cctggctccctaggactccccggagttgcaggcatgagaggaaatccagggcttccaggt
tctccaggccacccaggggcaactgggcccctgggtccccctggcctaataggaaccaaa
ggtttccctggacttccaggtttgcatggactgaatgggcttccaggaaccaaggggacc
cgtggaactccaggacctagtataaccggtgtgcctgggccagctggcttgcctggtccc
aaaggggaaaaaggttctccaggaattggcatcggagccccaggaaagccaggtataaga
ggacccaaaggtagtcaaggttttccaggtctccagggcactgctggtctccctggtgca
ctgggcctctccttgccttcagtcatagaaggacagcccggcgaccctgggcgaccaggc
ctagatggagaacgaggccgcccaggcccccctgggcccccaggccctcctgggccctcc
tcagaccaaggcgaccctggagaccctggcttccctggaattcctggccctcaagggccc
aaaggagaccaaggaattccaggtttctccggcctccctggagagctaggattgaaaggc
atgagaggtgagcctggcttcatggggactccaggcaaggttggaccacctggagaccca
ggacttcccgggatgaaggggaaggcggggccaagaggcttatccggccctcgaggtgct
cctggacacacacccattgcagaagccatccaggctccccctggacccatgggccttcca
ggcattgatggcatccctggcctcatgggagaccccggggtccaaggacctgtgggccta
caaggatctaaaggtttacctggcatccccggcaaagatggcaccaatggactccctggc
ccacctggggctcttggtgatcctggtctccctggactacaaggccctccaggatttgaa
ggagctccagggaagccgggccccttcgggagggctggagtgcctgggcagagcctaaga
gtgggctacaccttggtgaagcacagccagtcagaacaggtgcccttgtgccccagcggg
atgagccagctctggatgggttacagcctgctgtttgtggaggggcaagagaaagcccac
aaccaggacctggggtttgctggctcctgcctgccccgcttcagcaccatgccattcatc
tactgcaatatgaatgaagtgtgtcactatgcccgacggaacgacaagtcctactggctc
tccaccaccgcacctatccctatgatgcctgtcggccagacacggatccctcagtacatc
agccgctgctctgtgtgtgaggcgccctcgcaagccatcgccgtgcacagccaggacatc
accatcccacagtgccccctgggctggcgcagtctgtggattgggtactccttcctcatg
cacacagccgccggtgcagagggcgggggccagtccctggtctctcctggatcctgccta
gaggatttccgggctactcctttcatcgagtgcagtggtgcccggggcacctgccactac
tttgccaacaaatatagtttctggctgacaacagtggaagagaggcagcagtttggggag
gagcctgtatctgagacgctgaaagccgcacagctccacacccgggtcagccgctgccag
gtgtgtatgaaaagtgtatag
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integrated database retrieval system
