Oryx dammah (scimitar-horned oryx): 120882187
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Entry
120882187 CDS
T07255
Symbol
APEX2
Name
(RefSeq) DNA-(apurinic or apyrimidinic site) endonuclease 2 isoform X1
KO
K10772
AP endonuclease 2 [EC:
3.1.11.2
]
Organism
oda
Oryx dammah (scimitar-horned oryx)
Brite
KEGG Orthology (KO) [BR:
oda00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
oda03400
]
120882187 (APEX2)
Enzymes [BR:
oda01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
120882187 (APEX2)
DNA repair and recombination proteins [BR:
oda03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
120882187 (APEX2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Zn_ribbon_GRF
Exo_endo_phos_2
Casein
Motif
Other DBs
NCBI-GeneID:
120882187
NCBI-ProteinID:
XP_040122003
LinkDB
All DBs
Position
Unknown
AA seq
514 aa
AA seq
DB search
MLRLVSWNINGIRSPLQGGKYEEPSSCSAMAMGRILDKLDADIVCLQETKVTRDVLTEPL
AIIEGYNSYFSFSRNRSGYSGVATFCKDSATPVAAEEGLSGLLSTQNGDVGCYGNMDDFT
QEELRALDSEGRALLTQHKICTWEGKEKTLTLINVYCPHADPGKPERLTFKMRFYRLLQI
RAEALLAAGSHVIILGDLNTAHRPIDHWDAVNMECFEEDPGRKWMDGLLSNLGCESDSHM
GPFIDSYRCFHPKQKGAFTCWSTVSGARHLNYGSRLDYVLGDRTLVIDTFQASFLLPEVM
GSDHCPVGAVLSVSSVPAKQCPPLCTCFLPEFAGTQLKILRFLVHLKQDPVFKQSALQPS
NQTQVHMHQNKARVRSTRSRSSKTVSSRGQKNLMSYFQPSSSRPQTSNLDLPSLGTLMTP
KTSEEDLMANVVEGQAKASEAKDEKERRTSFWKSLLGGPSPMPLCGGHREPCVMRTVKKP
GPNLGRHFYMCARPQGPPTDPSSRCNFFLWSRPS
NT seq
1545 nt
NT seq
+upstream
nt +downstream
nt
atgttgcgcttggtgagctggaacatcaatgggatccggagccccttgcaaggggggaaa
tacgaggagcccagcagctgcagcgccatggccatggggcgcattttggacaagctggat
gcagacatcgtctgtcttcaggagaccaaagtaaccagggatgtgctgacagagcccttg
gctatcattgagggctacaactcctatttcagcttcagccgcaaccgcagtggctattcg
ggtgtagccactttctgtaaggacagtgctaccccagtggctgctgaagaaggcctgagt
ggcctgctttccactcagaatggggatgtgggttgctatggaaacatggatgacttcacc
caagaggagcttcgagctctggatagtgagggccgggccctcctcacacaacacaaaatc
tgtacatgggaagggaaggagaagaccttgaccctaatcaacgtttactgcccccatgcg
gaccctgggaagcctgagcgactcacctttaagatgcgcttctatcgcttgctgcagatc
cgagcagaagctctcctggcagctggcagccatgttatcattctgggtgatctgaataca
gcccaccgccccattgatcactgggatgcagtcaacatggaatgctttgaagaggaccca
gggcgcaagtggatggatggtttgctcagtaacctggggtgcgagagtgactcccacatg
ggacccttcatcgatagctaccgctgcttccacccaaagcagaagggggccttcacctgt
tggtcaacagtcagtggtgcccgccatttgaactatggctcccggcttgactacgtgttg
ggggataggaccctggtcatagacacctttcaggcctccttcttgctgcctgaggtgatg
ggctctgatcactgccctgtgggtgcagtcttaagcgtgtcctctgtgccagcaaaacag
tgcccacctctgtgcacctgcttcctccccgagtttgcaggtacccaactcaagatccta
cgattcctggttcacctcaaacaagatcctgtgttcaagcaatcagcactacagcccagc
aatcaaacacaggtacacatgcaccaaaacaaagcccgtgtgcgctcaactaggtcccgg
tcaagtaaaactgtctccagtagaggccaaaaaaacctgatgagctacttccagccatcc
tccagtcgcccccaaacttctaacttggatcttcctagcctgggcacccttatgacccca
aagacctcagaagaggacttgatggccaatgtggtggaggggcaggccaaggcttcagag
gccaaggatgaaaaggagagacggacctcattctggaagtctctgctgggaggaccctca
cccatgcccctctgtgggggacacagggagccatgtgtaatgcgaactgtaaagaagcca
ggacccaacctgggccgccacttctacatgtgtgccaggccccagggtcctcccactgac
ccctcttcccgctgcaatttcttcctctggagcaggcccagctga
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