KEGG   Oryx dammah (scimitar-horned oryx): 120882511
Entry
120882511         CDS       T07255                                 
Symbol
NXF5
Name
(RefSeq) nuclear RNA export factor 5
  KO
K14284  nuclear RNA export factor
Organism
oda  Oryx dammah (scimitar-horned oryx)
Pathway
oda03008  Ribosome biogenesis in eukaryotes
oda03013  Nucleocytoplasmic transport
oda03015  mRNA surveillance pathway
oda05014  Amyotrophic lateral sclerosis
oda05164  Influenza A
oda05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:oda00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    120882511 (NXF5)
   03015 mRNA surveillance pathway
    120882511 (NXF5)
   03008 Ribosome biogenesis in eukaryotes
    120882511 (NXF5)
 09160 Human Diseases
  09172 Infectious disease: viral
   05164 Influenza A
    120882511 (NXF5)
   05168 Herpes simplex virus 1 infection
    120882511 (NXF5)
  09164 Neurodegenerative disease
   05014 Amyotrophic lateral sclerosis
    120882511 (NXF5)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:oda03019]
    120882511 (NXF5)
   03009 Ribosome biogenesis [BR:oda03009]
    120882511 (NXF5)
Messenger RNA biogenesis [BR:oda03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     120882511 (NXF5)
   mRNA cycle factors
    Stress granule specific factors
     120882511 (NXF5)
Ribosome biogenesis [BR:oda03009]
 Eukaryotic type
  Pre-60S particles
   Export and cytoplasmic maturation factors
    120882511 (NXF5)
SSDB
Motif
Pfam: LRR_NXF1-5 NXF_NTF2 Tap-RNA_bind TAP_C NTF2 Luteo_coat LRR_4 LRR_8 LRR_Zer-1 Zn_ribbon_HMPTM UBA_8
Other DBs
NCBI-GeneID: 120882511
NCBI-ProteinID: XP_040122448
LinkDB
Position
Unknown
AA seq 560 aa
MRNVHEGPKERPSPYSFRGNRTVRWHKKGNIHVTVWGNGKPVMRKMRENTQDDAQGSWFK
VTIPRGMKYDRIWLMNSIQSLCSVCFTPVDFHYVKNGARFFVQKASTASALMDVSYKIYD
ENNQKIPIFVNPSAVPYSVRNKLGPEKMEKLKLAFNKRFDVSQQSLDLQKLRFDPNLVGH
DIEIILNRRNCMAAALQIIKKNFPELLSLNLSCNKLYHLDGLSDIVHMVPTVKILDLSKN
KLNSMWELNKMKGLKLEELWLQGNPLCDSFPDQSTYLSAIIECFPKLLRLDGQELPSPVV
IDSHTPCATKPSKENCKESDTLKNTILQFLKQYYLIYDSGNRSGLLNAYHQKACFSLTIP
FHSEDPAVSSLCAYFKNSRNMKKVKDPNLRVQQLKHTNSAIVRALCVLPQTQHDLSSFLV
DMWFQTGTLLCFSVNGVFKEVEGGSQDCVRAFTRTFIITPASSSSLCIVNDELFVMEASP
KNTQSAFSIPVPTPSTSSVATLSEEQQQMVQAFSTQSGMNYQWSQKCLQDNEWNYTRAGQ
IFCMFKTEGKIPEEAFKQIP
NT seq 1683 nt   +upstreamnt  +downstreamnt
atgaggaatgtccatgagggccctaaagaaagaccctctccctattccttccgaggcaac
aggacagtgagatggcacaaaaaaggcaatatccatgttactgtgtggggaaatggaaaa
cctgtgatgagaaaaatgagggagaacacgcaagatgatgcccaaggaagctggtttaag
gtcacaattcctcgtgggatgaagtatgacaggatatggctgatgaactcaatccagagc
ctttgcagtgtctgctttactccagtggatttccactatgtgaaaaatggggctcgattc
tttgtccagaaagctagcactgcctctgccttgatggatgtcagctacaagatctatgat
gagaataaccaaaagatacctatctttgtcaacccctctgctgttccctactctgtgcgt
aataagttgggaccagaaaaaatggagaagctaaagctggcctttaacaaacgatttgat
gtttcccagcaatctcttgacctccagaagctccgctttgacccaaacttggtgggccat
gatattgagataattctgaatcgaagaaactgcatggctgctgccctgcagatcatcaag
aagaacttccctgagctgttgtccttgaacctgagctgcaataaactgtaccacctggac
ggcctgtctgacattgtgcacatggtccccacagtcaagatcctggacctctccaaaaat
aagctgaactctatgtgggagttgaacaagatgaagggactgaagcttgaagagctgtgg
ctgcaagggaacccactgtgtgacagctttccagaccagtccacctacttaagtgccatc
atagaatgtttcccaaagttactgcgcctggatggccaggagttaccttcaccagttgtc
attgacagtcacactccctgtgcaacaaagcccagcaaggaaaactgtaaagaatctgac
acactgaagaatacgatccttcaattcctgaagcaatactacttgatctatgactctgga
aaccgatctggtctcctcaatgcttaccaccagaaggcctgcttctccctgaccattcca
ttccactctgaggatccagccgtgagcagcttatgtgcatacttcaagaacagcaggaat
atgaagaaggtcaaggaccccaacctgcgtgtccagcagttgaagcacacaaatagtgcc
attgtgcgtgccctctgtgtgttgccccaaactcagcatgacctcagctccttcctggtg
gacatgtggttccagacaggtacgctgctctgcttctctgtcaatggggtgttcaaggaa
gtggaaggagggtctcaggactgtgtgcgtgccttcacccggaccttcatcattacccct
gccagctcttcaagtctttgtatagtgaatgatgagctgtttgtgatggaagccagccct
aaaaacacccagagtgcattctccatcccggtgcccacaccgtccaccagctcagtggcc
actttgtccgaggagcagcagcaaatggtacaagccttctccactcagtctgggatgaac
tatcagtggtctcagaagtgccttcaggacaatgaatggaactacaccagagctggtcaa
atcttctgtatgttcaagactgagggcaagatcccagaggaagccttcaaacaaatcccc
taa

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