Oryx dammah (scimitar-horned oryx): 120882546
Help
Entry
120882546 CDS
T07255
Name
(RefSeq) ATP-binding cassette sub-family A member 3-like
KO
K05643
ATP-binding cassette, subfamily A (ABC1), member 3
Organism
oda
Oryx dammah (scimitar-horned oryx)
Pathway
oda02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
oda00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
120882546
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
oda02000
]
120882546
Transporters [BR:
oda02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
120882546
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
AAA_23
AAA_15
SRP54
AAA_30
RsgA_GTPase
CRA
Motif
Other DBs
NCBI-GeneID:
120882546
NCBI-ProteinID:
XP_040122495
LinkDB
All DBs
Position
Unknown
AA seq
1669 aa
AA seq
DB search
MDTLWLHQFAVLLWKNFILKKRKMASLIVEISMTVLFCTLILLLRKHSTRELTQATFFQS
FPLNELPTFLTNKEKEFELVYVPSGSDVAKNITEKVKNDLNANLAVRGFPSEEDFEKYIK
YKNQSALVLAAIIFDHDFKNSNDRLPLKVKYRLRYLSDKNTPWFTELLFPVNPSVGPRNP
TSAEGGNPEYYKDGFLLVQHALDKAIIVYHNGRAAEMLFENVIIFVGRFPYPAYYKDQFF
LTFLSLFPLAVLLIFSLTELTLIRTIVMEKETRLKEYQFMIGLSNGMLWASYFVTFLLMF
LIIVCILCVILCVKVVPIVILRNSDPSLIFVFFLCFVVATITLGFLITTFFSKTTFAVSV
GGFLFFLSFFPFVVVITMYGMLSHTGKLASCLLSNVAVALGINSISNLEMKEYGAKWNNF
LSRVSPDDELTLAQIMGMLLFDAFLYGLLAWYIDAVFPGKYGVPKPWYFFMQKGYWLGKA
TSIRKKEDMPVTSRVQNAYFEEEPVGLMAGIRIQHLYKEFTLQNMTVLAVQDLSLNLYEG
QITVLLGHNGAGKTTTLSVLTGLYRPTSGKVYISGYDISKDMVQVRKSLGLCPQDDILFH
QLTVSEHLYFYCVIKGVPPKTRSKEINKMLLSFDLIEKRDALSKSLSGGMKRKLSIIIAL
IGDSKVVILDEPTSGMDPVSRRFTWDVLQKHKENRTILLTTHHMDEADVLGDRIAIMVKG
TLQCCGSTIFLKKVYGVGYHLIIVKDPHCDVKEISKLIKYHVPEAKLENNVAAELSFILP
KEYANRFKDLFTEMENRQEELGIASFGISITTMEEVFIRVSQSNNPILQTLKSEDESEDT
NQNMNVPRNFERSYFSSNLNEHSNITFNTGWTLYSQQFFAMFMKRAMFSWRNWNLILLQI
LALLGIFYFLMSDVEFSRGEELEREMDLEQYGETIVPFSISGNSEFTTNFVKNLEILLKA
KKQKLHEVKGDLKAYLVGNQKCIYSCIIAFSIEVNGNESIVNFLFNNEAYHSSSLSLAVL
DNVIFMSLSGPDASITVINKPQPARSAFDGPEYSVMTGTQVALNLYFGVSILVSGFCLLT
VSERVTKAKHIQFLSGVYALNFWLSALLWDFLIFFISCCLLLVVFMFSDLKILVTDYRLL
DTLLIFIVFGWSVIPFMYLISFLFSSHTSAYTKLVIFNYCAGIVGAVADLFITSIQGKEA
ASRSILLNAMMVLPIHNFGMSISRHYDIQHTKLACASQGKVSPIMDCSKAVTERSIYTLE
RDAVGRYLIAMAVTGLLFLLLIFLLETTLWKLKTFVFRYILFGIFKKYNKDRVSKELSGE
SEDEDVQNERNRILEHPQKSLNSVVLIKELTKVYFATPVVLAVRNISVAIQKQECFGLLG
LNGAGKTTTFQILTGEEVASSGDVFVKHLSITKNILKVRSKIGYCPQFDALLDYMTAREI
MIMYARLWGIPETKINNYVKKSIQALNLEPYADKYIYTYSGGNKRRLSTAIALMGKPSVI
FLDEPSTGMDPVARRLLWNAVTRTRESGKAIIITSHSMEECDALCTKLAIMVKGKFMCLG
SPQHLKNKFGNVYILKVKINIDENENQLEHFKTFIETAFPGSELKHENRGIINYYVPSKN
NSWGKMFGILEEAKEEFNLEDYSISQITLEQVFLTFAGSQNPEVEKKES
NT seq
5010 nt
NT seq
+upstream
nt +downstream
nt
atggataccttgtggcttcaccagtttgccgtcctcctctggaaaaatttcatattaaag
aaacggaagatggcttctttaattgtggaaatttccatgacagtgctgttctgtacattg
attttgcttctgcgcaaacattccacaagggaacttacacaagctacttttttccagtct
tttcccttgaatgaacttcccactttcctcactaataaggaaaaggaatttgaattggtt
tacgtgccttctggaagtgatgtggcaaaaaatattactgagaaagtgaaaaacgattta
aatgccaaccttgcagttcgtggctttccttcagaagaagattttgaaaagtatattaaa
tacaaaaatcagtctgctcttgtgctggctgctatcatatttgatcatgacttcaaaaac
agtaatgacagattgccacttaaggtaaaatatcgtctgcgttacctttctgataaaaat
actccgtggtttacagaacttctctttccagtaaatccgtctgtaggacccaggaaccct
acctctgcagaagggggaaatcctgagtactacaaagacggattcctgcttgtgcagcat
gccttagataaggccatcattgtgtaccataatggcagagctgcggaaatgctatttgaa
aatgtcatcatttttgttggcagatttccataccctgcttattataaagatcaatttttt
ttaacttttttatctctcttccctttagcagttttacttatattttctctaactgaactt
actcttatcaggaccattgttatggaaaaggaaaccagattaaaggagtaccagttcatg
atagggctcagtaatggtatgctctgggcatcttattttgtcacattccttctgatgttt
ttaattatcgtctgtatactgtgcgtgattttatgtgtcaaggttgtacctatagttatc
ctcagaaacagtgacccgtccctcatctttgtctttttcctgtgttttgtcgtggccacc
ataaccctcggctttctgattaccacattcttcagtaaaactacatttgctgtttctgtt
ggaggtttcctctttttcctttccttctttccatttgtagtagtcatcaccatgtatgga
atgttgagccacacggggaagctggcttcctgtctcctttcaaatgttgcagtagctttg
gggattaattctataagcaatttggaaatgaaggaatatggtgctaagtggaataacttc
ttgtcacgagtgagcccagatgatgaactcactcttgctcagattatgggaatgctttta
tttgatgccttcttatatggccttctggcctggtatatagatgctgtctttccaggaaag
tatggtgtgcccaagccatggtatttctttatgcagaaaggctactggcttggaaaggct
acaagcattaggaaaaaggaagatatgcctgttactagtagagttcaaaatgcttacttt
gaagaagaacctgttggtttgatggctggtatcaggattcaacatttgtacaaggaattc
acattgcaaaatatgacagtactagcagttcaagacttatctttgaatttatatgagggg
caaatcactgtccttctcggtcataatggagcagggaagactactaccttatctgtcctc
acaggtctctatcgtcctaccagtggaaaggtgtatattagtggatatgatatctcaaaa
gatatggttcaagtcaggaaaagcttgggcttgtgcccccaggatgacatattgttccat
cagttgacagtgtcagaacatctctatttctactgcgtgataaaaggagtacctccaaaa
acacgttctaaagaaattaacaaaatgctgctatcttttgacctgatagaaaagcgtgat
gccctttcaaagtcactgagtggaggaatgaagcgtaaactctccattattatcgcactt
ataggcgactccaaggtggtgatacttgatgagccaacatctggcatggacccagtctca
aggagattcacctgggatgtccttcagaagcataaagagaatcgtaccatcttattgaca
acccaccacatggatgaagctgatgtcctgggtgaccgtatagctatcatggtgaagggt
actctgcagtgctgtggctctacaattttcctgaaaaaagtttatggtgtgggataccac
ttaattattgtaaaggatcctcattgtgatgttaaagaaatctccaaactgattaaatat
cacgtaccagaagccaaattggagaacaatgttgcagctgaattatcattcatcctaccc
aaggagtacgcaaacaggtttaaagatctatttactgaaatggaaaacagacaggaagag
ttgggtattgctagctttggtatctccatcactaccatggaagaggttttcattagggtc
agtcaatcgaataatccgattttgcagaccctaaaaagtgaagatgaaagtgaagacaca
aatcagaatatgaatgtccctagaaatttcgagagatcatatttttcctccaacttgaat
gagcactctaatattacatttaatactgggtggactctttacagtcagcagttctttgcc
atgttcatgaaaagagcaatgttctcttggcgcaactggaatttgatcttgctgcagata
cttgcactcctgggtattttttattttttgatgagtgatgtggagttttcaagaggtgaa
gaacttgagagagaaatggatttggaacaatatggtgaaacaattgtgcccttctcaatt
tctggaaattctgagtttactacgaatttcgtaaaaaatcttgagatcttgctaaaggct
aagaaacagaaacttcacgaagtaaaaggtgatctgaaggcctatttggtgggtaatcaa
aaatgcatttactcatgcattattgcattttccattgaggttaatggaaatgaaagtata
gttaactttttgttcaacaatgaggcataccattcatcatcactatctctggctgtatta
gacaatgttatttttatgtcactttctggccctgatgcttccattacagtcatcaacaaa
cctcagcctgcacgttctgcttttgatggacctgagtattcagtgatgacaggaacacaa
gtagccttaaatttgtattttggtgtgagtattcttgtcagtggcttttgtctcctaaca
gtgagtgagagagtcactaaggcgaagcacattcagtttttgagtggggtttatgccctt
aatttctggctctctgctctactatgggacttcctcatcttcttcatttcctgctgctta
ctattggtggtgttcatgttctctgacttgaaaatattggtcacggattaccgccttctg
gatacattgctcatcttcatcgtgtttggctggtctgtcatccccttcatgtacctgata
agtttcctgttttctagtcataccagtgcctacaccaagctcgtcatatttaactactgt
gcagggattgttggtgcggtagcagatttatttataacctcaattcagggtaaagaagct
gcttctagaagcatcctgcttaatgcaatgatggtgttacctatacataattttgggatg
agcatcagccggcattatgatatccagcacacaaaattggcatgtgcctcacagggaaag
gtttctcccattatggattgtagtaaagcagtaactgaacgtagtatatataccttggaa
cgtgatgcagttggaagatatttaattgcaatggctgtcacaggacttcttttcctcctc
ttgatattccttctggagaccaccttgtggaaattgaaaacctttgtgtttcgctacatt
ttgtttggtattttcaaaaaatacaataaggatagagtgtccaaggaattatctggggaa
tctgaagatgaagatgtacaaaatgaaagaaatagaatcctggagcaccctcagaagtca
ctgaattctgtagtgcttattaaggaactcacgaaggtgtattttgcaactccagtcgtt
ttagctgtgagaaatatctctgttgcaatccaaaagcaggagtgctttgggttgcttgga
ttaaatggagctgggaaaactactaccttccaaattttgactggagaggaggttgcttcc
tctggggatgtgttcgttaagcacctcagcatcaccaaaaatatcctaaaggtaagatca
aaaattggttattgcccacaatttgatgccttactggattacatgactgctcgagaaata
atgatcatgtatgccagattgtgggggattcctgagaccaaaattaacaattatgtaaag
aagtcaattcaagcactgaatctggaaccctatgctgacaagtatatttacacttacagt
ggaggaaacaaacgtaggctgagtactgctattgccctcatgggaaagccctcagtcatc
ttcctggatgaaccatcaactggtatggacccagtagcccggcgcctactctggaacgca
gtgacacggacacgtgaaagtggcaaagcaatcatcataacatctcacagtatggaggaa
tgcgatgctctttgtactaagctggccatcatggtgaagggaaagttcatgtgcctgggc
agccctcagcatctcaagaacaaatttggcaatgtttacatactaaaagtcaagatcaat
attgatgaaaatgagaatcaattagagcattttaaaactttcattgaaacagctttccca
ggtagtgaattaaaacatgagaatcgagggatcattaactactacgttcccagcaagaac
aatagctggggaaagatgtttggtattttggaggaagctaaagaagaattcaatttagaa
gactattccatcagtcagataacgctggaacaagtcttcctgacttttgctggcagtcag
aacccagaagttgagaaaaaagagtcttga
DBGET
integrated database retrieval system
