Oryx dammah (scimitar-horned oryx): 120882549
Help
Entry
120882549 CDS
T07255
Name
(RefSeq) TAF5-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 5L
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
oda
Oryx dammah (scimitar-horned oryx)
Pathway
oda03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
oda00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
120882549
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
oda03021
]
120882549
03036 Chromosome and associated proteins [BR:
oda03036
]
120882549
Transcription machinery [BR:
oda03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
120882549
Coactivators
SAGA/TFTC/STAGA complex
120882549
Chromosome and associated proteins [BR:
oda03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
120882549
STAGA complex
120882549
TFTC complex
120882549
SAGA complex
120882549
SLIK complex
120882549
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_CDC20-Fz
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
TFIID_NTD2
EIF3I
WD40_MABP1-WDR62_2nd
WDR55
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
Beta-prop_TEP1_C
Beta-prop_WDR75_1st
Beta-prop_IFT140_1st
WD40_MABP1-WDR62_1st
Beta-prop_RIG_2nd
Beta-prop_IFT122_1st
WDR90_beta-prop_4th
ANAPC4_WD40
Beta-prop_SCAP
NBCH_WD40
Beta-prop_SPT8
RMC1_N
WD40_RFWD3
Beta-prop_EIPR1
Beta-prop_HPS5
Beta-prop_DCAF4
Beta-prop_Vps41
Beta-prop_WDR19_1st
PEP5_VPS11_N
eIF2A
PROPPIN
Ge1_WD40
WDR54
Beta-prop_DCAF12
Motif
Other DBs
NCBI-GeneID:
120882549
NCBI-ProteinID:
XP_040122496
LinkDB
All DBs
Position
Unknown
AA seq
583 aa
AA seq
DB search
MAQFRTEEMQTAVSCYLKRRQYRGGDGPPKQGLQLSQSVQDMATRLAVQSESGCANTVSC
QADPQQYEVQFGRLWDFLMDSDSQHSDKLMPLLYPLFVYLHLDLVQNSSKSTAESFYSRF
HGMFLQNASQKDVIEQLQTTQTIQDILSNFRLRAFLDNKYVVRLPEDSYNYLLCYLQSDN
NTALCRVLTWHIHLDVHPAERMDYQLYASGGSSSGQGGGLEPTDLPMYILQKEEDLDILQ
ETIKCIQDGPPSLTTIYTYTFYNTEELLNTAEASPDNKLLAAGFNNSCIKLWSLTSKFKS
KPHQVDMSRIHLTYDTLEVDEEDKTAKEMKVLQGHCGPVYSTRFLPDSSALLSCSEDTSI
RYWDLESFTNTVLYQGHAYPVWDLDISPHSLFFASASYDRTARLWSFDRTYPLRIYAGHL
ADVDCVKFHPNSNYLATGSTDKTVRLWSAQQGNSLRLFTGHCGPVRCLAFSPNGQYLVSA
GEDQLLKLWDLASGTLYKELQGHTDDITSVTFSLDSSLIASASMDNSVRIWDIKSKYNST
PADGSSSELLGVYTSQMSNVLNVQFMAGNCLLVTGIREENQEH
NT seq
1752 nt
NT seq
+upstream
nt +downstream
nt
atggcgcagtttcgcaccgaggagatgcagacggccgtgtcctgctacctcaaacgccgg
cagtaccggggcggggacggcccaccgaagcaaggcctgcaactgtcacagagcgtccag
gatatggctaccagactcgcagtccagtcagaatctggttgtgccaacacagtgtcttgc
caggcagacccccagcaatatgaagtacagttcggacggctgtgggattttctcatggac
tctgactcccagcatagcgacaaactgatgcctctcctctaccctctgtttgtctacctc
catctcgacctggtccagaacagttcaaagagcacagcggaaagcttttacagccgcttc
catggaatgtttctccagaatgccagccagaaggacgtcattgagcagctccagaccacc
cagaccatccaagacatcctgtctaacttccggctgcgggccttcctggacaacaagtac
gtggttcgtctgccggaagacagctacaactaccttctctgctacctccagagtgacaac
aacaccgcgctgtgcagagtcctcacctggcacatccacctggacgtgcaccccgccgag
aggatggactaccagctctatgccagcggtggctcctccagcggccagggtggtggcctg
gagcccaccgacctgcccatgtacatcctgcagaaagaggaggatctggacatccttcag
gagaccatcaagtgcatccaggatggccccccctccctcactaccatctacacctacacc
ttctacaacactgaggagctgctgaacacggcggaggcctcccccgacaacaagctgctc
gccgcgggctttaacaactcctgtataaaactgtggagtctgacttccaagtttaaatcc
aagccccatcaagtagacatgtcccgcatccacttgacttatgatacgctcgaggtcgac
gaggaggacaagacagccaaggagatgaaggttctgcagggacactgcgggccggtgtac
agcactaggttcctcccggacagctcggcgctactctcctgctctgaagacacgtccatc
aggtactgggacctggagagcttcactaacaccgtgctgtaccagggccacgcctacccc
gtgtgggacctggacatcagcccgcacagcctgttctttgccagcgcgtcctacgaccgc
acggcgcggctgtggtcgtttgatcggacttacccactgcgaatctacgccgggcacctg
gcggatgtggactgtgtcaagttccaccccaattcaaactatttagccacgggctcgaca
gacaagacggtgcggctgtggagtgcccagcaggggaactcgctgagactcttcacaggc
cactgcggccccgtgcgctgtctggccttttcccccaacggtcagtacctggtgtcagcg
ggcgaggaccagctgctgaagctgtgggacctggcatctgggaccctctacaaagagcta
cagggccacacagatgacatcaccagcgtcaccttcagcctggacagcagcctgattgca
tcagcatccatggataactccgtgcgtatctgggacatcaagagcaagtacaacagcacg
cccgccgatggctcgtccagtgagctcctgggcgtctacaccagccagatgagcaatgtg
ctgaatgtgcagttcatggctggcaactgcctgctggtgaccggaatcagagaagaaaat
caggaacactga
DBGET
integrated database retrieval system
