Oryx dammah (scimitar-horned oryx): 120883150
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Entry
120883150 CDS
T07255
Symbol
PCDH20
Name
(RefSeq) protocadherin-20
KO
K16498
protocadherin delta 1
Organism
oda
Oryx dammah (scimitar-horned oryx)
Pathway
oda03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
oda00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
120883150 (PCDH20)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
oda01009
]
120883150 (PCDH20)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
oda04515
]
120883150 (PCDH20)
Protein phosphatases and associated proteins [BR:
oda01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
120883150 (PCDH20)
Cell adhesion molecules [BR:
oda04515
]
Cadherins
Protocadherins
120883150 (PCDH20)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_CELSR2_9th
Motif
Other DBs
NCBI-GeneID:
120883150
NCBI-ProteinID:
XP_040123082
LinkDB
All DBs
Position
Unknown
AA seq
951 aa
AA seq
DB search
MRGGGDACGLRAGVVSWSRATWRPRPDMGSLSRPSSSASHRNLPHLLLFFLFVRPFNCLA
SYSRATEILYSLNEGLPAGVLIGSLAEDLRLLPSAGGQDLQSQSPQHSVAERNPPLSFSL
ASQGLSGQYVTLDNRSGELHTSAQEIDREALCLEGGRGTAWRGSVSISSSPSADSCLLLL
DVLVLPQEYFRFVKVKIAIRDINDNAPRFPISQISVWVPENAPVNTRLAIEHPAVDPDMG
TNGVQTYRLLDYHHMFTLDVEENENGERTPYLIVMGLLDRETQDQYVSIIIAEDGGSPPL
IGSATLTIGISDINDNCPLFTDSQINITVYGNATVGTPIAAVQAVDRDLGNNAQITYSYS
QKVPQASKDLFHLNENTGVIKLFSKIGGSVLQTHKLTILANGPGCIPAVITALVTIIKVI
FRPPEIVPRYIANEIDGIIYLKELEPINTPIAFFTIRDPEGKYKVNCYLEGEGPFRLLPY
KPYSNEYLLETTKPMDYELQQFYEIAIVAWNSEGFQVKKIIKVQLLDDNDNAPVFLQPLV
ELTIEENNAPNAFLTKLDATDADSGERGQVSYFLGPDAPSYFSLDSVTGILTVSTQLDRE
EKETYRYTVRAIDSGKPPQESVATVIITVLDKNDNSPRFINKDFSFFVPENFPGYGEIGV
ISVTDADTGQNGWVALSVVNQSDIFVIDTGKGLLRAKVSLDREQQSSYTLWVEAVDGGMP
PLSSTAKITILLLDINDNPPLVLFPQSNMSYLLVLPSTLPGSLVTEVYAVDKDTGMNAVI
AYSIIGRRGPRPESFRIDPKTGNITLEEALLQTDYGLHRLLVKVSDHGYPEPLHSTVMVN
LFVNDTVSNESYIENLLRKEPEISIEEKEPQISIEPTQRKGESVSCMPTLVALSVISLSS
ITFLTGMGIYICLRREKKHHREDDNLEVQTPLKGKIDLHMKERKPIDISNI
NT seq
2856 nt
NT seq
+upstream
nt +downstream
nt
atgcgaggcggcggggatgcgtgcggcttgcgggccggagtagtgagctggagtcgggcg
acctggcgcccgcgcccggatatggggagtctcagtcgtcctagcagcagcgccagccac
cgaaacctgccgcatctgcttctgtttttcctcttcgtgagaccgttcaactgtctggcg
agttacagccgggccacggagattctgtacagcctgaacgaggggctaccggcgggggtg
ctcatcggcagcctggcggaggacctgcggctgctgcccagcgccggggggcaggacctg
cagtctcagtcgcctcagcacagcgtcgccgagaggaaccctcctctctccttcagcctg
gcctcccagggactgagtggccagtacgtgaccctagacaaccgctcaggggagctacac
acttctgcccaggagatcgaccgggaggccttgtgtcttgaaggaggcagagggactgcc
tggcggggcagcgtttccatctcctcttcgccttcggctgactcttgtcttttgcttctg
gatgtcctagtcctgcctcaggaatactttaggttcgtgaaggtaaaaatcgctatccgg
gacatcaatgacaatgccccgcggtttcctatttcccaaatatcagtttgggtcccagaa
aatgcacctgtaaacacccggctggccatagagcatcctgccgtggacccagatatgggc
actaatggtgttcagacctaccgcttgctggactaccatcatatgttcaccctggacgtg
gaggagaatgagaatggggagcgcaccccctacctgattgtcatgggactgttggacaga
gagacccaggaccagtatgtgagcatcatcatagctgaggatggtgggtctccaccactg
ataggcagtgccacccttaccattggcataagtgacattaatgacaattgcccacttttc
acagactcacaaatcaacatcaccgtgtatgggaatgctactgtgggcacaccaattgca
gctgttcaggctgtggacagagacttgggaaacaatgctcagatcacctactcttacagt
cagaaggttccacaagcatccaaggatttattccatttgaatgaaaacaccggggtcatt
aaacttttcagtaagatcggaggaagtgttctgcaaacacacaagctcaccatccttgct
aatggaccaggctgcatccctgctgtgatcactgccctggtgactattatcaaagtcatt
ttcaggccacctgaaatcgtccctcgttatatagcgaatgagatagatggtattatttac
ctgaaagaattggaacctattaacactccaattgcattctttaccataagagatccagaa
ggtaaatacaaggtaaactgctacctggaaggtgaaggaccatttaggttattgccctac
aaaccatatagtaatgagtatcttctagaaacgacaaaacctatggattatgagctacag
caattctatgaaatagccatagtagcttggaactctgagggatttcaagttaaaaaaatt
attaaagtgcaacttttagatgacaatgataatgctcctgttttccttcaacccttggta
gaactaaccattgaagaaaataatgcacccaatgcctttttgactaagctagatgctaca
gatgctgacagtggagagaggggccaagtttcatattttctgggacctgatgctccatca
tatttttccttagacagtgtcacaggaattctgacagtttctactcagctggatcgagag
gagaaagaaacgtataggtacacagtcagagctattgactcggggaagccaccccaagaa
tcagtagctactgttattatcacagtgttggataaaaatgacaacagccctaggttcatc
aacaaggacttcagcttctttgtgccagaaaattttccaggatatggtgaaattggagta
attagtgtcacagatgccgatactgggcaaaacggatgggttgctctctccgtggtaaac
cagagtgatatttttgtcatagacactggaaagggcctgctgagagctaaagtctctttg
gacagagagcagcaaagctcctacactttgtgggttgaagccgtcgatgggggtatgcct
cccctctcctctactgcaaaaatcacaattctccttctagatattaacgacaacccacct
ctcgttttatttcctcagtctaacatgtcttacttgttggtgttgccttctactctccct
ggctcactagttacagaggtctatgcagttgacaaagacacaggcatgaatgctgtcata
gcctatagcatcatagggagaagagggcctaggcctgaatcctttagaattgaccctaaa
actggcaacattactttggaggaggcattgctgcagacagattatgggctccatcgttta
ttggtgaaagtgagtgatcatggttatccagaacctctccattccacagtcatggtgaat
ctatttgtcaatgacactgtcagtaatgagagctacattgagaatcttttaagaaaggaa
ccagaaattagcatagaagagaaagaaccacagatttcaatagaaccaactcaaaggaaa
ggtgaatccgtgtcctgtatgcccacattagtagctctatctgtaataagcttgagttct
atcacattcttaacagggatgggcatatatatctgtttaaggagagaaaagaaacaccat
agggaggatgacaatttggaagtacaaactccattaaaaggaaaaattgacttgcatatg
aaagagaggaaaccaatagatatatctaatatttga
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