KEGG   Oryx dammah (scimitar-horned oryx): 120883367
Entry
120883367         CDS       T07255                                 
Symbol
COL4A2
Name
(RefSeq) collagen alpha-2(IV) chain
  KO
K06237  collagen type IV alpha
Organism
oda  Oryx dammah (scimitar-horned oryx)
Pathway
oda04151  PI3K-Akt signaling pathway
oda04510  Focal adhesion
oda04512  ECM-receptor interaction
oda04820  Cytoskeleton in muscle cells
oda04926  Relaxin signaling pathway
oda04933  AGE-RAGE signaling pathway in diabetic complications
oda04974  Protein digestion and absorption
oda05146  Amoebiasis
oda05165  Human papillomavirus infection
oda05200  Pathways in cancer
oda05222  Small cell lung cancer
Brite
KEGG Orthology (KO) [BR:oda00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04151 PI3K-Akt signaling pathway
    120883367 (COL4A2)
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    120883367 (COL4A2)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    120883367 (COL4A2)
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    120883367 (COL4A2)
 09150 Organismal Systems
  09152 Endocrine system
   04926 Relaxin signaling pathway
    120883367 (COL4A2)
  09154 Digestive system
   04974 Protein digestion and absorption
    120883367 (COL4A2)
 09160 Human Diseases
  09161 Cancer: overview
   05200 Pathways in cancer
    120883367 (COL4A2)
  09162 Cancer: specific types
   05222 Small cell lung cancer
    120883367 (COL4A2)
  09172 Infectious disease: viral
   05165 Human papillomavirus infection
    120883367 (COL4A2)
  09174 Infectious disease: parasitic
   05146 Amoebiasis
    120883367 (COL4A2)
  09167 Endocrine and metabolic disease
   04933 AGE-RAGE signaling pathway in diabetic complications
    120883367 (COL4A2)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:oda04147]
    120883367 (COL4A2)
   00536 Glycosaminoglycan binding proteins [BR:oda00536]
    120883367 (COL4A2)
Exosome [BR:oda04147]
 Exosomal proteins
  Exosomal proteins of other cancer cells
   120883367 (COL4A2)
Glycosaminoglycan binding proteins [BR:oda00536]
 Heparan sulfate / Heparin
  Extracellular matrix molecules
   120883367 (COL4A2)
SSDB
Motif
Pfam: Collagen C4
Other DBs
NCBI-GeneID: 120883367
NCBI-ProteinID: XP_040123384
LinkDB
Position
Unknown
AA seq 1710 aa
MDRELRAAARPALRRWLLLGAVTVGLLAQSVLAGVKKLDMPCGGRDCSGGCQCYPEKGGR
GQPGPVGPQGYTGPPGLQGFPGLQGRKGDKGERGAPGITGPKGDVGPRGVSGFPGADGIP
GHPGQGGPRGPPGYDGCNGTMGDSGYAGPQGPGGFLGPRGPQGPKGQKGEPYALSSEDRD
KYRGEPGEPGLVGLQGPPGRPGPVGQMGPVGAPGRPGPPGPPGPKGQPGNRGLGFYGEKG
EKGDMGLQGPGGIPPDNGYVEKPTPAYELLPEQYKGEKGSEGEPGRIGVSSKGEEGVMGF
SGPRGGPGFDGEKGSPGQKGSRGLDGYQGPDGLPGPKGEMGDPGPPGLPAYSPHPSVAKG
VRGEPGSPGAPGEPGARGEPGDPGLPGRPGTTIGDEDEKRGLPGEMGPKGFTGERGFPAL
YPGRPGTDGKPGLRGPPGRPGPPGPDGFLFGRKGERGSGGFPGSSGFPGARGQKGWKGDA
GDCKCADQFIRGPPGLPGPKGFAGANGQPGSKGSQGDPGPHGNPGFSGFKGAPGNVGPPG
PKGMKGDSRTITTKGERGQPGVPGVPGLKGSDGIPGPPGLDGFHGLPGPPGDGIKGPSGD
RGQPGAPGTKGLPGERGPPGLGLPGPKGEHGFPGDAGLPGPPGFPGPPGLPGAPGQLDCD
SGVKRPIGADGQEPIQPGCVGGPKGSPGQPGLPGPPGAKGLRGVPGFSGADGAPGLKGLP
GDPGREGFPGPPGFMGPRGSKGAVGPPGLDGLPGASGLPGPVGPPGDRGLPGEVLGAQPG
PRGDSGLPGRPGLKGPPGERGSPGFRGSQGMPGMPGQKGQPGSPGLSGQPGLPGPPGQHG
FPGAPGREGPLGPPGAPGFEGLPGDRGEPGDTGVPGPVGMKGGSGDRGDPGQQGERGYPG
LPGFKGVSGMPGTPGLKGARGSPGMDGFEGMLGLKGRPGLPGIKGEAGFFGIPGLKGLAG
EPGVKGSRGDPGPPGPPPIILPGMKDIKGEKGDEGPMGLKGYLGLKGLPGMPGIPGLSGI
PGLPGRPGHIKGVKGDTGVPGVPGSPGFPGVPGSPGVMGFQGFTGSRGDKGAPGRAGFFG
EVGPTGDFGDIGDTIDLPGSPGLKGERGTTGIPGQKGFFGERGTEGDVGFPGITGLAGVQ
GPPGFQGQKGFPGLTGLQGPQGDPGRAGAPGIKGDSGWPGNPGLPGLPGLRGISGLHGLP
GSKGFPGSPGADVHGDPGFPGPAGDKGDPGEANTLPGPTGAPGQKGERGAPGERGPIGSP
GLQGFPGITPPSNISGSPGDIGAPGIFGLEGYRGPPGPPGPAALPGSKGDEGSPGTPGSP
GIKGWIGDPGPQGRPGVFGLPGEKGPKGEPGFMGNIGPTGSPGDRGPRGPKGDRGLPGAP
GAVGAPGIAGIPQRIAIERGPVGPQGRRGPPGAQGEMGPQGPPGEPGFRGAQGKAGPQGR
GGVSAIPGFRGDQGPVGLQGPVGFEGEPGRPGSPGLPGMPGRSISIGYLLVKHSQTDKEP
MCPVGMNKLWSGYSLLYFEGQEKAHNQDLGLAGSCLARFSTMPFLYCNPGDICYYASRND
KSYWLSTTAPLPMMPVAEEDIRPYISRCSVCEAPAVAIAVHSQDVSIPHCPAGWRSLWIG
YSFLMHTAAGDEGGGQSLVSPGSCLEDFRATPFIECNGARGTCHYYANKYSFWLTTIPEQ
DFQGAPSADTLKAGLIRTHISRCQVCLKNL
NT seq 5133 nt   +upstreamnt  +downstreamnt
atggacagagagctgcgcgccgcggcgcgccctgccctacggcggtggctgctgctgggg
gccgtgaccgtggggctgctggcccagagcgtcctggcgggtgtgaagaaattggacatg
ccttgtggaggcagagactgcagcgggggctgccagtgctaccccgagaaaggagggcgg
ggccagccaggaccggtgggcccccaggggtacaccgggccccctgggctacaggggttc
ccaggactgcaaggccgcaaaggagacaagggcgaaaggggagctcccgggatcacaggc
ccgaagggagacgtgggaccaagaggtgtttcgggattccccggtgccgacggaattccc
ggccatcccgggcaaggcggacccagaggacctccagggtatgacggctgcaatgggacc
atgggcgattcaggctacgcaggaccccagggccccggcggcttcctcgggccccgcggg
ccccaaggaccgaaagggcagaaaggtgagccctacgctctgtcctcagaggaccgcgac
aaataccggggggaacctggagagcccggactggttggcttgcaggggcctcccggccgc
cctgggcccgtgggacagatgggtccggttggagccccaggaagaccgggaccacctgga
ccccctggacccaaaggacagccaggcaaccgaggacttggtttttatggagaaaaaggc
gaaaagggcgacatggggctgcagggacccggcgggattccaccggacaacggttacgtc
gagaagcccacaccggcgtacgagcttctcccagagcagtataagggtgaaaaaggaagc
gagggagaaccagggagaataggcgtctcctcgaagggagaagaaggcgtcatgggcttc
tcgggaccacggggtggccccggcttcgacggtgagaagggctcgccgggacagaaagga
agcagaggactggatgggtaccaaggccctgacggattgccaggacccaagggagaaatg
ggcgacccaggcccccccggcctcccagcctactccccgcatccttccgtggccaaaggt
gtcagaggtgagccgggatccccaggagcccccggggagccaggagcccgcggggagcca
ggagaccccggtctgccaggccggccgggcacgaccatcggagacgaagatgagaagaga
ggcttgccgggcgagatgggacccaaaggcttcacaggagaacggggtttccccgcgctg
taccccggccgcccgggaaccgatgggaagccagggctccgcggtccccccgggcgccca
ggaccgcccggcccagacggttttctgttcggccggaaaggagaaagaggaagtgggggc
ttccctggctcctccgggttcccaggggctcgtggacagaaaggatggaaaggtgacgcc
ggcgactgtaaatgtgcagaccagttcatcaggggtcctccagggctgccaggacccaag
ggctttgcaggtgccaacgggcagcctggcagtaaaggcagccaaggagaccccggcccg
cacggcaaccccgggttctccgggttcaagggagcccctggtaatgtcggtccccccggg
cccaaagggatgaagggagactccaggaccatcaccaccaaaggtgagcggggccagcca
ggtgtcccaggcgtgccagggctgaaaggtagcgacggcatcccaggaccacccgggctc
gatgggttccacgggctccctggcccgcccggcgatggcatcaaaggcccctcaggggac
agaggccaaccaggagcccccggcactaagggccttccaggggagaggggccccccagga
ctgggcctgccaggccccaaaggcgagcacggcttccccggcgatgctggattgcccgga
ccaccaggcttcccggggcctcccggcctccccggcgctccaggacagctcgattgtgac
tcgggtgtgaaaagacccatcggagcagacggacaggagcccatccagccaggttgtgtt
ggaggacccaagggatccccaggccagcccggtctccccggccccccaggtgccaaaggc
ctcagaggagttccaggattttcaggagccgacggagcgccagggctcaagggtctccca
ggagatccaggtcgagagggattcccaggacccccagggttcatgggaccccgcggctcc
aaaggtgcagtgggcccccctggcctggatggactccctggcgcctctggcctaccgggg
ccagttgggcccccaggggacaggggccttcctggagaagtgctgggggcccagcccggg
ccccggggagactctggactgcctggacgtcccggactgaagggccctcccggagagaga
ggctcgcctggcttcaggggaagccagggcatgccagggatgccgggccagaagggccag
ccgggctccccaggactctcgggccagccgggactgccagggcctccaggacagcacggc
ttcccaggagcgcctggtcgggaggggcccctggggcccccgggcgcccccggctttgaa
ggtctgcctggagacagaggggagccgggggacaccggcgtccctggccccgtgggcatg
aagggcggctctggggacagaggtgaccctgggcagcagggagagagaggctaccccgga
ctccccggatttaaaggagtgtctggaatgcctggtaccccaggactgaaaggggccagg
ggctcccccgggatggacggcttcgaaggcatgctcggcctcaagggcagacccgggctc
ccaggaatcaaaggagaggcagggtttttcggaattccggggctgaagggcctggctggt
gagccgggtgtgaaaggcagccgaggagaccctgggcccccaggaccaccccccatcatc
ctgccgggaatgaaagacatcaaaggagagaagggagatgaaggccccatgggactgaaa
ggatacctgggcctgaaaggccttcccggaatgccaggcatccctgggctgtcgggaatc
ccggggctgcccgggagacctggccacatcaaaggggtcaaaggagacactggagtcccc
ggcgtgcccggctccccggggttccctggcgtgcccggctcccccggagtcatggggttc
caaggcttcacgggcagtaggggtgacaagggtgcccccgggagagcaggcttcttcggc
gaggtcggccccaccggtgacttcggtgacatcggagacacgatagatctgcccgggagc
ccaggcctgaagggggagcggggcaccaccggaataccaggtcaaaagggatttttcggc
gagaggggcactgagggtgatgtcggctttccagggatcaccggcctggccggagtccag
ggaccccctggattccaagggcaaaaaggctttccaggactcacagggctccaggggcct
cagggagatccgggacgggctggagcacccggcatcaaaggagactctggctggccaggg
aacccaggcttaccaggtctgcccggcctccgaggcatcagcggattgcacggtttgcca
ggcagcaaaggcttcccgggatccccaggtgcagacgtccacggggaccccggattccca
ggccctgccggggacaagggtgacccaggggaggccaacacccttccaggccccacggga
gccccgggacagaagggcgagcgtggagctccaggggagcgaggcccaatcgggagtcct
ggccttcagggctttccaggcatcacccctccctccaacatctctgggtcacctggggac
atcggcgcgcccggcatattcggcctggaaggttatcgagggcccccggggccgcctggg
cctgcagctcttcccggaagcaaaggtgatgaggggagtcctggaacccccggaagcccc
gggatcaaaggatggatcggcgaccccgggccccagggccggcctggcgtgttcgggctc
ccaggagaaaaagggcccaaaggggagccaggattcatgggcaacataggccccaccggg
agcccgggcgaccgaggccccaggggacccaaaggagaccgaggactcccaggtgcccct
ggtgccgtgggggctccaggcatcgcaggaatcccccagaggatcgcgatcgagcggggc
ccagtgggtccacagggcaggagaggccccccaggggctcagggggagatggggccgcag
ggcccccccggagaaccaggtttccgcggggcgcagggcaaggccgggccccagggacga
ggcggtgtgtcggccattcccggattccgtggagaccaggggcccgtggggctgcaggga
ccggtgggctttgaaggggagccgggccgccccggaagccccggcctgcccggcatgccc
ggccgaagcatcagcatcgggtacctcctggtgaagcacagccagaccgacaaggagccc
atgtgccccgtgggcatgaacaagctctggagcgggtacagcctgctctacttcgagggc
caggagaaggcccacaaccaggacctggggctggcgggctcctgcctggcgcgattcagc
accatgccgttcctgtactgcaaccccggcgacatctgctactacgccagccgtaacgac
aagtcctactggctgtccaccaccgccccgctgcccatgatgcccgtggccgaggaggac
atccggccctacatcagccgctgctccgtgtgcgaggccccggccgttgccatcgcagtc
cacagccaagatgtctccatcccccactgcccggccgggtggcgcagcttgtggatcgga
tactccttcctcatgcacacggccgccggtgacgaaggaggcggccagtcgctggtgtcg
ccgggcagctgcctggaggacttccgcgccacgccgttcatcgagtgcaacggggcccgc
ggcacgtgccactactacgccaacaaatacagcttctggctgaccaccatcccggagcag
gacttccagggcgcgccctctgccgacacgctcaaggccggtctcatccgcacgcacatc
agccgctgccaagtgtgcctgaagaacctgtga

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