Oryx dammah (scimitar-horned oryx): 120883367
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Entry
120883367 CDS
T07255
Symbol
COL4A2
Name
(RefSeq) collagen alpha-2(IV) chain
KO
K06237
collagen type IV alpha
Organism
oda
Oryx dammah (scimitar-horned oryx)
Pathway
oda04151
PI3K-Akt signaling pathway
oda04510
Focal adhesion
oda04512
ECM-receptor interaction
oda04820
Cytoskeleton in muscle cells
oda04926
Relaxin signaling pathway
oda04933
AGE-RAGE signaling pathway in diabetic complications
oda04974
Protein digestion and absorption
oda05146
Amoebiasis
oda05165
Human papillomavirus infection
oda05200
Pathways in cancer
oda05222
Small cell lung cancer
Brite
KEGG Orthology (KO) [BR:
oda00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
120883367 (COL4A2)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
120883367 (COL4A2)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
120883367 (COL4A2)
09142 Cell motility
04820 Cytoskeleton in muscle cells
120883367 (COL4A2)
09150 Organismal Systems
09152 Endocrine system
04926 Relaxin signaling pathway
120883367 (COL4A2)
09154 Digestive system
04974 Protein digestion and absorption
120883367 (COL4A2)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
120883367 (COL4A2)
09162 Cancer: specific types
05222 Small cell lung cancer
120883367 (COL4A2)
09172 Infectious disease: viral
05165 Human papillomavirus infection
120883367 (COL4A2)
09174 Infectious disease: parasitic
05146 Amoebiasis
120883367 (COL4A2)
09167 Endocrine and metabolic disease
04933 AGE-RAGE signaling pathway in diabetic complications
120883367 (COL4A2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
oda04147
]
120883367 (COL4A2)
00536 Glycosaminoglycan binding proteins [BR:
oda00536
]
120883367 (COL4A2)
Exosome [BR:
oda04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
120883367 (COL4A2)
Glycosaminoglycan binding proteins [BR:
oda00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
120883367 (COL4A2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
120883367
NCBI-ProteinID:
XP_040123384
LinkDB
All DBs
Position
Unknown
AA seq
1710 aa
AA seq
DB search
MDRELRAAARPALRRWLLLGAVTVGLLAQSVLAGVKKLDMPCGGRDCSGGCQCYPEKGGR
GQPGPVGPQGYTGPPGLQGFPGLQGRKGDKGERGAPGITGPKGDVGPRGVSGFPGADGIP
GHPGQGGPRGPPGYDGCNGTMGDSGYAGPQGPGGFLGPRGPQGPKGQKGEPYALSSEDRD
KYRGEPGEPGLVGLQGPPGRPGPVGQMGPVGAPGRPGPPGPPGPKGQPGNRGLGFYGEKG
EKGDMGLQGPGGIPPDNGYVEKPTPAYELLPEQYKGEKGSEGEPGRIGVSSKGEEGVMGF
SGPRGGPGFDGEKGSPGQKGSRGLDGYQGPDGLPGPKGEMGDPGPPGLPAYSPHPSVAKG
VRGEPGSPGAPGEPGARGEPGDPGLPGRPGTTIGDEDEKRGLPGEMGPKGFTGERGFPAL
YPGRPGTDGKPGLRGPPGRPGPPGPDGFLFGRKGERGSGGFPGSSGFPGARGQKGWKGDA
GDCKCADQFIRGPPGLPGPKGFAGANGQPGSKGSQGDPGPHGNPGFSGFKGAPGNVGPPG
PKGMKGDSRTITTKGERGQPGVPGVPGLKGSDGIPGPPGLDGFHGLPGPPGDGIKGPSGD
RGQPGAPGTKGLPGERGPPGLGLPGPKGEHGFPGDAGLPGPPGFPGPPGLPGAPGQLDCD
SGVKRPIGADGQEPIQPGCVGGPKGSPGQPGLPGPPGAKGLRGVPGFSGADGAPGLKGLP
GDPGREGFPGPPGFMGPRGSKGAVGPPGLDGLPGASGLPGPVGPPGDRGLPGEVLGAQPG
PRGDSGLPGRPGLKGPPGERGSPGFRGSQGMPGMPGQKGQPGSPGLSGQPGLPGPPGQHG
FPGAPGREGPLGPPGAPGFEGLPGDRGEPGDTGVPGPVGMKGGSGDRGDPGQQGERGYPG
LPGFKGVSGMPGTPGLKGARGSPGMDGFEGMLGLKGRPGLPGIKGEAGFFGIPGLKGLAG
EPGVKGSRGDPGPPGPPPIILPGMKDIKGEKGDEGPMGLKGYLGLKGLPGMPGIPGLSGI
PGLPGRPGHIKGVKGDTGVPGVPGSPGFPGVPGSPGVMGFQGFTGSRGDKGAPGRAGFFG
EVGPTGDFGDIGDTIDLPGSPGLKGERGTTGIPGQKGFFGERGTEGDVGFPGITGLAGVQ
GPPGFQGQKGFPGLTGLQGPQGDPGRAGAPGIKGDSGWPGNPGLPGLPGLRGISGLHGLP
GSKGFPGSPGADVHGDPGFPGPAGDKGDPGEANTLPGPTGAPGQKGERGAPGERGPIGSP
GLQGFPGITPPSNISGSPGDIGAPGIFGLEGYRGPPGPPGPAALPGSKGDEGSPGTPGSP
GIKGWIGDPGPQGRPGVFGLPGEKGPKGEPGFMGNIGPTGSPGDRGPRGPKGDRGLPGAP
GAVGAPGIAGIPQRIAIERGPVGPQGRRGPPGAQGEMGPQGPPGEPGFRGAQGKAGPQGR
GGVSAIPGFRGDQGPVGLQGPVGFEGEPGRPGSPGLPGMPGRSISIGYLLVKHSQTDKEP
MCPVGMNKLWSGYSLLYFEGQEKAHNQDLGLAGSCLARFSTMPFLYCNPGDICYYASRND
KSYWLSTTAPLPMMPVAEEDIRPYISRCSVCEAPAVAIAVHSQDVSIPHCPAGWRSLWIG
YSFLMHTAAGDEGGGQSLVSPGSCLEDFRATPFIECNGARGTCHYYANKYSFWLTTIPEQ
DFQGAPSADTLKAGLIRTHISRCQVCLKNL
NT seq
5133 nt
NT seq
+upstream
nt +downstream
nt
atggacagagagctgcgcgccgcggcgcgccctgccctacggcggtggctgctgctgggg
gccgtgaccgtggggctgctggcccagagcgtcctggcgggtgtgaagaaattggacatg
ccttgtggaggcagagactgcagcgggggctgccagtgctaccccgagaaaggagggcgg
ggccagccaggaccggtgggcccccaggggtacaccgggccccctgggctacaggggttc
ccaggactgcaaggccgcaaaggagacaagggcgaaaggggagctcccgggatcacaggc
ccgaagggagacgtgggaccaagaggtgtttcgggattccccggtgccgacggaattccc
ggccatcccgggcaaggcggacccagaggacctccagggtatgacggctgcaatgggacc
atgggcgattcaggctacgcaggaccccagggccccggcggcttcctcgggccccgcggg
ccccaaggaccgaaagggcagaaaggtgagccctacgctctgtcctcagaggaccgcgac
aaataccggggggaacctggagagcccggactggttggcttgcaggggcctcccggccgc
cctgggcccgtgggacagatgggtccggttggagccccaggaagaccgggaccacctgga
ccccctggacccaaaggacagccaggcaaccgaggacttggtttttatggagaaaaaggc
gaaaagggcgacatggggctgcagggacccggcgggattccaccggacaacggttacgtc
gagaagcccacaccggcgtacgagcttctcccagagcagtataagggtgaaaaaggaagc
gagggagaaccagggagaataggcgtctcctcgaagggagaagaaggcgtcatgggcttc
tcgggaccacggggtggccccggcttcgacggtgagaagggctcgccgggacagaaagga
agcagaggactggatgggtaccaaggccctgacggattgccaggacccaagggagaaatg
ggcgacccaggcccccccggcctcccagcctactccccgcatccttccgtggccaaaggt
gtcagaggtgagccgggatccccaggagcccccggggagccaggagcccgcggggagcca
ggagaccccggtctgccaggccggccgggcacgaccatcggagacgaagatgagaagaga
ggcttgccgggcgagatgggacccaaaggcttcacaggagaacggggtttccccgcgctg
taccccggccgcccgggaaccgatgggaagccagggctccgcggtccccccgggcgccca
ggaccgcccggcccagacggttttctgttcggccggaaaggagaaagaggaagtgggggc
ttccctggctcctccgggttcccaggggctcgtggacagaaaggatggaaaggtgacgcc
ggcgactgtaaatgtgcagaccagttcatcaggggtcctccagggctgccaggacccaag
ggctttgcaggtgccaacgggcagcctggcagtaaaggcagccaaggagaccccggcccg
cacggcaaccccgggttctccgggttcaagggagcccctggtaatgtcggtccccccggg
cccaaagggatgaagggagactccaggaccatcaccaccaaaggtgagcggggccagcca
ggtgtcccaggcgtgccagggctgaaaggtagcgacggcatcccaggaccacccgggctc
gatgggttccacgggctccctggcccgcccggcgatggcatcaaaggcccctcaggggac
agaggccaaccaggagcccccggcactaagggccttccaggggagaggggccccccagga
ctgggcctgccaggccccaaaggcgagcacggcttccccggcgatgctggattgcccgga
ccaccaggcttcccggggcctcccggcctccccggcgctccaggacagctcgattgtgac
tcgggtgtgaaaagacccatcggagcagacggacaggagcccatccagccaggttgtgtt
ggaggacccaagggatccccaggccagcccggtctccccggccccccaggtgccaaaggc
ctcagaggagttccaggattttcaggagccgacggagcgccagggctcaagggtctccca
ggagatccaggtcgagagggattcccaggacccccagggttcatgggaccccgcggctcc
aaaggtgcagtgggcccccctggcctggatggactccctggcgcctctggcctaccgggg
ccagttgggcccccaggggacaggggccttcctggagaagtgctgggggcccagcccggg
ccccggggagactctggactgcctggacgtcccggactgaagggccctcccggagagaga
ggctcgcctggcttcaggggaagccagggcatgccagggatgccgggccagaagggccag
ccgggctccccaggactctcgggccagccgggactgccagggcctccaggacagcacggc
ttcccaggagcgcctggtcgggaggggcccctggggcccccgggcgcccccggctttgaa
ggtctgcctggagacagaggggagccgggggacaccggcgtccctggccccgtgggcatg
aagggcggctctggggacagaggtgaccctgggcagcagggagagagaggctaccccgga
ctccccggatttaaaggagtgtctggaatgcctggtaccccaggactgaaaggggccagg
ggctcccccgggatggacggcttcgaaggcatgctcggcctcaagggcagacccgggctc
ccaggaatcaaaggagaggcagggtttttcggaattccggggctgaagggcctggctggt
gagccgggtgtgaaaggcagccgaggagaccctgggcccccaggaccaccccccatcatc
ctgccgggaatgaaagacatcaaaggagagaagggagatgaaggccccatgggactgaaa
ggatacctgggcctgaaaggccttcccggaatgccaggcatccctgggctgtcgggaatc
ccggggctgcccgggagacctggccacatcaaaggggtcaaaggagacactggagtcccc
ggcgtgcccggctccccggggttccctggcgtgcccggctcccccggagtcatggggttc
caaggcttcacgggcagtaggggtgacaagggtgcccccgggagagcaggcttcttcggc
gaggtcggccccaccggtgacttcggtgacatcggagacacgatagatctgcccgggagc
ccaggcctgaagggggagcggggcaccaccggaataccaggtcaaaagggatttttcggc
gagaggggcactgagggtgatgtcggctttccagggatcaccggcctggccggagtccag
ggaccccctggattccaagggcaaaaaggctttccaggactcacagggctccaggggcct
cagggagatccgggacgggctggagcacccggcatcaaaggagactctggctggccaggg
aacccaggcttaccaggtctgcccggcctccgaggcatcagcggattgcacggtttgcca
ggcagcaaaggcttcccgggatccccaggtgcagacgtccacggggaccccggattccca
ggccctgccggggacaagggtgacccaggggaggccaacacccttccaggccccacggga
gccccgggacagaagggcgagcgtggagctccaggggagcgaggcccaatcgggagtcct
ggccttcagggctttccaggcatcacccctccctccaacatctctgggtcacctggggac
atcggcgcgcccggcatattcggcctggaaggttatcgagggcccccggggccgcctggg
cctgcagctcttcccggaagcaaaggtgatgaggggagtcctggaacccccggaagcccc
gggatcaaaggatggatcggcgaccccgggccccagggccggcctggcgtgttcgggctc
ccaggagaaaaagggcccaaaggggagccaggattcatgggcaacataggccccaccggg
agcccgggcgaccgaggccccaggggacccaaaggagaccgaggactcccaggtgcccct
ggtgccgtgggggctccaggcatcgcaggaatcccccagaggatcgcgatcgagcggggc
ccagtgggtccacagggcaggagaggccccccaggggctcagggggagatggggccgcag
ggcccccccggagaaccaggtttccgcggggcgcagggcaaggccgggccccagggacga
ggcggtgtgtcggccattcccggattccgtggagaccaggggcccgtggggctgcaggga
ccggtgggctttgaaggggagccgggccgccccggaagccccggcctgcccggcatgccc
ggccgaagcatcagcatcgggtacctcctggtgaagcacagccagaccgacaaggagccc
atgtgccccgtgggcatgaacaagctctggagcgggtacagcctgctctacttcgagggc
caggagaaggcccacaaccaggacctggggctggcgggctcctgcctggcgcgattcagc
accatgccgttcctgtactgcaaccccggcgacatctgctactacgccagccgtaacgac
aagtcctactggctgtccaccaccgccccgctgcccatgatgcccgtggccgaggaggac
atccggccctacatcagccgctgctccgtgtgcgaggccccggccgttgccatcgcagtc
cacagccaagatgtctccatcccccactgcccggccgggtggcgcagcttgtggatcgga
tactccttcctcatgcacacggccgccggtgacgaaggaggcggccagtcgctggtgtcg
ccgggcagctgcctggaggacttccgcgccacgccgttcatcgagtgcaacggggcccgc
ggcacgtgccactactacgccaacaaatacagcttctggctgaccaccatcccggagcag
gacttccagggcgcgccctctgccgacacgctcaaggccggtctcatccgcacgcacatc
agccgctgccaagtgtgcctgaagaacctgtga
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integrated database retrieval system