Oryx dammah (scimitar-horned oryx): 120883398
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Entry
120883398 CDS
T07255
Symbol
UPF3A
Name
(RefSeq) regulator of nonsense transcripts 3A
KO
K14328
regulator of nonsense transcripts 3
Organism
oda
Oryx dammah (scimitar-horned oryx)
Pathway
oda03013
Nucleocytoplasmic transport
oda03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
oda00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
120883398 (UPF3A)
03015 mRNA surveillance pathway
120883398 (UPF3A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oda03019
]
120883398 (UPF3A)
Messenger RNA biogenesis [BR:
oda03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
120883398 (UPF3A)
mRNA cycle factors
P-body specific factors
120883398 (UPF3A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Smg4_UPF3
Motif
Other DBs
NCBI-GeneID:
120883398
NCBI-ProteinID:
XP_040123440
LinkDB
All DBs
Position
Unknown
AA seq
513 aa
AA seq
DB search
MRSEDGAGGPGVAVTTRGPSGREKPSSAESQFRRESPRREAEAPLAAASGCGSGAGKPRE
EKRTVLSKVVIRRLPPSLTKEQLEQQLHPLPAHDYFEFFTADVSLYPHLYSRAYINFRNP
DDILLFRDRFDGYIFIDSKGLEYPAVVEFAPFQKIAKKKLKKKDAKTGSIDDDPEYKKFL
ETYCVEEEKASVSPETLLGDIEAKTRELIARRTTPLLEYIKNRKLEKQRIREEKREERRR
RELEKKRLREEEKRRRREEEKCRRKAAEKQKKTAEKEVRVKLLKKPEKGEEPSTEKPKER
VEETEPGDGRWESCPREVVLKPKPSEGSLEELRERSQNDSDKEQRDKERRSREKELEAQR
CHLDDRKHRARYELEECSGRNGEELAHGKGSAADRGRRGSQERGCPVEAAGRPGREKSED
RPAPRKERTGSKDWPGLQLYQPRARIRARDCDGRHPEEGRDGRRGEVEDSTVALAEKSEE
VVWGDVHVGDVGGGSPPQHSVDSRGRSFRKCIN
NT seq
1542 nt
NT seq
+upstream
nt +downstream
nt
atgcgctcggaggatggagccgggggccccggtgtggccgttactacgcggggtccgagc
gggagggagaaaccatcgtccgcagaaagccagttccgccgggagtctccgcggcgcgag
gccgaagcgccgctggccgccgcctccggctgtgggagcggcgcaggcaaacctcgcgag
gaaaagaggacggtcctgagcaaagtggtcatccggcggcttccccccagcctcaccaag
gagcagctggaacagcagctgcaccctctgcctgcacacgattacttcgagttctttact
gctgatgtcagtctttatcctcatctctactcaagagcatacattaactttagaaatcca
gatgacatccttctttttagagatcgttttgatggatatatcttcattgatagtaaaggg
ctggagtaccctgcagtggtagaattcgctccattccagaagatcgccaaaaagaagctg
aagaagaaagatgccaaaacgggaagcattgacgacgacccagagtacaagaaattttta
gaaacttactgtgtggaggaggagaaagctagtgtcagtcctgaaactcttctgggagac
atagaggcaaagacacgagaacttattgctagaagaaccacacctctcttggaatatatt
aaaaacagaaaattagagaagcagcgaattcgagaagaaaaacgagaggagcggaggagg
agggagctggaaaagaagcgcctacgggaagaagagaagcggaggcggcgggaggaggaa
aagtgcaggaggaaagcagcagaaaagcagaagaaaacggcagagaaggaagtaagggtg
aagcttctcaaaaaaccagaaaagggagaggagccgagcactgagaaaccgaaagaaaga
gtggaggagactgagcctggagatgggaggtgggagtcctgtcctcgtgaggtggtcctg
aagcccaagccctcagagggctcgctggaggagctccgggagaggtcacagaatgacagt
gataaagagcaaagggataaggagagaagatcccgagaaaaagaacttgaagcacagcga
tgccacttggatgacaggaaacacagagcccgctacgagctggaagaatgttcgggaaga
aacggagaagagctggcgcacgggaaggggtcggccgcagacagagggaggagagggagc
caggagaggggctgccctgtggaagcggcagggaggccgggcagggagaagagtgaagac
cggccggcacccagaaaggagcgcacgggaagcaaggactggccaggcttgcagctgtac
cagcccagagctcgcatccgagcccgtgactgtgatggaagacaccctgaggagggccgc
gacgggaggaggggtgaggtggaagactcaacggtggctttagctgagaagagcgaagag
gtggtgtggggcgacgtgcatgttggtgacgtgggtgggggctccccacctcaacactct
gtggattcgagagggcgttccttccggaagtgtataaattaa
DBGET
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