Orrella daihaiensis: DHf2319_01125
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Entry
DHf2319_01125 CDS
T08894
Symbol
rsmB
Name
(GenBank) 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB
KO
K03500
16S rRNA (cytosine967-C5)-methyltransferase [EC:
2.1.1.176
]
Organism
odh
Orrella daihaiensis
Brite
KEGG Orthology (KO) [BR:
odh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
odh03009
]
DHf2319_01125 (rsmB)
Enzymes [BR:
odh01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.176 16S rRNA (cytosine967-C5)-methyltransferase
DHf2319_01125 (rsmB)
Ribosome biogenesis [BR:
odh03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
DHf2319_01125 (rsmB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Methyltr_RsmB-F
RsmF-B_ferredox
FtsJ
Methyltransf_31
PCMT
NusB
UPF0020
Methyltransf_11
Methyltransf_5
Motif
Other DBs
NCBI-ProteinID:
UOD50573
UniProt:
A0ABY4AKG5
LinkDB
All DBs
Position
complement(245316..246671)
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AA seq
451 aa
AA seq
DB search
MNSPNPALSEILFASSRCLAAVQTGHSLTEALAKLPSKMRPAAQAVAWYAMRHWGLAQAW
RDFALSRQPKPWLSCHVALTLLLLDAAMIEHGHAGEDSLQSPLDQYCPRYAPHTLVDQAV
RAAELAKQGKAGCGLVNAVLRRFQRERPAFLAAVKHNPVARWNHPAWWIKKLKANYPKDW
QTILDATLTPPKLVLRINRRLTSTEQVLVAFHVAGYRCRSLGQDSIMLEDSAVVSALPGF
TQGHWSVQDQSAQLAAPLLGLRDGLRVLDACAAPGGKTAHLLELADVKLTALDHDSSRLA
RVKENLSRLQLMTGDVTLKVADARALEQWWDRQPFDAILADVPCTASGVVRRHPDIAWLR
RESDVSQTTMLQREILDALWQTLAPGGRLLLVTCSVFPEEGEGQAQAMLTRHADAIRLPA
PGQILPEPATDSAPGHDGFFYAAFERKALDR
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
atgaactcgcccaatccagccctttctgaaattttgtttgcaagtagccgctgtctggca
gctgtgcaaacggggcattcattaaccgaggccttggctaaattgcccagcaagatgcgt
ccggcagcacaagccgtggcttggtacgccatgcgtcactggggtctggcacaagcgtgg
cgagatttcgccttaagtcgccaacccaaaccttggcttagctgccatgtggcgttgaca
ttgttgctgctcgatgccgccatgattgagcatggccatgccggcgaagactctttacag
tcaccgctcgatcagtattgtccgcgatacgccccccatacactggtggaccaggccgtg
cgcgccgctgaattggccaagcaaggcaaagccggctgcggtctggtcaacgctgtttta
aggcggtttcaacgcgaacggccggcctttttagcagccgtcaaacacaatcctgtcgcg
cgctggaaccatccagcttggtggattaaaaaacttaaagccaattaccccaaagactgg
caaaccattcttgatgcaacgctcacgccgcccaaactggtgctgcgcatcaaccgcaga
cttacgagcaccgaacaagtgctcgtcgcatttcatgtcgcaggatatcgttgtcgatcc
ttgggccaagattcaatcatgcttgaagactcggctgttgtcagtgcgttgcccgggttc
acgcaaggtcactggtccgttcaggatcagtcagcgcagcttgctgcaccattacttggg
cttagagacggtctgcgagtgctcgatgcgtgcgcagccccgggcggcaaaactgcccac
ttgcttgaattagccgatgtcaaattgaccgcactggaccacgactcaagtcgcctggca
agagtgaaggagaatctatctcgccttcagttgatgacgggcgatgtgaccttaaaggtg
gccgatgccagagcactcgaacaatggtgggatcgtcagccatttgatgccattttggct
gatgtgccttgcacagccagtggcgtggtgcgccgccatcctgatatcgcatggcttagg
cgagagtccgatgtgtctcaaacaaccatgctgcaacgtgaaatacttgatgccctgtgg
caaactttggcgcccggtggtcggctgttgctagtaacatgttcggtgtttccagaagaa
ggtgagggccaagctcaagccatgctcactcgacacgccgatgctattcgcttgccagct
cctggccaaatcctgcctgagccagctactgactctgcgccggggcatgacggctttttc
tatgcagcgtttgaacgcaaggccttggacagatga
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