Orrella daihaiensis: DHf2319_01275
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Entry
DHf2319_01275 CDS
T08894
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
odh
Orrella daihaiensis
Brite
KEGG Orthology (KO) [BR:
odh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
odh03021
]
DHf2319_01275 (rpoH)
Transcription machinery [BR:
odh03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
DHf2319_01275 (rpoH)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r1_2
HTH_PafC
GntR
Motif
Other DBs
NCBI-ProteinID:
UOD50601
LinkDB
All DBs
Position
complement(275295..276173)
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AA seq
292 aa
AA seq
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MTRELTVSPQALSMAIANPGALGSIEAYISAVNHMPVLSAEQEQAYALDLRDKNDLDAAR
HLILSHLRLVVSIARQYLGYGLAHADLIQEGNIGLMKAVKRFDPDRGVRLVSFAVHWIKA
EIHEFIIRNWRLVKVATTKAQRKLFFNLRRMRPDGTTLDSQMVDDIATELSVKPEDVREM
EVRMTGREFSLQAPAGDDDQFSPIDYLSDDGEYDPTEVLARQDHDRLQTTGLSQALEMLD
ERSRRIVTARWLGDDGGPTLHELAEEFGVSAERIRQIEAAALKKMRGALQAA
NT seq
879 nt
NT seq
+upstream
nt +downstream
nt
atgactagagaattgaccgtatcacctcaggctctatccatggcgatcgccaacccaggc
gcgttaggatcgattgaggcttacatcagtgcagtcaaccacatgcccgtgcttagcgcc
gagcaggagcaggcgtacgcgcttgacttgcgcgacaagaacgatctcgatgcggcgcgg
catttgattttgtcgcacttgcgactcgttgtctcaatcgctcgtcagtacttgggctac
ggcctggcacatgctgatttgatccaggaaggcaacattggactgatgaaagcagtcaaa
cggtttgacccggaccgcggcgtgcgtctggtgtcctttgccgtgcactggatcaaagcc
gaaatccacgaattcattatccgtaattggcgcttggtcaaggtggctaccaccaaggct
cagcgcaaattgttcttcaatcttcgccgcatgcgccctgatggtacgacgctggattcg
cagatggttgatgatattgccaccgagctaagcgtcaaacccgaagacgtgcgcgagatg
gaagtgcgcatgaccgggcgcgagttttctttgcaagcaccagccggtgacgatgatcaa
ttcagcccgatagactatctgtcagacgacggcgaatacgatccaaccgaggtattggca
cggcaagaccatgaccgcctgcaaaccacgggactgtcgcaagcgctcgagatgctcgat
gagcgctcacgccgaatcgtcacggcacgctggctaggcgacgatggcggaccaaccttg
cacgaacttgccgaagagtttggcgtatcggccgagcgcattcgccagatcgaagccgcc
gcactgaagaagatgcgcggtgctttgcaagctgcctga
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