Orrella daihaiensis: DHf2319_02950
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Entry
DHf2319_02950 CDS
T08894
Name
(GenBank) 3'-5' exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
odh
Orrella daihaiensis
Pathway
odh03030
DNA replication
odh03430
Mismatch repair
odh03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
odh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
DHf2319_02950
03430 Mismatch repair
DHf2319_02950
03440 Homologous recombination
DHf2319_02950
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
odh03032
]
DHf2319_02950
03400 DNA repair and recombination proteins [BR:
odh03400
]
DHf2319_02950
Enzymes [BR:
odh01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
DHf2319_02950
DNA replication proteins [BR:
odh03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
DHf2319_02950
DNA repair and recombination proteins [BR:
odh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
DHf2319_02950
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
Motif
Other DBs
NCBI-ProteinID:
UOD50898
UniProt:
A0ABY4ALS5
LinkDB
All DBs
Position
616372..617043
Genome browser
AA seq
223 aa
AA seq
DB search
MFDKLFGRSPTPETQPHADAYELVGTCRWVVVDTETTGLNIRHDRIISIAAVAVHLEPDL
SDGHIPLADTFEAVIHQAHPKAKKDNILIHHIGVDAQGKGHAEADVLGWFVNWVGDSPIF
AYHAPFDKAMIANALKHVGMPEMSNPWVDVQPIANWVTRQSHALGLDECVEHFGLESIAR
HSAASDTFVTAELLLKLLRHTQSVATDFKQLQQLASQNATRIG
NT seq
672 nt
NT seq
+upstream
nt +downstream
nt
atgttcgataaattatttggccgcagcccaacacccgaaacacagccccatgctgatgcc
tacgagcttgtaggcacttgccgctgggtggtggttgataccgagaccacgggtttgaac
attcgccacgaccgcatcatttccattgctgcggtggcggtgcatctggagccagactta
agcgatggtcacataccgctggccgatacattcgaagcggtgatacaccaagcgcacccc
aaagcaaaaaaagacaatatcttgattcatcatattggtgtggatgcgcagggcaagggc
catgccgaggctgatgtgcttggctggtttgtgaactgggtcggtgattcaccgatcttc
gcctaccacgcgccgtttgacaaagccatgattgccaatgccttaaagcacgtcggcatg
cctgagatgagcaatccctgggtggatgttcaaccgattgccaattgggtgacacgtcag
tcccacgcacttggtctggacgaatgcgttgagcactttgggcttgaaagcatcgcgcgc
cattcggctgcgtcggacacgtttgtgactgctgagttgttgttaaagcttttgcgccac
acgcaatcggtggcaacagactttaagcaactgcagcaacttgcctcacaaaacgccacc
cggattggttag
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