Orrella daihaiensis: DHf2319_04200
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Entry
DHf2319_04200 CDS
T08894
Symbol
dacB
Name
(GenBank) D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase
KO
K07259
serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:
3.4.16.4
3.4.21.-]
Organism
odh
Orrella daihaiensis
Pathway
odh00550
Peptidoglycan biosynthesis
odh01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
odh00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
DHf2319_04200 (dacB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
odh01002
]
DHf2319_04200 (dacB)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
odh01011
]
DHf2319_04200 (dacB)
Enzymes [BR:
odh01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
DHf2319_04200 (dacB)
Peptidases and inhibitors [BR:
odh01002
]
Serine peptidases
Family S13: D-Ala-D-Ala peptidase C family
DHf2319_04200 (dacB)
Peptidoglycan biosynthesis and degradation proteins [BR:
odh01011
]
Peptidoglycan biosynthesis and degradation
DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
DHf2319_04200 (dacB)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Peptidase_S13
Beta-lactamase2
Motif
Other DBs
NCBI-ProteinID:
UOD51110
UniProt:
A0ABY4ANY4
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All DBs
Position
864868..866298
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AA seq
476 aa
AA seq
DB search
MLHRKFAMMLVAWAAALFGGAAGAADKPMPPEVARAWSATGLPSSALSMVIEEVQGDRLA
AVNGAEFKNPASVMKLVTTWAALSELGPDYVWQTAFLIDNNATVSDDGVLSGPVYLRPTG
DPVIMLEDLWRLMRELRLRGIRQINDIVVDRSPFGEVAIDPAEFDGKGDRPYNASPDVFM
VGFGAVRLVFTPDLQAKRWRAFVDPPIPGIEIDSDIKYQDGSCRRGPRVSVQTVNGADDV
RFRVSGEAHGACGEFDFYRLAFDQQAFAARTLKTMWRELGGTMTGTVKDGSIPADAVPLA
AHQSPPLAEVIRLVNKRSNNVMTRVLLLTLGAQAGQRPATVAGSAEVVKRILTAQGIELG
QTVIENGSGLSRNARISADVMADMLQHAWRSPAMPEYVSSMAILGVDGTLKRRLRGDDAR
GYANMKTGALKDARAIAGYVLSKSGKRYVFVSLVNHPQAYKARDFENAVMAWLNDR
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
atgttgcaccgtaagtttgccatgatgcttgttgcttgggcagcagcgctgtttggtggc
gcggcaggggccgctgataagccaatgccgcccgaggtcgccagagcctggtcagcaacg
ggtttgccatcatctgctttgtcgatggtgatcgaagaagtgcagggtgatcgtctggcg
gcggtcaatggcgctgaatttaaaaatccggcctcagtgatgaagctggtgaccacctgg
gctgcattaagtgagcttgggcccgactatgtatggcaaaccgcatttttaatcgataac
aatgcgacggttagtgacgatggggtgctctcgggcccggtctacctccggccaaccggc
gaccccgtcattatgctggaagacttgtggcgtttgatgcgagagttacgcttgcgaggc
attcggcaaatcaacgacattgtggtggatcgatcgccgtttggtgaagtggccattgat
cctgccgagttcgacggcaagggcgataggccgtataacgcgagtccggatgtttttatg
gtggggttcggtgcggtgcggctggtttttacgccagacttgcaggctaaacgctggcga
gcctttgttgacccacccattccgggtatcgaaattgatagtgacatcaagtaccaagat
ggcagctgtcgtcgaggccctcgggtgagtgttcaaaccgtcaatggggctgacgatgtc
aggtttcgtgtcagcggtgaagcccatggcgcttgtggtgaatttgatttctatcgactg
gcattcgatcagcaggcttttgcggcgcggactctcaaaaccatgtggcgtgagcttggc
ggcacgatgacaggcacggttaaagacggttcgattcctgccgatgccgtgccattggcc
gcacatcagtccccaccgttggctgaggttatccgtctcgttaacaagcgtagcaataac
gtcatgacacgcgtgttgttattgacgctcggggcgcaggctggacagcggccggcaacc
gtggcgggcagtgctgaggtggtcaagcgaatattgacggcacagggcatcgagcttggc
caaacggtgattgagaacgggtctggtttgtctcgcaatgcgcggatcagtgccgacgtg
atggccgatatgttgcagcatgcatggcgatcgcctgccatgccggagtatgtgtcctcg
atggcaattctgggggttgatggaacgctcaagcgtcgcttgcgcggtgatgatgcccgc
ggctatgcgaatatgaaaaccggtgcgttaaaagatgcgagagcgatcgcgggctatgtg
ttgtccaaatcaggcaagcgctatgtttttgtgagcctggttaaccatccgcaggcctat
aaggcgcgagattttgagaatgcggtcatggcttggttaaacgaccgttga
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