Orrella daihaiensis: DHf2319_05655
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Entry
DHf2319_05655 CDS
T08894
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
odh
Orrella daihaiensis
Pathway
odh03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
odh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
DHf2319_05655 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
odh03019
]
DHf2319_05655 (recQ)
03400 DNA repair and recombination proteins [BR:
odh03400
]
DHf2319_05655 (recQ)
Enzymes [BR:
odh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
DHf2319_05655 (recQ)
Messenger RNA biogenesis [BR:
odh03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
DHf2319_05655 (recQ)
DNA repair and recombination proteins [BR:
odh03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
DHf2319_05655 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
Helicase_C
RecQ_Zn_bind
ResIII
Motif
Other DBs
NCBI-ProteinID:
UOD51577
LinkDB
All DBs
Position
1172899..1174479
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AA seq
526 aa
AA seq
DB search
MVSSARSAPEKVLGRVFGHQAFRMQQAQVIEHVMAGGDALVLMPTGGGKSLCYQVPALLL
DGTAVVVSPLIALMHDQVQALRARGVRAASLNSTLTHEQSKGVEQSLSAGELDLLYVAPE
RLVRPRLMQLLKNIKVSLLAIDEAHCVSQWGHDFRPEYLALESLADHWPGVPRLALTATA
TPATRKDILDRLRLPHATIFASGFDRPNIFYEVVDKADVRAQLLAFINTRYRGRSGIVYT
ASRARAQALASWLNRHGINALPYHAGLDREQRTRHQARFVSEPDLVMVATIAFGMGIDKP
DVRFVAHVDMPRSLEHYYQETGRVGRDGQPATAWMAYGLSDVAQRYTLARETEASASQAQ
RVMASFDQMLQFAESLTCRRVQLLAHFGQDSHACGHCDNCQMLQRDQPLWDATEAAQMVL
STVYRLWRERGQRYGSGHLIDIVRGKRTTRVVAQGHDSLSVFGVGAQWSVLTWRNVVRRL
MAEQMLVTDDEGYGTLAMTPASVPVFKGERRLWMRRDSISQMDRPD
NT seq
1581 nt
NT seq
+upstream
nt +downstream
nt
atggtgtctagcgctcgcagcgcccctgaaaaggtacttgggcgtgtgtttggccatcag
gcatttcgcatgcagcaagctcaagtgatcgagcacgtcatggccggtggcgatgcgctg
gtgttaatgcccaccggtggtggcaaatcgctttgctaccaagtaccagcgctgctgttg
gatggcaccgctgtggtcgtttctcctttgattgccttgatgcatgatcaagtccaagcc
ttgcgcgcacgtggcgtgcgcgcggcaagcttgaattcgaccttgactcacgagcaaagc
aaaggggtagagcagtctttgtctgctggcgagttggatctcttgtacgtagcgccagaa
agactggtgaggccacgattgatgcaattactaaaaaacatcaaggtcagtctccttgcg
attgatgaggcacattgtgtatcgcaatgggggcatgatttccggccagagtacctggcg
cttgaatctctggcggatcattggcctggcgtgcctagactggcgttaacagccacggcg
acgccggccacacgcaaagatattctcgatcgattgcgtctgccgcacgcgaccatcttt
gccagtggctttgacaggccgaacattttttatgaggttgttgacaaggccgatgtgcgc
gcgcaactgcttgcgttcatcaacacacgttatcgagggcgatctggcattgtatatacc
gcctcgcgcgcgcgcgcccaggcacttgcttcatggcttaatcgccatggcattaatgct
ttgccatatcacgctgggcttgaccgcgagcaacggaccaggcatcaggccagatttgtc
agcgagcccgatttggtgatggtagcgacgattgcgtttggcatgggcatcgacaagcct
gatgtgcgatttgtcgcgcatgtggatatgcccagatcgcttgagcattactaccaggaa
actggccgggtaggacgcgatggccagcctgcgaccgcatggatggcttacggtctgtct
gatgtggcgcaacgctacaccttggcccgcgagaccgaagcaagtgccagccaggcgcaa
cgtgtgatggcctcgtttgatcagatgctgcagtttgctgagtcattgacatgtcgtcgg
gtgcagttgcttgcgcactttgggcaagatagccatgcgtgcgggcattgtgacaactgc
caaatgctgcaaagggatcaaccactctgggatgcaaccgaagcagcccagatggtcttg
tccacggtctatcggctctggcgtgagcgcggccagcgctatggctcaggccacctgatt
gatatcgtgcgaggcaaacgcacgaccagagtggttgcgcaagggcatgactcgctgtct
gtgttcggtgtaggtgcgcagtggtcagtgctgacctggcgcaatgtggtcagaaggttg
atggctgagcagatgctcgtgaccgatgatgagggttacggcacgttggcgatgacacct
gcgagcgtgccagtgtttaagggtgagcgcaggctttggatgcggcgggactcgataagt
caaatggatcgacccgattga
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