Orrella daihaiensis: DHf2319_07060
Help
Entry
DHf2319_07060 CDS
T08894
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
odh
Orrella daihaiensis
Pathway
odh03420
Nucleotide excision repair
odh03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
odh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
DHf2319_07060
03430 Mismatch repair
DHf2319_07060
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
odh03400
]
DHf2319_07060
Enzymes [BR:
odh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
DHf2319_07060
DNA repair and recombination proteins [BR:
odh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
DHf2319_07060
MMR (mismatch excision repair)
Other MMR factors
DHf2319_07060
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_12
AAA_30
PcrA_UvrD_tudor
Viral_helicase1
PDZ_3
LPG_synthase_C
AAA_11
ApoLp-III
Motif
Other DBs
NCBI-ProteinID:
UOD49262
LinkDB
All DBs
Position
1493066..1495294
Genome browser
AA seq
742 aa
AA seq
DB search
MTVEQLNDPQRRAVTLTEGHALVLAGAGSGKTKVLTTRIAWLIQNRLASPLSILAVTFTN
KASKEMQSRVGAMLPIDTRGMWIGTFHGLCHRMLRAHSRDAGLPQTFQILDTTDQLALIK
RLLKANGIDEDKYPARDAQRFINRCKEEGLRAPAVQVDDPFSRRMRDIYELYEAQCQREG
VVDFPELLLRALELLQNHEPVRTHYQQRFRHILVDEFQDTNPLQYAWLQLLAGDGTCLFA
VGDDDQSIYAFRGANVGNMADFERDYARGNVIRLEQNYRSHGHILDAANALIANNTGRLG
KTLWTDAGQGELVRLCEQPSDHAEAQWVLDEIRALHDDGLSRQDMAILYRSNAQSRVLEH
ALFSAGVPYRVYGGLRFFERQEIKHALAYLRLVSRIDEDSAFLRVVNFPARGIGARSIET
LTDQANAYQTSLAQAVARVSGKAGSSLAQFVSMIQTLRDQVLTLSLSEAVEQVIDTSGLR
EHYRSQRDGAERLENLDELVNAAKVFELEEDLAGLPCGERRVRAQDELSDPMTGLEAFLS
HAALESGDTQAQAGQDAVQLMTIHAAKGLEFDAVFLTGVEDGLFPHENSMYEPGGLEEER
RLMYVAMTRAKKRLYVSLSQSRMLHGQTRYCLPSRFIEEIPEDHVKRLSAKPAIDDWIGS
AVATRMGGGYRASSPKSAVASGIEVGGQTFRVGQGVRHPRFGEGTILGLSGLGLDAQAQI
HFLDVGTKTLALGVAKLEIIAR
NT seq
2229 nt
NT seq
+upstream
nt +downstream
nt
atgacagtcgagcaactgaatgaccctcagcgtcgcgcggttacgctgactgagggtcat
gcgctcgttttagcgggcgctggtagcggtaaaaccaaagtcctcactactcggatcgcc
tggctgattcaaaatcgtctggcaagtccgctgtcgattttggcagtaactttcacaaac
aaagcctccaaggaaatgcagtcgcgtgtcggcgccatgttgccgattgatacgcgtggc
atgtggatcggtacatttcacgggctttgccatcggatgttgcgtgcgcacagccgtgat
gcaggtttgccgcagacatttcagattttggatacgactgatcaacttgccctgatcaaa
cgccttttgaaggctaacggtatcgatgaggacaagtatccggcacgtgacgcgcagcgt
tttattaaccgttgtaaagaagagggtctgcgtgcgcctgcggttcaggttgatgatccg
tttagtcgacgtatgcgcgatatttatgagctctatgaagcacagtgtcagcgcgaaggt
gtcgtcgattttccggagttgttattgcgcgcgctcgaactgttacaaaatcacgagcca
gtgcgtacgcactatcagcagcgatttcgtcacatcttggtggatgagttccaggacacc
aatccactgcaatatgcctggctgcaactcttagcaggcgatggtacctgtttgttcgcc
gtcggtgatgatgaccagtcaatctacgctttccggggagccaacgttggaaacatggct
gactttgagcgtgactatgcgcgcggcaacgtcattcgcctggaacaaaattatcgctct
cacgggcatattctggacgccgcaaacgccttgattgcgaataacacgggccgcttaggc
aagacgctttggaccgatgctggtcaaggtgagctggtgcgcctgtgcgagcaaccctca
gaccatgcggaggcgcaatgggtgttggatgagataagggccttgcatgacgacggcctg
agccgccaggacatggcgattctttatcgcagcaatgcgcagtccagagtgcttgagcat
gcactgttttcggctggcgtgccgtatcgtgtctacggtgggttgcgattcttcgagcgg
caggaaatcaaacacgcactggcttatttgcgtcttgtgagtcgtatcgatgaagacagt
gcatttttgcgggtggtgaatttcccagcgcgaggcatcggcgcgcgatcgattgagacg
ttaaccgatcaggccaatgcttatcagaccagcttggctcaggctgttgccagggtgtct
ggcaaagcgggcagttccctggcgcagtttgtcagcatgattcaaaccttgagagatcaa
gtgctcacattgtctctgtctgaagctgttgaacaggtgattgacaccagtggattgcgt
gagcactacagaagtcagcgtgatggtgcagagcgcctggaaaacctggatgagctagtt
aatgctgccaaggtgtttgaattggaagaagacttggccggattgccctgcggagaacgg
cgtgttcgtgcacaggatgaactcagcgatccgatgactgggcttgaagcgtttttatcg
catgccgcactggagtcaggtgatacccaagcacaggctggtcaggatgctgtgcaattg
atgacaatccatgcggctaaaggcctggagtttgatgccgtattcttgactggtgtcgag
gatggtctgttccctcatgagaacagtatgtacgagccgggtggtctggaagaagagcgg
cggctgatgtacgttgccatgactcgtgccaaaaagcgtctctatgtcagtttgtcgcaa
agccggatgttgcacggccagacgcgttactgtttgccatcgcgctttatcgaagagatc
cctgaagatcatgtcaaacgattaagtgccaaacctgcgattgacgactggattggctcg
gcggtcgctacgcgtatgggtggcggttatcgcgcatctagtcccaaatctgctgttgca
agcggtattgaagtgggtgggcagacctttagagttgggcaaggtgttcgacatccccgc
ttcggggagggcacgattttagggctttctgggctaggtctggatgcacaggcgcagatc
catttcctggatgtaggcaccaagaccttggcacttggagtggctaagcttgagatcatt
gcccgatag
DBGET
integrated database retrieval system
