Orrella daihaiensis: DHf2319_08540
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Entry
DHf2319_08540 CDS
T08894
Name
(GenBank) ABC transporter substrate-binding protein
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
odh
Orrella daihaiensis
Pathway
odh02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
odh00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
DHf2319_08540
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
odh02000
]
DHf2319_08540
Transporters [BR:
odh02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
DHf2319_08540
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
Motif
Other DBs
NCBI-ProteinID:
UOD49524
LinkDB
All DBs
Position
complement(1793962..1795548)
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AA seq
528 aa
AA seq
DB search
MSTPLRSVLSASVISAMLLGATVASAESLTIGISSEPSSIDPHYHNLGPNNSLVRQVYEP
LVSQGPSQELRPGLAASWKPVDDTTWEFKLREGAKFANGDTVTVDDVIATMNRVPNVPRS
PASFTQFINGMTFEKVDDKTLRVKTKTPAPLVPTMLSVVAVVAKECAENMSTEDFNAGKC
LGGSGPYQFKEFKPGDRTVMTLNPNYDGPKPKWDEVTFRYLTSGPTRVAALLSGDVDVID
NVPPTDIAKLKADSKINVSDTLSNRVIYLHMDQFRENSPFITAKDGSPIKNPLMDPRVRQ
ALSMAINRQAIVDRIMDGAAEPAEQMLAKNFFGTSQKLQPTKYDLEGAKALLAQAGYPDG
FKMKMHGPAGRYTNDTQILEAIAQMFTRLGLVVEIETMPPSNFFSRASTGANGQPEFSMI
LAGWGSGTGETSSSLRSLLATFDKSKGFGAANRGRHSNPELDAKIVQALATVDDKKRAQI
LAEASEIAFNNVGIIPIHFQRNVWASEGDITVEARADEYTLPSGINKK
NT seq
1587 nt
NT seq
+upstream
nt +downstream
nt
atgtcaacgcctctgcgtagtgttttgtcggcttcggtcatctctgccatgttgctcgga
gcaacagtggctagtgctgagtctttgaccattggtatttcgtctgaaccgagctcaatt
gatccgcactatcacaacctaggtccaaataactcgttagttcgtcaagtttatgagccg
ctagtgagtcaaggcccaagccaggaattgcgtccaggtcttgctgcgagttggaagccg
gtggatgacacgacttgggagttcaaactgcgcgagggggcaaagtttgccaatggtgac
actgtcactgtggatgatgtcatcgcaacgatgaatcgcgtgcccaatgtacccaggtca
cctgcgagctttacgcagttcatcaatggcatgacctttgaaaaggtcgatgacaaaacg
ctaagggtcaaaacaaaaacaccagcgccgcttgtgcctacgatgttatctgttgtggca
gttgtcgctaaagaatgcgctgaaaacatgtcaactgaagatttcaacgctggcaagtgc
ctaggtggtagtggcccctaccagttcaaagagttcaagccaggtgaccgtactgtcatg
acgttgaatccaaattacgacggtccaaagcccaagtgggacgaagtgaccttccgttat
ttgacatccggcccgacacgggtggctgcattgctgtctggcgatgtggatgtgattgac
aatgttccaccgaccgacattgccaaattgaaggcggattccaagatcaatgtaagcgac
acgctttcgaaccgtgtcatctatttgcacatggatcaattccgggaaaacagcccattt
attacagccaaggacgggtcgcccatcaaaaatcctttgatggatcctcgcgtgcgccaa
gcattgtctatggcgattaatcgacaggccatcgtcgaccggattatggatggtgcggct
gaacccgccgagcagatgctagcaaaaaatttcttcggtacttcacaaaagctgcagccg
actaaatatgaccttgagggtgcgaaagctttgctagcacaagctggctacccagacggc
tttaagatgaagatgcatggtccagcgggtcgttacaccaatgacacccagattctggag
gcgatcgctcagatgttcacgcgtctggggttagtcgttgaaatcgaaaccatgccgccg
agcaacttcttttctcgtgcatctaccggtgcaaatggtcagcctgagttctcgatgatt
ttggcgggttggggctcaggtactggcgaaacatcgagctcgctgcgctccttgttggca
acctttgataaatcgaagggttttggagctgccaatcgtggtcggcactctaacccggag
cttgatgccaagatcgttcaggcattagccacagtagatgataagaagcgtgcgcaaatt
ctggctgaagcttctgaaatcgccttcaataacgtcggtatcattccaattcatttccag
cgcaacgtgtgggcatcggagggtgacatcacagtggaagctcgcgcagatgagtacacc
ttgccatctgggatcaataagaaataa
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