Orrella daihaiensis: DHf2319_09365
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Entry
DHf2319_09365 CDS
T08894
Name
(GenBank) ABC transporter substrate-binding protein
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
odh
Orrella daihaiensis
Pathway
odh02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
odh00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
DHf2319_09365
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
odh02000
]
DHf2319_09365
Transporters [BR:
odh02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
DHf2319_09365
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
Tas3_C-hel
DUF4381
Motif
Other DBs
NCBI-ProteinID:
UOD49669
LinkDB
All DBs
Position
complement(1964335..1966575)
Genome browser
AA seq
746 aa
AA seq
DB search
MTLGCLYRSVLAAGLALLLAGCDLVTDPINSPYQAGAEADNTLYTAFTQRSPRYLDPAKS
YSSDETPYTYNIYEPLYGYHYLKRPYELIARAAAQVAQPILLDANGNVLPDTVAPDLVHE
SIHEIKLRPGILFQPHPAFAKKPDGQYTYYPLAPGALEDRYAITDFAQTGTRELTAHDYV
YAFRRLASPRVASPIYSTLAQHVVGFAEYGEQLKTEDAKLREAGDGNNLPWLDLREYAFD
GVQAVDDHSLRIRVKGSYPQFKYWLSMTFTAPVPWEADRFYSQPGMATNSLSLNTWPVGT
GPFMMVESLQNRRHVLARNPNFRGEPYPCEGEPGDREAGLLEDCGKMTPFVDRMVFSIEK
ESIPLQGKFMQGYYDLPESNRGDIGVAMLVAAGDSSEKAALYAERGIQLPSTVEASIFYL
GFNWLDPVVGKGDTPEQQEKNRKLRQALTIAFNWEEFIAIFRQGQAQPAYGPVPPGILGY
QEAPEGINRSIYDVVDGKARRKSLDYARQLLAQAGYPNGRDEVTGQPLVLYFDSAAGANA
SSPTLDWMRRQVGKLGIQLDIRATDYNRFQEKMSRGVAQMFMWGWIADYPDAENFLFLLY
GKQVKAGKGGENAANYSNPEYDALFEKMRDLPDGPEKAAIIDQMIKIVQHDAPWMFGFFP
KSAGAFQQWVHNAKPSQMVRNSLQYLRIDSEVRTQKIAQWNRPVWWPLVVLAVVLVLVVW
PAWRMVKLQQQRTALPLKANGQGGSR
NT seq
2241 nt
NT seq
+upstream
nt +downstream
nt
atgacgttgggatgcttgtatcgatccgtgctagcggcagggcttgccttgctgctggct
ggctgcgatctggtcactgatccgattaacagtccttatcaggccggtgctgaggcagac
aacacactatacactgcctttacccagcgctcgccacgctacctagacccagccaagtcg
tactccagtgatgaaacgccttacacttacaacatttatgagccgctctatggctatcac
tatttgaaacggccttacgagctgatagcacgagcggcagcgcaagtagcccagccaata
ttgcttgacgccaatggcaatgtcttgcctgatacggttgcgcctgatttggtgcacgag
agtattcatgagatcaagttgcgtccaggtattttgtttcagccgcatccggcattcgcc
aaaaagcctgatggccagtacacgtactatccgctagctcccggtgcgctcgaagatcgt
tatgccattaccgactttgctcaaaccggtacccgcgagctgactgcccacgattatgtc
tatgcgttcagacgcttggcgagtccgcgtgtggcctcgccaatttattcaacactggcg
cagcatgtggtggggtttgccgagtatggcgagcagttaaagactgaggatgccaaactg
cgtgaggcaggcgatggaaacaatttgccatggcttgacctgcgtgaatatgcgtttgat
ggcgttcaagcagttgatgatcactccttgcgtattcgcgtcaaaggtagctacccgcag
ttcaagtattggctgtcgatgacctttaccgccccggtgccttgggaggccgatcgcttc
tatagtcagccaggcatggccaccaacagcttgtcgctcaatacctggccggtgggtacc
gggcctttcatgatggtcgagtccctgcaaaaccggcgccatgtactcgcacgcaatccg
aatttccgaggtgaaccttacccttgcgaaggtgagccgggcgatcgggaggcaggactg
cttgaggactgtggcaagatgacgccgtttgtggatcgcatggtttttagtatcgagaaa
gagtcaataccgttgcagggtaagttcatgcagggctactacgatttgcccgagtccaat
cggggcgatataggcgttgcgatgctggtggcagctggcgactcttctgaaaaagctgcg
ctttacgctgagcgcggcatacagctgcctagcaccgtagaagcctctatcttttatctg
ggctttaattggcttgatcctgttgtcggtaaaggcgatacgcctgaacagcaggagaaa
aaccgcaagttacgtcaggcattgaccattgcgtttaactgggaagagttcatcgctatc
ttccgtcaaggtcaagcacaaccagcttatgggccagtgccaccaggcattctgggctac
caggaggcaccagagggcattaatcgaagcatttatgacgtcgtcgatggcaaggcccgg
cgcaagtcactggattacgcccggcaattgctggcgcaagcgggctatccgaacggccga
gatgaggtgaccgggcagccgctggtgctgtattttgattcagcagctggtgccaatgca
tcaagccccacgcttgactggatgcgccggcaggtcggcaagctaggcatccagctcgat
attcgcgccaccgactacaaccgcttccaggaaaaaatgtcgcgcggcgtggcgcagatg
ttcatgtggggctggatcgccgactatcctgatgccgagaactttctgttcttgctctat
ggcaaacaggtcaaggcaggcaagggtggcgagaatgcggccaactacagcaatcctgaa
tatgatgccctatttgaaaaaatgcgagacctgcctgacggacccgagaaggcggccatt
atcgatcagatgatcaagatcgtgcagcatgatgcaccgtggatgtttgggttttttcct
aaatcagctggcgcttttcagcaatgggtgcataacgccaagccctcacagatggttcgt
aacagtttgcaatacctgcgtatcgacagcgaagtaaggactcagaagatcgcccaatgg
aatcggccagtttggtggccactggtggtcttggccgtggtgttggtgctcgtggtctgg
ccggcctggcgcatggtcaagctgcagcagcagcgcaccgccttgccactgaaggccaac
ggccaaggaggctcgcgatga
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