Orrella daihaiensis: DHf2319_10145
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Entry
DHf2319_10145 CDS
T08894
Symbol
rfaD
Name
(GenBank) ADP-glyceromanno-heptose 6-epimerase
KO
K03274
ADP-L-glycero-D-manno-heptose 6-epimerase [EC:
5.1.3.20
]
Organism
odh
Orrella daihaiensis
Pathway
odh00541
Biosynthesis of various nucleotide sugars
odh01100
Metabolic pathways
odh01250
Biosynthesis of nucleotide sugars
Module
odh_M00064
ADP-LDmanHep biosynthesis, sedoheptulose-7P => ADP-LDmanHep
Brite
KEGG Orthology (KO) [BR:
odh00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
DHf2319_10145 (rfaD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
odh01005
]
DHf2319_10145 (rfaD)
Enzymes [BR:
odh01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.20 ADP-glyceromanno-heptose 6-epimerase
DHf2319_10145 (rfaD)
Lipopolysaccharide biosynthesis proteins [BR:
odh01005
]
Core region
DHf2319_10145 (rfaD)
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GFIT
Motif
Pfam:
Epimerase
GDP_Man_Dehyd
RmlD_sub_bind
3Beta_HSD
NAD_binding_4
Motif
Other DBs
NCBI-ProteinID:
UOD49806
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Position
complement(2142380..2143381)
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AA seq
333 aa
AA seq
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MIIVTGAAGFVGANILRGLNARGETNILAVDDLTDGDKFVNLVGCEIADYMHKADFRQMV
THGSLPSARAVFHEGACSDTTERNGHYMMDNNYRVTLELFEWAQAQRVPLIYASSAAVYG
AGPVYAEDLANERPLNVYGYSKFLFDQVVRARFATLTAQVVGLRYFNVYGPHEQHKGRMA
SVAFHNMNQFVTEGHVKLFGGWDGYPDGGQKRDFISVDDVVSVNLHFLDNPQISGIFNCG
TGRAQPFNDVASSVVNAISAARGQPELSLDELVAKDILRYIPFPDDLKGRYQSYTQADMG
ELRAAGYEKPLKDVQTGVADYVRYQIEHGYLKI
NT seq
1002 nt
NT seq
+upstream
nt +downstream
nt
atgattatcgtgaccggggcggctgggtttgtcggtgccaatattttgcggggcttgaat
gctcgtggtgagacgaatattctggcagtcgatgatttgactgacggtgacaagtttgta
aatctggtgggctgcgagattgcggactatatgcataaagcggatttccgtcagatggtg
actcacggcagtctgccgtcagcaagagcggtgttccatgagggtgcctgttcagatacc
actgagcgtaatggtcactacatgatggacaacaactaccgggtgacacttgagttgttc
gaatgggcacaggcgcagcgtgtacctcttatttacgcttcctcggcagcagtctatggg
gcgggtcccgtctatgctgaggacttggccaatgagcgccctttgaatgtgtatggctac
tccaagtttctgtttgatcaggtagtgcgagcgaggtttgcaacgttgacggctcaagtc
gtgggactacgctatttcaacgtgtatgggccgcacgaacagcacaagggacgcatggcc
tctgtggcgtttcacaacatgaaccagtttgtgactgaggggcatgtgaaacttttcggg
ggatgggacggttaccccgatggcgggcaaaagcgagatttcatctctgtcgatgatgtg
gtgtcggttaatctgcattttctggataatccgcagattagtggcatttttaattgtgga
acaggtcgtgctcagccttttaacgatgttgcgagttccgttgtcaacgctattagcgct
gcgcggggccagcccgagttaagtctggatgaactggtggctaaagatatcctgcgttac
atcccgtttccagacgatttaaagggtcgctatcaaagttacacgcaggctgacatgggc
gaattgcgcgccgcaggctacgagaagcctttaaaggatgtacaaacaggcgtggcagat
tacgtgcgctaccaaatcgagcacggctatctaaagatttag
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