Orrella daihaiensis: DHf2319_10680
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Entry
DHf2319_10680 CDS
T08894
Name
(GenBank) AMP-binding protein
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
odh
Orrella daihaiensis
Pathway
odh00061
Fatty acid biosynthesis
odh00071
Fatty acid degradation
odh01100
Metabolic pathways
odh01212
Fatty acid metabolism
odh02024
Quorum sensing
odh04146
Peroxisome
Module
odh_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
odh00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
DHf2319_10680
00071 Fatty acid degradation
DHf2319_10680
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
DHf2319_10680
09145 Cellular community - prokaryotes
02024 Quorum sensing
DHf2319_10680
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
odh01004
]
DHf2319_10680
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
odh04147
]
DHf2319_10680
Enzymes [BR:
odh01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
DHf2319_10680
Lipid biosynthesis proteins [BR:
odh01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
DHf2319_10680
Exosome [BR:
odh04147
]
Exosomal proteins
Exosomal proteins of breast milk
DHf2319_10680
Exosomal proteins of breast cancer cells
DHf2319_10680
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-ProteinID:
UOD51679
LinkDB
All DBs
Position
complement(2260211..2261782)
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AA seq
523 aa
AA seq
DB search
MNTNRDRVALVSLGVQLTYGELDRLSLAWAAWLQSEGIKPGDRVAIMLPNMLASPVTLIG
TLRAGCVVVNVNPLYTARELQSQLRDSRPDVIVLFEAFAATLQQVPASDRPGRVVLAAAG
DLMPRLKGGLVNFVVRHVQRKVPAWKLDGASRLPEVLKLGANASFTPVQITPEHLAFLQY
TGGTTGEPRAAMLSHRNVIANILQVHEIAQPALGDLLPKPLTMLTALPLYHVFAMTVCEL
YALYAGMRIVLVINPRDLKALTKIWRTERPHIFPAVNTLFAALLRHEPFKQLDFSNLRIS
LGGGMAIHQPVAEQWQRLTGRTIVEGYGMSETSPVICANRTDATSFTGTVGFPLPGTEVK
ILDDDRQPVADGQPGEIAVRGPQVMLGYWQAPEATSQAMTADGYLLTGDIGVREPSGQVR
IVDRKKDMILVSGFNVYPAEIDAVFASHPDVTECAAVGVPDGEGGEAIKLFVVPAKSNVD
TTAMQAWARERLTGYKRPREIVLVQSLPKNTVGKTLRRMLRDQ
NT seq
1572 nt
NT seq
+upstream
nt +downstream
nt
atgaacactaatcgggaccgcgttgcattggtctcgctcggcgtgcaattgacctatggt
gagttagatcggctatcacttgcctgggcagcttggttgcagtctgaaggaataaagcct
ggagatcgagtagccatcatgttgcccaacatgctggctagcccggtgaccctaattggg
acgcttagggcaggttgtgtggttgtaaatgtcaatccgctctacacagcacgcgagctg
cagtcgcaactcagagacagtcgacctgacgtcattgttttgtttgaggcgtttgctgcg
accttgcagcaagtgccagcctcagatcgacctggtcgcgtggtgttggccgcggctggt
gatttgatgccgcggttaaaaggtggattggttaattttgtcgtgcggcatgtgcagcgc
aaagtgccagcttggaaactagatggtgccagtcggctgcccgaggtcttaaagctcgga
gcgaatgcctcgtttaccccggtgcagattacccctgagcatctggcttttttgcaatac
acgggcggcactacgggtgagccacgtgcggcgatgctcagtcaccgcaacgtcatagcc
aatattttgcaggtgcatgagatagctcagccagcacttggtgatttattgcctaaacct
ctgacgatgttgactgcgttgccgctttatcacgtgtttgcgatgactgtttgcgagctt
tatgcactgtatgccggcatgcggattgttttggtgattaatccccgtgacttgaaagca
ttgaccaagatatggcgcaccgagaggccgcatatttttccggccgtcaacacactgttt
gcggcgttattgcgtcatgagccattcaagcagctagatttttcaaatttgaggatttcg
ctgggtggcgggatggcgatacatcagccagttgctgagcaatggcagcggttgacagga
cgcacgattgtggagggctatggcatgtctgagacgtcaccggtcatctgcgctaatcga
accgatgccacgagctttacgggtaccgtgggctttcctttgcccgggactgaggtcaag
attcttgacgatgacaggcagcctgtggctgatggtcagcctggcgagatcgcagtcagg
ggaccgcaagtgatgctgggctactggcaagcgccagaagcgacatcgcaagccatgacg
gctgacggatatctgctcacgggcgatattggtgtgcgtgagccgagtggccaagtaagg
atcgtagatcgcaaaaaagacatgattctggtctcagggtttaacgtttatcctgccgag
atcgatgctgtgttcgccagccacccggatgtaaccgagtgtgcggctgtaggggtgcct
gacggtgagggcggggaggccatcaagttgtttgtggtgccggccaagtcaaacgtggat
acaacggccatgcaggcatgggcgcgcgagcgtttgacgggctataagcgacctcgagaa
atcgtgttggtgcagtcactgcctaaaaatacggttggcaaaactttgcgcaggatgctg
cgcgatcaatga
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