Orrella daihaiensis: DHf2319_10860
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Entry
DHf2319_10860 CDS
T08894
Symbol
dnaX
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
odh
Orrella daihaiensis
Pathway
odh03030
DNA replication
odh03430
Mismatch repair
odh03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
odh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
DHf2319_10860 (dnaX)
03430 Mismatch repair
DHf2319_10860 (dnaX)
03440 Homologous recombination
DHf2319_10860 (dnaX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
odh03032
]
DHf2319_10860 (dnaX)
03400 DNA repair and recombination proteins [BR:
odh03400
]
DHf2319_10860 (dnaX)
Enzymes [BR:
odh01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
DHf2319_10860 (dnaX)
DNA replication proteins [BR:
odh03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
DHf2319_10860 (dnaX)
DNA repair and recombination proteins [BR:
odh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
DHf2319_10860 (dnaX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNAX_ATPase_lid
DNA_pol3_gamma3
AAA
DNA_pol3_tau_5
AAA_22
RuvB_N
AAA_16
AAA_14
AAA_5
AAA_18
PIF1
AAA_2
AAA_30
TsaE
Mg_chelatase
nSTAND3
DUF3646
AAA_28
RsgA_GTPase
AAA_assoc_2
WDR72_alpha-sol
RCF1-5-like_lid
ABC_tran
Herpes_Helicase
Motif
Other DBs
NCBI-ProteinID:
UOD49932
LinkDB
All DBs
Position
complement(2298885..2300567)
Genome browser
AA seq
560 aa
AA seq
DB search
MSYLVLARKWRPRDFESLVGQDHVVRALTHALSTGRLHHAWLFTGTRGVGKTTLSRILAK
SLNCETGITATACGQCRACTEIDGGRFVDYVELDAASNRGVEEMTQLLEQAVYAPAVGRF
KVYMIDEVHMLSGHAFNAMLKTLEEPPPHVKFILATTDPQKIPPTVLSRCLQFNLKQMPP
EAVAEYLQKVLTQEGIPYESKALRLIGQAASGSMRDALSLTDQAIAYSSANLSAEAVRTM
LGSVDQTHLTQLLKALLSGDAAGVLAVADALASRGISFRAALADLAVLMSQLAIHQRVPT
ESDSLDALDDEQRELAKMMPADLLQLFYTVAVHGRQEMSLAPDEYAGFMMVCLKMLSFVD
VNASDMQPKPSAEKKTLTYEQIDQADQSPARSSVIKNQSDQSTVPIQASENKTQTKALED
SIPDTQIKLDERFVLNWPHFAVGLPLTGMAQQLATQSACAGASDDALSLVVPTQALTQGA
HVKRLSEVLAQTLGRPIQIKLMVGELGEGASSQSIADAQARERQLEAEEIVRDDPFVNAL
IEGFGAHVVPGSVRAADGSG
NT seq
1683 nt
NT seq
+upstream
nt +downstream
nt
atgagttatttagttctagcccgaaagtggcggccgcgagatttcgagagcctggtcgga
caagatcacgtggtccgagcgttaacgcacgccttatctacaggtcggttgcaccacgcc
tggctttttacgggtactcgtggtgttggtaaaaccaccttgtctcgaattttggctaaa
tcgctgaactgtgaaactggcattacggccactgcctgcgggcaatgtcgagcttgcact
gaaatagatggtggtcgctttgtcgactacgtcgagcttgacgcagcatcgaaccgtggt
gttgaggaaatgacgcagctcctggagcaagctgtgtatgcgccagcggtcgggcgcttt
aaggtttacatgatcgacgaagtgcacatgctctctggtcatgcgtttaatgcgatgctc
aagacgcttgaagagccgccaccgcatgtcaaattcattttggcgacgactgacccacaa
aagattccccccacggtattatcgcggtgcctgcaatttaacctgaagcagatgccacct
gaggcggtcgctgaatacttgcaaaaagtattgacgcaagagggtataccctatgagtcc
aaagctctgcggctaattggtcaggctgcctctgggtccatgcgagatgctctttcactg
acggatcaggccatcgcttatagcagtgccaacctgagtgctgaggctgtgcgcaccatg
ctcggtagcgtggatcagacccatctgacccagttattaaaagccttgctcagcggcgat
gccgctggtgttttggcggtcgcagatgcgttggctagccgtgggatttcgtttcgagct
gcactggcagacctcgctgtgctcatgtcgcagttagccatacaccagcgggtgcccaca
gagtcggatagtctggatgcactagatgatgagcaacgtgaactggcaaagatgatgcct
gcggatttgctgcaattgttctataccgttgctgttcatggtcgccaggagatgtcactg
gcgcccgatgaatatgctggatttatgatggtttgtctgaaaatgttgtcgtttgtcgac
gttaatgcatcagacatgcaacccaagccgtcggctgaaaaaaaaactctgacgtatgag
caaatcgaccaagctgatcaaagtcctgctcggtctagcgtcattaaaaaccaaagcgac
caatcgactgttccgattcaagcgtcagaaaacaagactcaaaccaaggcgcttgaggat
tcaatcccagatactcagattaagctagatgagcgattcgtacttaattggcctcatttt
gcggttggcttgccactgaccggtatggctcagcagctcgccacccagtcggcctgcgcg
ggtgcaagcgatgatgcgttatcgttagttgttccaacacaggcactcacccagggcgct
cacgttaaacgtttgtccgaagtgcttgcccagacactagggcggcccattcagatcaag
ttgatggtgggtgaattgggcgagggggcttcctcccagtcgattgcggacgctcaggca
cgcgagcgacagctagaggcggaagaaattgtgcgcgatgatcctttcgtgaacgcattg
atcgaagggtttggtgcacacgttgtacctggatcggtgcgtgcggccgatgggtctggt
tag
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