KEGG   Orrella daihaiensis: DHf2319_11570
Entry
DHf2319_11570     CDS       T08894                                 
Name
(GenBank) LysM peptidoglycan-binding domain-containing protein
  KO
K11891  type VI secretion system protein ImpL
Organism
odh  Orrella daihaiensis
Pathway
odh03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:odh00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    DHf2319_11570
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:odh02044]
    DHf2319_11570
Secretion system [BR:odh02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   DHf2319_11570
SSDB
Motif
Pfam: IcmF-related_N LysM LysM3_LYK4_5
Other DBs
NCBI-ProteinID: UOD50062
LinkDB
Position
complement(2452933..2456790)
AA seq 1285 aa
MMRKVLTALLVIVLLALLAVLSWMVVLYLQWPFWGVFAIFFGVIAAYFGLKALRTIFVRT
RVKARLLATESKAAMVASQQLDFKHDLLEKWKSAVGLLKKSQLRKFGNPLYVLPWYMVMG
ESGAGKTTAITRSRLTPMLRETAQTKQIAQTSSCDWWFFSEAVVIDTAGRYVSPDGDARD
HEEWDYLLELFGKYRAREGLNGLVVAIDAPTLLGGDVATIESRGRSLRDRIDQLMRLFEK
RFPIYIMVTKCDQIYGFTEWAEQLTDEQSQEAMGFLSGEAKGIGDEQYFATHALQTMSDR
LDRLRLDMAMRGVALTPEMLLLPDEVTRLNSGLQWFLKSALGHNPYLEDPFLRGLFLTSG
RQDSPLPSLLGQLLASVPQAAQGTAKPKGLFIHDIFSRILPKERNTALPGQIVSRWRRVT
ANMALVSWLSLCVAAMVFLVVSYQSTSATIKRFATAIPENFGELSSESASKETEIEQLSN
GLMVVGLILKEESNWNTRWLAFNPEVNALENKLKQVYVRKFRQVQNSLSGVNIDVQTLLK
SPDPTTRAYALLTLVRYINMVQARVNGADYQQILAMPQVPQQTIDALDPELSKRLSAGFS
DLLVAAIAWSPTDDRYLTDSLREDREMLLAEIFKTPQMEWLLDWANSLPVVSPITLGEFW
NPDVVTRVGLQIDGGLTLRGKGRIDEFVAELQKALQNSNEIVKASNDFYVWYREERLNAW
RSLAWGIMEGENLLVTEPDFRNVVASLGTVNSPFNLFFKKLQSEFEDVPANQSPSWLEFA
RYYIRLADQAKSNPTIKGAAGLVNAVNSVGGQALRDSLAQGTNLVPGEITRARDDITLFE
QYVTERQAAAVEVMRGVNAAYDMSSQYFGGTTGPEASASVLARMDQNFQAFKANSRYTSA
DDEVIWRVIEGPVDTIKHYALEQASCKIQQDWEKDVMWKTQLAVNPQELSNQLFGEQGTV
WTFVDGPAKNFITRVGGSLLPATVSGYQFPFASGYIGFLNQAVTNRVSAVVRQQLAKAST
TKSAKLSLAASPIGVNDGAKARPYAAILSIQCAQEAIELSNLNMEASDTFEWKPDQCGEV
TLDIEIDNLTLTKRYPGQLGLSMFLQEFQDGARVFTPADFPAAMQQLDDLNVREITLRYD
IQGRDDVLRLAEDYSYVLEQTTPSTLPAVSRLDIEVPARAGSCWTTSTAPQISLTVPRII
EEQVQKKVNPPPKPPEPPLPPIEPLKPVPTKEITIVEGDTLFSIGRRYRVDLMILRDLNS
LKTDKIVVGQKLLVPIWPDVVGPAN
NT seq 3858 nt   +upstreamnt  +downstreamnt
atgatgcgcaaggtgttaaccgcgctactcgtgatcgtattgctggcgttgctagcagtg
ctgagctggatggtggttctttacctgcaatggcccttttggggtgtgttcgcaattttt
tttggtgtgatcgcggcctatttcggattaaaggcgctgcgaaccatttttgtacgcacc
cgcgtaaaggccagattgctcgcgactgagagcaaagccgcgatggttgcgagtcagcag
ttggatttcaagcatgacttactggagaaatggaaatctgccgttggcctgctgaagaaa
tcccagttgcgcaagttcggcaatccgctctatgtgctgccctggtacatggtgatgggc
gagtccggtgccggtaaaaccacggcgattactcgctcacgtctgactccgatgttgcgc
gaaacagcgcaaacaaagcagattgcccagacaagcagttgcgattggtggttctttagt
gaagccgtggtaatcgatacggccggacgctacgtatcacccgatggtgatgcacgcgac
cacgaggaatgggattatttgctggagttattcggcaaatatcgcgctcgtgagggcctc
aatggcttggtggttgcgattgatgcaccgacgcttcttggcggtgacgtggcgacgatc
gagagccggggccggtcactgcgcgatcgcatcgatcagttgatgcgcctgttcgagaaa
cgttttccgatttacatcatggtcaccaagtgtgaccagatctacggttttaccgaatgg
gctgagcagttaactgatgagcagtcgcaagaggccatggggtttctgtcgggagaagcc
aaagggatcggggatgagcagtacttcgccacacatgcccttcagaccatgtctgatcgt
cttgatcgtttaaggcttgatatggctatgcgaggcgttgcgctaacgccagagatgcta
cttctgccagacgaggtcacacgtttgaactcaggtctgcagtggtttctcaaatctgcg
cttggtcacaacccttaccttgaagacccctttttgcgggggttgtttttgaccagtggc
cggcaagattcaccattaccgagtttgctgggacaactgctggcgtcagtccctcaggcc
gctcagggcacggccaagcccaagggtctgtttatccatgatattttttctcggattttg
cctaaggaacgcaatactgcgttgcccggacagattgtcagccgctggcgccgggtcacc
gccaatatggcgctggtgtcatggttaagtctctgtgtggctgctatggtttttttggtg
gtgtcatatcagtcgacttcagctacgatcaaacgctttgctactgctattcctgagaac
tttggcgagttgtcgagcgaaagtgcgagtaaagaaactgagattgaacagctaagcaat
ggtctgatggtggttggactgattctgaaagaagagagcaattggaatacgcgatggttg
gcgttcaatccagaggttaatgccctggaaaataagctcaagcaggtttatgtcaggaag
tttcggcaagtacaaaactcgctatctggtgtcaacattgatgtccagacattgctgaaa
tcaccagatccaacgaccagggcgtacgcgttgttaactttggttcggtatatcaacatg
gttcaggcaagggtcaatggtgccgattaccagcaaattctggccatgccccaagtgcca
cagcaaaccattgatgcgttagatccggagttgtcaaagaggttgtcggctggcttttct
gatttactagtggcggcaattgcctggtccccaactgatgatcgttacctcacggattcg
ctgcgcgaagaccgggagatgttactggcagagatttttaaaacccctcaaatggaatgg
ctactggattgggcgaattctttgccagttgtctcgccaattacgctgggtgagttctgg
aaccccgatgtagtgactagagtggggttgcaaatcgatggagggttaacactgcgcggc
aagggtcgaattgatgagttcgtcgctgagttgcagaaagccttacaaaacagtaacgag
attgtgaaagcttcgaacgatttctatgtatggtatcgggaagagcgcctcaatgcttgg
cgcagtctagcttggggaatcatggaaggagagaaccttctggtgaccgagccggatttc
cgtaatgtcgtggctagccttggcacggtcaatagtccatttaatttgtttttcaagaaa
ctgcagagcgagtttgaggacgtgccagctaatcagtcaccatcatggcttgagtttgcg
cgttactacatcaggcttgctgaccaggcaaagtctaatccgaccataaaaggtgctgcc
ggtttggtcaatgccgtcaatagtgttggtggtcaagctttgcgcgactcattggcgcaa
ggcactaatcttgtaccgggcgaaatcaccagagcacgtgatgacattaccttgtttgag
cagtatgtcaccgagcgccaagccgcagccgttgaagtcatgcgcggtgtgaacgcagct
tacgacatgagctcgcagtattttggagggacaactgggcctgaggcgagtgcgtcggtt
ctagcgcgcatggaccaaaatttccaggctttcaaggctaattcacgctacacaagcgca
gatgatgaggtcatttggcgtgtcatcgaaggcccagtcgatacgattaagcactacgct
cttgaacaggcatcctgcaaaatccagcaggactgggaaaaggacgtgatgtggaaaacc
cagcttgccgtcaatccacaggaattaagcaatcaactctttggcgagcagggcactgtt
tggactttcgtggatggacccgctaaaaatttcatcactcgagtgggtggttcactgctg
ccagccacggtttctggctaccaatttccgtttgcgtctggctacatcgggtttctgaat
caggcggttaccaaccgcgtgtccgcagtggttcgacagcagttggcgaaagcctcaact
accaaaagcgcgaaactgtcgctcgcagcgtctcctattggtgtcaatgacggtgcaaaa
gcaaggccctatgcggccatactcagcattcagtgtgctcaggaagcgattgagttaagc
aacctgaatatggaagcaagcgatacgtttgagtggaagccagaccaatgcggtgaagtc
acgctcgatatcgagatcgacaacctgacattgaccaagcgttatccgggtcaacttggg
ctatcgatgttcctgcaggaatttcaggatggtgcacgggtctttacaccagcggatttt
ccggctgccatgcagcaactcgatgatttgaacgtacgtgaaatcacgttgcgttatgac
atacagggtcgtgatgatgtgttaaggctcgctgaagattatagctatgtgctggagcaa
accacgccctcaactttgccagctgtttccagactggatattgaggtgcctgctagggcg
ggaagctgttggacaaccagcactgcgccacagatttctctgaccgtgccccgcatcatc
gaagagcaagtgcaaaagaaagtgaatccgccacccaagcctcccgagccaccgttgccg
cctatcgagccattaaagccggtgccgaccaaagaaataacgattgttgaaggcgatacg
ctgttttcgattggtaggcgttatcgggttgatctaatgattttgcgcgatctcaacagc
ctgaagactgataagatcgttgtaggccagaagttgctggtgccgatatggccggacgtg
gtcggccctgcaaactag

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