Orrella daihaiensis: DHf2319_12055
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Entry
DHf2319_12055 CDS
T08894
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
odh
Orrella daihaiensis
Pathway
odh00260
Glycine, serine and threonine metabolism
odh00460
Cyanoamino acid metabolism
odh00630
Glyoxylate and dicarboxylate metabolism
odh00670
One carbon pool by folate
odh00680
Methane metabolism
odh01100
Metabolic pathways
odh01110
Biosynthesis of secondary metabolites
odh01120
Microbial metabolism in diverse environments
odh01200
Carbon metabolism
odh01230
Biosynthesis of amino acids
odh01240
Biosynthesis of cofactors
odh04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
odh00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
DHf2319_12055
09102 Energy metabolism
00680 Methane metabolism
DHf2319_12055
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
DHf2319_12055
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
DHf2319_12055
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
DHf2319_12055
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
DHf2319_12055
Enzymes [BR:
odh01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
DHf2319_12055
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GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
Aminotran_5
Cys_Met_Meta_PP
Motif
Other DBs
NCBI-ProteinID:
UOD50157
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Position
complement(2564733..2565977)
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AA seq
414 aa
AA seq
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MFDRTLTLDRVDPEVWSAIQKEDQRQEQHIELIASENYTSPAVMQAQGSQMTNKYAEGYP
GKRYYGGCEYVDIVEQLAIDRLKQLFGAEAANVQPNSGSQANQAVYLAVLKPGDAVLGMS
LAEGGHLTHGASVNASGKLYNFHQYGLDANEVLDYAKVEALAQEHKPKLIVAGASAYSLK
MDFERFAQIAKDNGALFLVDLAHYSGLVAGGAYPNPVPYADFVTSTTHKGLRGPRGGVIM
MKAEHEKIINSAIFPGIQGGPLMHVIAAKAVAFKEALDPSFKDYAAQVVKNAQVLAQTLV
KRGLRIVSGKTESHVMLVDLRAKGITGKDAEKALGEAHITVNKNAIPNDPEKPFVTSGVR
LGTPAMTTRGFKEAEAELTGNLIADVLDKPTDAANLNAVRERVHALTSAFPVYR
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
atgtttgaccgtactcttacgcttgaccgagttgacccggaggtctggagcgctatccag
aaagaagatcagcgtcaggaacagcacatcgagctgatcgcctctgagaactacaccagc
cctgcggtgatgcaggctcaggggtcgcaaatgaccaacaagtacgccgagggctacccg
ggcaagcgttattacggtggttgcgagtacgttgatattgttgagcagctcgcgatcgat
cgtctgaagcaactgtttggtgccgaggcagccaatgtgcagcctaattccggctcgcag
gccaaccaggccgtttatttggcggtgctaaagccaggtgatgcggtgttgggcatgagt
ttggctgaaggcggtcacttgacccacggcgctagcgtgaatgcctcgggtaagttgtat
aactttcatcagtatgggctagatgccaacgaggtgctcgactacgccaaggttgaggct
ttggcccaagagcataagcccaagctcatcgtggcgggtgcttcggcttattcgctgaaa
atggactttgagcggtttgcccagatcgccaaggataacggcgctctctttttagtcgat
cttgctcattactcgggattggtcgccggcggcgcctatcccaacccggtgccttatgca
gactttgtgacctccacaactcacaaggggctacgtggcccacgcggtggcgtgatcatg
atgaaagcagagcacgagaagattattaattcagcgatcttcccgggtattcagggtggt
ccattgatgcatgtgattgctgcaaaagcggtggcatttaaagaggcgttggacccgagc
ttcaaagactatgccgcccaagtcgtcaaaaatgctcaggtgttagcgcagacattggtc
aagcgtggtttgcgcattgtttctggcaagacggaaagtcacgtcatgctggtcgatttg
cgtgccaaaggcattaccggtaaagatgctgagaaggcattgggcgaagcccatattacg
gtgaataagaacgctatcccaaatgacccggaaaagcctttcgtgactagcggtgtacgt
ctgggaacgcccgccatgaccacgcgtggtttcaaggaggcagaagctgaattgaccggc
aatctgattgctgatgttctggataagcccaccgacgctgcaaatctgaatgccgttcgt
gagcgagtgcatgcgttgacatcagcttttccggtctatcgctga
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