Orrella dioscoreae: ODI_R0061
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Entry
ODI_R0061 CDS
T05133
Name
(GenBank) DNA-directed RNA polymerase alpha subunit
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
odi
Orrella dioscoreae
Pathway
odi03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
odi00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
ODI_R0061
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
odi03021
]
ODI_R0061
03400 DNA repair and recombination proteins [BR:
odi03400
]
ODI_R0061
Enzymes [BR:
odi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
ODI_R0061
Transcription machinery [BR:
odi03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
ODI_R0061
DNA repair and recombination proteins [BR:
odi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
ODI_R0061
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
AAA_lid_4
RAD51D_N
Motif
Other DBs
NCBI-ProteinID:
SOE45976
UniProt:
A0A1C3K713
LinkDB
All DBs
Position
I:complement(62065..63051)
Genome browser
AA seq
328 aa
AA seq
DB search
MSVQGFLKPRSIEVEPMGTHHAKIVMEPFERGYGHTLGNALRRILLSSMTGYAPTEVQIT
GVVHEYSTVPGVREDVVDILLNLKGVVFKLHNRDDVTLVLRKTGSGAVLASDIELPHDVE
IINPNHPIATLTESGKLEMQIKVEKGRGYVPGNVRALTEDRSHTIGRIVLDASFSPIRRV
SYAVESARVEQRTDLDKLVLDIETNGVISPEEAVRQSARILMDQISVFAALEGAGDSYEA
PVRGTPQIDPVLLRPVDDLELTVRSANCLKAENIYYIGDLIQRTENELLKTPNLGRKSLN
EIKEVLAARGLTLGMKLENWPPLGLERP
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
atgtccgtccaaggttttctgaagccgcgttccatcgaagtcgaaccgatgggcacccac
catgccaagatcgtcatggagcccttcgagcgcggctacggccacacgctgggcaacgcc
ctgcgccgcatcctgctgtcgtcgatgaccggctatgcccccaccgaagtgcagatcacc
ggtgtcgtgcatgagtactcgaccgtcccgggtgtccgcgaagacgtggtcgacatcctg
ctgaacctgaagggcgtggtgttcaagctccacaaccgtgacgacgtgaccctggtcctg
cgcaagaccggctcgggcgccgtgctggccagcgacatcgaactgccccacgacgtcgag
atcatcaacccgaaccacccgatcgccacgctgaccgaatccggcaagctggaaatgcag
atcaaggtggagaagggccgcggctacgtgcccggcaacgtgcgcgcgctgaccgaagac
cgcagccacaccatcggccgcatcgtcctggacgcctcgttcagcccgatccgccgcgtg
agctacgccgttgaaagcgcccgcgtggaacagcgtaccgacctggacaagctggtgctg
gacatcgaaaccaacggcgtgatctcgcccgaggaagcggttcgccagtcggcccgcatc
ctgatggaccagatctcggtgttcgccgccctggaaggcgctggcgattcgtacgaagcg
ccggtccgcggtacgccgcagatcgacccggttctgctgcgcccggtcgacgacctggag
ctgacggtgcgttcggccaactgcctgaaggccgaaaacatctactacatcggcgacctg
atccagcgtaccgaaaacgagctgctgaagaccccgaacctgggtcgcaagtcgctcaac
gaaatcaaggaagtgctggccgcacgcggcctgaccctgggcatgaagctggaaaactgg
ccgcctctgggtcttgagcgcccctaa
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