Orrella dioscoreae: ODI_R0234
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Entry
ODI_R0234 CDS
T05133
Name
(GenBank) ABC-type Fe3+ transport system, periplasmic component
KO
K02055
putative spermidine/putrescine transport system substrate-binding protein
Organism
odi
Orrella dioscoreae
Pathway
odi02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
odi00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
ODI_R0234
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
odi02000
]
ODI_R0234
Transporters [BR:
odi02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
ODI_R0234
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_6
SBP_bac_8
SBP_bac_11
SBP_bac_1
DUF5536
TTHB210-like
Motif
Other DBs
NCBI-ProteinID:
SOE46298
UniProt:
A0A1C3K1W8
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All DBs
Position
I:complement(238936..239955)
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AA seq
339 aa
AA seq
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MTSRPTRLLRAALLALGLCAGAAAQAQAQTAICYNCPPEWADWGTQLRVIKEKTGIAVPG
DNKNSGQSLASLAAEKANPVADVVYYGVTFGIQADKDGLVTGYKPAHWDDIPAGLKDADG
KWFAIHSGTLGFMVNVDALRGKPVPKSWADLQKPEYRGLVGYLDPASAFVGYVGAVALNR
ALGGSLDNFDPAIKWFRDMKANQPIVPKQTAYARVLSGEIPILVDYDFNAYRAKYKDGAN
VEFVIPAEGTIAVPYVMSLVQGAPRADNGRKVLDFVLSDEGQAIWANAFLRPVRAGAMSA
EAQKKFLPDSDYARAGTVDYGHMADAQRGFSDRYNKEVN
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
atgacctcccgtcccacccgcctgctgcgcgccgccctgctggcgctcggcctgtgcgcc
ggcgccgctgcccaggcgcaggcccagaccgccatctgctacaactgcccgccagaatgg
gccgactggggcacgcaactgcgtgtcatcaaggagaagaccggcatcgccgtgcccggc
gacaacaagaactccgggcaatcgctggcctcgttggcagccgaaaaggccaatcccgtg
gccgacgtcgtgtactacggcgtgaccttcggcatccaggccgacaaggatggcctggtg
accggctacaagcccgcgcactgggacgacattcccgccggcctgaaggacgccgacggc
aagtggttcgccatccactccggcacgctgggcttcatggtcaacgtcgacgccctgcgc
ggcaagcccgtgcccaagtcgtgggccgacctgcaaaagcccgagtaccgcggcctggtc
ggctatctggaccccgcctcggccttcgtcggctacgtcggcgccgtcgcgctgaaccgc
gcgctcggcggctcgctggacaacttcgatcctgccatcaagtggttccgcgacatgaag
gccaaccagcccatcgtgccgaagcagaccgcctacgcccgcgtgctgtcgggcgaaatc
ccgatcctggtggactacgacttcaacgcctaccgcgccaagtacaaggacggcgccaac
gtcgaattcgtcattcccgccgaaggcaccatcgccgtgccctacgtgatgagcctggtg
caaggcgcgccgcgcgccgacaacggccgcaaggtgctggacttcgtgctgtccgacgaa
ggccaggccatctgggccaacgccttcctgcgccccgtgcgcgccggcgccatgtctgcc
gaagcgcagaagaagttcctgcccgacagcgactatgcccgcgccggcacggtggactat
ggccacatggccgatgcccagcgtggcttctcggaccgctacaacaaggaagtgaactga
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