Orrella dioscoreae: ODI_R0300
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Entry
ODI_R0300 CDS
T05133
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
odi
Orrella dioscoreae
Brite
KEGG Orthology (KO) [BR:
odi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
odi03021
]
ODI_R0300
Transcription machinery [BR:
odi03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
ODI_R0300
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Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
HTH_PafC
HTH_DeoR
HTH_24
Motif
Other DBs
NCBI-ProteinID:
SOE46442
UniProt:
A0A1C3K4J2
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All DBs
Position
I:302451..303335
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AA seq
294 aa
AA seq
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MQTANHSLATASPSLAVAIANPGALGTLDAYISTVNRLPLLTPEQETSLARKLRDTDSLD
AARELVVSHLRLVVSVSRQYLGYGLPHADLIQEGNVGLMKAVKRFDPERGVRLVSFAVHW
IKAEIHEFIIRNWRLVKVATTKAQRKLFFNLRSMRPDGQTLDPAQIDAIARELDVRPQDV
SEMEVRLTGRDMSLENQDDDDDTYAPIAYLSDEGRQEPTQVMERAAQSALQGRGLAGALD
VLDERSRRIVQARWLQDEGGATLHELAQEFGVSAERIRQIEAAAMKKMRAALSA
NT seq
885 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaccgccaatcattccctggctacggcaagcccctcgctggccgtggccatcgcc
aacccgggcgcactgggcacgctggatgcgtacatctccaccgtgaaccgcctgcccctg
ctgacccccgagcaggaaacgtccctcgcgcgcaagctgcgcgacacggattcgctggac
gccgcccgtgagctggtggtgtcgcacctgcgactggtggtctccgtctcgcgccagtac
ctgggctatggcctgccgcacgccgacctgatccaggaaggcaacgtcggcctcatgaag
gccgtgaaacgtttcgaccccgagcgcggcgtgcgcctggtctccttcgccgtgcactgg
atcaaggccgagatccacgagttcatcatccgcaactggcgcctggtgaaggtcgccacg
accaaggcgcagcgcaagctgttcttcaacctgcgcagcatgcgtccggacggccagacc
ctggatccggcccagatcgacgccatcgcgcgcgagctggacgtgcgtccccaggatgtc
agcgagatggaagtgcgcctgaccggccgcgacatgtcgctggagaaccaggacgacgat
gacgacacctacgcgcccatcgcctacctgtccgacgaaggccgccaggaacccacgcaa
gtgatggagcgcgcggcgcagtcggccctgcagggccgcggcctggctggcgccctggat
gtgctggacgagcggtcgcgccgcatcgtgcaggcccgctggctgcaggacgaaggcggc
gccacgctgcacgaactggcccaggagttcggcgtgtccgccgagcgcatccgccagatc
gaagccgccgccatgaagaagatgcgcgcggcgttgtcggcctga
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