Orrella dioscoreae: ODI_R0420
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Entry
ODI_R0420 CDS
T05133
Name
(GenBank) Long-chain-fatty-acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
odi
Orrella dioscoreae
Pathway
odi00061
Fatty acid biosynthesis
odi00071
Fatty acid degradation
odi01100
Metabolic pathways
odi01212
Fatty acid metabolism
odi02024
Quorum sensing
odi04146
Peroxisome
Module
odi_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
odi00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
ODI_R0420
00071 Fatty acid degradation
ODI_R0420
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
ODI_R0420
09145 Cellular community - prokaryotes
02024 Quorum sensing
ODI_R0420
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
odi01004
]
ODI_R0420
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
odi04147
]
ODI_R0420
Enzymes [BR:
odi01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
ODI_R0420
Lipid biosynthesis proteins [BR:
odi01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
ODI_R0420
Exosome [BR:
odi04147
]
Exosomal proteins
Exosomal proteins of breast milk
ODI_R0420
Exosomal proteins of breast cancer cells
ODI_R0420
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
Motif
Other DBs
NCBI-ProteinID:
SOE46704
UniProt:
A0A1C3K4W8
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All DBs
Position
I:434023..435993
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AA seq
656 aa
AA seq
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MSRPESTAATLADTFPALLLAHARERGDRPALREKDLGIWQTYTWSQVAREVERMALGLA
TLGVEPGQHVAVVGENRPRLYMAMMAAQALGAIPVPLYQDAVAQEMGFVLQDADVGVAVV
EDQEQVDKLLEARAQCPQLRSIIYDDPRGLRHYDDPALLSCDALAERGDAHGAAHPDAYA
SAIARVQPQDPAAMFYTSGTTGKPKGVVLTHHALIDRARAVERMESLTDREDVLAYLPPA
WIGQNMFSYTQLLVTGFTVNHPESPETVAIDMRDIGPTYYFAPPRVLEGLLTQVLIRMED
AGWVKRQLFRRCMALARRVGTRILDGEDVGALDRLMYGLGNVLIYGPLRNALGMSRVRIA
YTAGEAIGPDLFVFYRSLGINLKQLYGSTETSVFVCVQADGQVRADTVGPPVAGVEIQVS
EAGEVLVKSPGLFKEYHRNPQATRETMTEDGWFRTGDAGFLDEDGQLKIIDRAKDVGKLA
DGSLFAPKYIENKLKFFPYIKEAVAFGADREIACAFVNIDLEAVGNWAERRGLPYAGYAD
LAGKKEVIDLIAECVDQVNADLAGDAKLGSSQLRRFLVLHKELDPDDDELTRTRKVRRGF
IAQKYAVLIDALFAGQASQYIETEVKFEDGRSGKIAATLTIREATVHPVRAAEAIA
NT seq
1971 nt
NT seq
+upstream
nt +downstream
nt
gtgtcgcgacccgaatccaccgccgccacgcttgccgacaccttcccggcgctgctgctc
gcgcatgcccgggagcgcggcgaccgtccggccttgcgcgagaaggacctgggcatctgg
cagacctacacctggtcgcaggttgcccgcgaagtcgaacgcatggcgctggggctggcc
acgctgggcgtcgaacctggccagcacgtggccgtggtcggcgagaaccggccgcgtctc
tacatggccatgatggcggcccaggccctgggcgccatccccgtgccgctctaccaggac
gccgtcgcccaggaaatgggtttcgtgctgcaggatgccgacgtgggcgtcgccgtggtc
gaggaccaggagcaggtcgacaagctgctggaggcgcgcgcccaatgcccgcaactgcgc
agcatcatctatgacgacccgcgcggcctgcgccactacgacgacccggcgctgctgtcc
tgcgatgcgctggccgagcgcggcgatgcgcatggcgcggcgcatccggacgcgtatgca
tcggccatcgcgcgggtgcagccgcaggaccccgcggccatgttctatacctccggcacc
accggcaagcccaagggcgtggtgctgacccaccatgcgctgatcgaccgggcgcgtgcc
gtggaacgcatggagtcgctgacggaccgcgaggacgtgctggcctacctgccgccagcg
tggatcgggcagaacatgttttcgtacacgcagttgctggtgaccggtttcaccgtgaac
catcccgagtcgcccgagaccgtcgccatcgacatgcgcgacatcggtcccacctattac
ttcgcgccgccgcgcgtgctggaaggcctgctcacgcaggtgctgatccgcatggaagat
gccggctgggtgaagcgccagctcttcaggcgctgcatggcgctggcgcgccgggtgggc
acgcgcatcctggacggcgaggacgtgggcgcgctggaccgcctgatgtacggcttgggc
aacgtgctgatctacggtcccttgcgcaatgcgctgggcatgagccgcgtgcgtatcgcc
tatacggcgggcgaggccatcgggccggacctcttcgtgttctatcgctcgctgggcatc
aacctgaagcagctgtacggctccaccgagacctccgtgttcgtgtgcgtgcaggccgac
ggccaggtgcgcgccgatacggtgggcccgcccgtggcgggcgtggagatccaggtgagc
gaggccggtgaagtgctggtcaagagccccggcctcttcaaggaataccaccgcaacccg
caggccacccgggaaacgatgaccgaggacggctggttccgcaccggcgacgcggggttc
ctggacgaggacgggcaactgaagatcatcgaccgcgccaaggacgtcggcaagctggcc
gatggcagcctgttcgcgcccaagtacatcgagaacaagctgaagttcttcccctacatc
aaggaggccgtggccttcggcgccgaccgcgagatcgcctgcgccttcgtgaacatcgac
ctggaagcggtgggcaactgggccgagcggcgtggcctgccctatgccggctatgccgac
ctggcgggcaagaaggaggtcatcgacctgatcgccgagtgcgtggaccaggtgaacgcc
gacctggccggcgatgccaagctgggcagttcgcagctgcgccgcttcctggtgctgcac
aaggagctggacccggacgacgacgagctgacccgcacccgcaaggtacggcgcggcttc
atcgcgcagaagtacgcggtgctgatcgatgcgctgttcgcggggcaggcgtcgcagtac
atcgagaccgaggtcaagttcgaggatggccgcagcggcaagatcgccgcgacgctgacc
atccgcgaggcaaccgtgcatccggtgcgcgcggcggaggcaatcgcatga
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