Orrella dioscoreae: ODI_R0682
Help
Entry
ODI_R0682 CDS
T05133
Name
(GenBank) Exoribonuclease II
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
odi
Orrella dioscoreae
Brite
KEGG Orthology (KO) [BR:
odi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
odi03016
]
ODI_R0682
Enzymes [BR:
odi01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
ODI_R0682
Transfer RNA biogenesis [BR:
odi03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
ODI_R0682
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
Motif
Other DBs
NCBI-ProteinID:
SOE47168
UniProt:
A0A1C3JX88
LinkDB
All DBs
Position
I:complement(709031..710920)
Genome browser
AA seq
629 aa
AA seq
DB search
MYLFYEEDGGFKAGRILSEADASLQVESESGKRSKIKTASALFKFDAPDAPALIAQAQQQ
AEGIDLPFLWECAPQDEFDATEFAADYYGHAPGAVEKAALILALHGAPVYFHRRGKGRYR
PAPPDILAAALAALEKKRLAAEQQASWVDDMAAGRLPEAIGAIAETLLVRPDKNGMPWKA
LEAACTRLQKTPERLLLDLGAWPHALALHKRRFLATYFPRGIDFGDITLPALPDGLPEAE
VTAYSVDDVTTTEIDDALSVSVLPDGRVRVGVHIAAPALAVTRDSDLDKLARARLSTVYM
PGDKIPMQPDAVNDAFSLEAGRPVPALSLYVTADPATGEIAATETRLERLTVKENLRHNM
LDGQVTEAALQDPDAPLPYADWLRPLWQLAQALSAQRDIVRGKTENNTRVEYSFYLDGNP
DDPDTPVRLVPRQRNAPLDRLVAEYMILANRVWGGLLDECGVPGIYRSQQAGRVRMSTQS
LPHEAIGVPQYAWSTSPLRRYVDLVNQRQLIAAAEHGVSARLVAPYKPRDADLFAIIGAF
DAQYAAWGEFQSNLERYWCLRWLAQQGITRTRAQVLREDLVRLSCAPFVTRVGGLPELER
GQEVELDILGADELALTLDCRYVSTVESA
NT seq
1890 nt
NT seq
+upstream
nt +downstream
nt
atgtatctgttttacgaagaagacggcggtttcaaggcaggccgtatcctgtcggaggcc
gacgccagcctgcaggtcgaatcggagtcgggcaagcgcagcaagatcaagacggccagc
gcgctgttcaagttcgacgcgcccgacgcccccgcgttgatcgcccaggcgcaacagcag
gcagagggcatcgacctgcccttcctgtgggaatgcgcgccgcaggatgagttcgacgcc
acggaattcgccgccgactattacggccatgcccccggcgccgtcgaaaaggccgcgctg
atcctggcgctgcacggcgcgcccgtgtatttccaccggcgcggcaagggccgctaccgt
cccgccccccccgacatcctggcagcggcgctggccgcgctggagaagaagcgcctggcc
gccgagcagcaggccagctgggtcgacgacatggccgcgggccgcctgcccgaggccatc
ggcgccatcgccgaaaccctgctggtgcggcccgacaagaacggcatgccctggaaggcc
ctggaggctgcctgcacccgcctgcagaagacgccggagcgcctgctgctggacctgggc
gcgtggccgcatgcgctggccctgcacaagcgccgcttcctggcgacctatttcccgcgc
ggcatcgatttcggcgacatcaccctgcccgccctgcccgacggcctgcccgaggccgag
gtcaccgcctattcggtggatgatgtcaccaccactgaaatcgacgacgccctgtccgtg
agcgtgctgcccgacggccgcgttcgcgtgggcgtgcacattgcggcgccggccctggcg
gtcacccgcgacagcgacctcgacaagctcgcgcgcgcgcgcctgtccacggtctacatg
ccgggcgacaagatccccatgcagcccgatgcggtgaacgatgcgttctcgctggaagcg
ggccgccccgtgccggccctgtcgctgtacgtgacggccgacccggcgacgggcgagatc
gcggccaccgagacgcgcctggaacgcctgacggtcaaggagaacctgcgccacaacatg
ctggacgggcaggtcaccgaagccgcgctgcaggacccggacgcgccgctgccctacgcc
gactggctgcgtccgctctggcaactggcccaggcgctgtcggcccagcgcgacatcgtg
cgcggcaagaccgagaacaacacgcgggtggaatacagcttctacctggacggcaacccc
gacgatcccgacacgcccgtgcgcctggtgccccgccagcgcaacgcgccgctggaccgc
ctggtggccgaatacatgatcctggccaaccgggtctggggcggcctgctggacgagtgc
ggcgtgcccggcatctatcgctcgcagcaggcgggccgcgtgcgcatgagcacgcagtcg
ctgccccacgaggcgatcggcgtgccgcagtacgcctggagcacctcgccgctgcgccgc
tacgtcgacctggtgaaccagcgccagttgatcgccgccgccgaacacggcgtgtcggcc
cgcctggtggcgccgtacaagccgcgcgacgcggatctcttcgccatcatcggcgccttc
gacgcccagtacgccgcctggggcgagttccagtcgaacctggaacgctactggtgcctg
cgctggctggcgcagcaaggcatcacgcgcacccgcgcgcaggtgctgcgcgaagacctg
gtgcgcctgtcgtgcgcccccttcgtgacgcgggtgggcggcctgcccgaactggaacgt
ggccaggaggtcgaactggacatcctgggcgcggacgagctggcgctgacgctggactgc
cgctacgtctcgacggtggaatccgcctga
DBGET
integrated database retrieval system
