Orrella dioscoreae: ODI_R0797
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Entry
ODI_R0797 CDS
T05133
Name
(GenBank) probable vgr related protein
Organism
odi
Orrella dioscoreae
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Phage_GPD
DUF2345
T6SS_Vgr
Phage_base_V
Sarcoglycan_1
Motif
Other DBs
NCBI-ProteinID:
SOE47366
UniProt:
A0A1C3K0L8
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All DBs
Position
I:complement(854764..862623)
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AA seq
2619 aa
AA seq
DB search
MNASPTAASGYSSLDTATFAQHERLVTLRTPLDAALTVARYTLHEGVDTLFSLRIDCLAS
SAQLDVASLLGKEITLSQRLADGGWRRWHAVVESVEALGSDGGVARYRIVAGPWLGALAW
RRDSFVYQDKTAADVLAELFSDYPLSAHSFAHTGDLPTRPIRTQYRETDLAFVQRVLAEE
GLSFRFDHDQADGDGDGRAARHTLVIFDAETELPQAPGAAVRFHRSDATETEDAIGRFGV
ARRVTANKVTRASWNDRALAAPAAQAQADIGELPELEDYEDTGYLRYADTAVAERDAQRG
LRAHQARVVRYEGEGTARALAPGHRFTLSQHARYEGGNAGGKDGELRDVGDNHYVLLSIT
HEAANNLGKQIAQQLAIDGVEAGSYRNSFSAQPAAAAIAAPWRPRPQAPESMVALVMAAS
EAPISTGRDLRIKVQFPWQRGEKPVEGGLAHRSHGDGQGNAPGDDTSGTWLRVATWQAGP
NWGGNHLPRHGTEVLVEFLDSDIDQPVVTAQLYNDADLPPWSAGVDTETDHPGTLSGWHS
KSLGDGGYNQWLLDDTAEQLRVRMASSAGVSQLNLGFMVTQRPEDTQRGAWRGTGFELRS
DAWTVLRAGQGMLVSTTARALGESTAADMKETLVLLRGAQESAVRLHDSAAQRQARGLAA
NASHDTLIESLDPEAKGRYPDSVSGQPARKPGDDAREGDAPVERIDGARMVLDSPETMNF
ATPATAVLHAGENLHLTSQEDSLISGARTVAYASGQSATLYSHNVGVQVIAGGGPVSLHA
HTDKLLGDAGEDITITSTSEGIEILAQQRITLQADGASVTLDGADIRFTGPGILSVKAAS
HSFIGPASDAASLPGLPQTAIDDPMIVSASIMHKAANTPIAAIASATGLGGTGAGAGLAG
GLGDLGGLAAQALAGGGTLAGINGLPGSLAAAAQGAGGLLGSVASVGEMASAGASGLASR
ALGALPGGMGQTLQNAYGTASGLVSSASGVMQSANGLASSVGALGGAGGLSSLGGAVQGA
SGLASSLGSALPGASGMMASVGNAIPGAAGLTSAVGGALQGAGGMAGAAAGAMQQTMGAA
GQAISGVTGTLAQGAGSAVQGIGGAMSGVMPGAGAATAGIAQGVTQGVGQGLSGALGAGG
ITGAGGSAFGASSASGAVVGAAGAGMTAPLGGSHAGMPGSALAGNPGNAGANTGMGTQAG
LGAATGSSNMSVGQPGAGGLAHAGSAPASAGSAAGPFSNTSSLPASGAAGTPAGGTHVAA
GWQGTGPMAPANAPGVSQGTGLLAGNMATGNGGQLGAMPGQAGTPAAGFANQEGVSGIGA
GGGIASPHSGAAISSQGLHSTTLDARETGMPGVSPSALTASGGGLVTTGNAHTAGLAGGA
GNLPQAGAATAALHGGNLGTGMPRAGLADSRALSAPNMHGVPLDTGSVQSLSSHSTTSSA
SALSAQASLTAHSPLQGTAAPSTPTAITSGLSGTAGTSGLVGVSALAAGAGAGASLAGGL
SGASGLASNLSSLASTAASLGALPGATTLAQAADAAAALAARFTSVPQSVMTGAVPGTAT
SITGISGAPMTGTHTAGIGGAGIGSVGMTATGSASAGLGGVTAGIGQAGTQAGAFPGQVA
TGIGATNNGMPGLGGGALGNTATGSIDASGLPSSAMGAGTVADAGGLGALGSAQASASQA
GMGGAGQGLGGIGGANPVASGGANLPGIGAGAGTSVGATVPGTPGTGFANPGGIAGTHGA
PNGIPGANASGAQASTGQGPLQSGASLPASGSTQAGATTGSTHAGAAYSGNPAAQGGSAA
AGGQPAAGQPYANTGASQTGTGTTAGTTTPAGNPANAQGGVTGGQAGSAPGNPTSASGQP
SQQAGAAPQGAASAQTGASGATNTTGNAAGGAGAANPAGTAAPSASANAPAGANPGVSSG
ATAANGNAGIAAGSTPATAMSGATPATAGTVAGVATPASASAISGTAASGGGMSAAAILG
GGGLAAVAGSAMSSPGLAQTISTSVGQAASSAAQGIGGFANQALGKVGLPMMSAQAPAET
STSGAVGGGGITGGGTLDQAIGGAVAGAVTGAISGGKHDKVLAWAAAGAVLLPLAGKALS
SILGGDASGGGATRPGDGDVIPKPPFPGADTSGSPGWPSATDGAASSNRAPSTSPSSYSG
KSGSHLQYVNLKAREDRWNDGRALDSLDRQTSKPRIHVKFNKPGAHTFTIKVVPGKDNIQ
YSAAEQGRRASYKDVGTSVRTYTTKADGTYIVDDISLPAAGLNTYTFEVRDARNQLVMTE
TVETARRFYIQELVLPGQRPGDPANDVSPALAEFKRLGIDVVQLPRATGPTTGNINIDYE
SGRQLLMGNATRPYQGSEGPAHEPYTIAVCHVQSLASKDGFTQPIVVDAIAGPGQGGAVI
PLVDGTGTGYFLWHGIDNDPWFIDAEFSYVDEKGKSRTVKFPVERLRPWPNDPKMPNACA
TILARMNDFTPTVVKGSLAVKVYVMTGAAAGVAYSGGNLIAVATYDPWDRTDTGYQLETL
VHELGHAIGMTPSGPNWASDPNAWEDFDESKLDRIPNFYSEAGNHCHYGQPKMAESDYVQ
HTGDCVMYGGDTTSIKFCPDCSKGVRKVDLSKGWLRFKL
NT seq
7860 nt
NT seq
+upstream
nt +downstream
nt
atgaacgccagccccaccgcagcgtccggctactcctcgctggataccgccaccttcgcc
caacacgagcggctcgtcacgctgcgcacgccgctggacgccgcgctcaccgtcgccagg
tacacgctgcacgagggcgtggacaccctgttctcgctgcgcatcgactgcctggcctcg
tccgcgcagctcgacgtcgccagcctgctgggcaaggaaatcacgctgtcgcaacgcctg
gccgatggtggctggcgccgctggcatgccgtggtggaatcggtggaggccctgggcagc
gacgggggcgtggcacgctaccgcatcgttgccggcccgtggctgggcgcgctggcgtgg
cggcgcgacagcttcgtctatcaggacaagaccgccgccgacgtgctggccgaactgttc
tccgactatccgctgtccgcccacagcttcgcccacacgggcgacctgcccacccgcccc
atccgcacgcaataccgcgagaccgacctggcgttcgtgcagcgcgtgctggcggaagaa
ggcctgagcttccgtttcgaccatgaccaggccgacggcgacggcgacgggcgcgcggcg
cggcacacgctggtgatcttcgacgcggaaaccgagctgccccaggcgcccggcgccgcc
gtgcgttttcatcgcagcgatgccaccgagaccgaggacgccatcggtcgtttcggcgtg
gcgcgccgcgtcaccgccaacaaggtgacgcgcgccagctggaacgaccgcgcgttggcg
gcacccgccgcgcaggcgcaggccgacatcggcgagctgcctgaactggaggactacgaa
gacaccggctatctgcgttatgccgacaccgccgtcgccgagcgcgacgcgcagcgtggc
ttgcgggcccaccaggcgcgcgtggtgcgctacgagggcgaaggcacggcgcgggccctg
gcccccggccatcgcttcaccctgtcgcagcatgcgcgctatgagggcggcaacgcaggt
ggcaaggacggcgaactgcgtgacgtgggcgacaaccattacgtgctgctgtccatcacg
cacgaggccgccaacaatctgggcaagcagatcgcgcagcaactggcgatcgacggtgtc
gaggccggcagctatcgcaacagtttctcggcccagcccgccgccgcggccatcgccgcc
ccctggcgtccgcgcccgcaagcgccggaaagcatggtggcgctggtgatggcggccagc
gaggcccccatttccaccggacgcgacctgcgcatcaaggtgcagttcccgtggcagcgc
ggcgagaaaccggtagagggcggcctggcgcaccgcagccacggcgacgggcagggcaac
gcacccggcgacgacacgtcgggcacctggctgcgcgtggccacctggcaagccggcccc
aactggggcggcaatcacctgccccgccacggcaccgaagtgctggtggaattcctggac
agcgatatcgaccagcccgtggtcaccgcccagctctacaacgatgccgacctgccccct
tggtctgcgggcgtggacaccgagaccgatcatcccggcacgctgagcggctggcacagc
aagagcctgggcgacggcggctacaaccagtggctgctggacgacacggcagaacaattg
cgcgtgcgcatggccagttccgccggcgtgtcgcaactcaacctgggcttcatggtgacg
caacgcccggaagacacccagcgcggcgcctggcgcggcacgggcttcgaattgcgctcg
gatgcctggacggtgctgcgcgcgggccagggcatgctggtctcgacgaccgcgcgcgcg
ctgggtgagtccaccgcggccgacatgaaggaaaccctcgtcctgctgcgtggtgcgcag
gaaagcgccgtccgcctgcacgacagcgcggcgcaacgccaggcacgcggccttgccgcc
aacgccagccacgacacgctgatcgaatcgctggatcccgaagccaagggccgctatccc
gactccgtctctgggcagccggcacgcaagcccggcgacgatgcgcgcgaaggcgacgcg
ccggtcgagcgcatcgacggcgcgcgcatggtgctggacagccccgagaccatgaatttc
gccacgccggccacggcggtgctgcacgcaggcgagaaccttcacctcacctcgcaggaa
gactcgctgatttcgggcgcgcgcaccgtcgcctacgccagcggccagtccgccacgctc
tacagccataacgtgggcgtgcaggtcatcgcgggcggtggcccggtgtccctgcacgcg
cataccgacaaactcctcggcgacgccggcgaggacatcaccatcacgtccacgagcgag
ggcatcgagatcctcgcccaacagcgcatcacgctgcaggccgacggcgcgagcgtcacg
ctggacggcgcggacatccgcttcaccggcccgggcatcctgtccgtgaaggccgcctcg
cacagcttcatcggtcccgccagcgacgcggcaagcctgcccggcctgccgcaaaccgcc
atcgatgacccgatgatcgtatcggccagcatcatgcacaaggccgccaacacaccgatc
gcggccatcgccagtgcgaccggcctgggtggcacgggcgccggcgcgggcctggccggt
ggcctgggtgacctgggcggcctggctgcccaggccttggccggcggcggcacgctcgcc
ggcatcaacggcctgcctggctccctggcagccgccgcgcaaggcgcaggcggcttgctg
ggttctgtcgcttccgtcggcgagatggccagcgcgggggcaagcggacttgcatcgcgc
gcactgggcgcgctgcctggcggcatgggccagacgctgcagaacgcctacggcactgcc
agcggcctggtgtcgtcggcgtccggtgtcatgcaatccgccaacgggctggcctcgtcg
gtgggtgcgcttggtggcgcgggcgggttgtcctccctcggcggcgccgtccagggggca
agcggcctggcttcttcgctgggcagtgcgctgcctggcgcatccgggatgatggcttcg
gtgggcaatgccattcctggcgccgcaggcctgacctcggccgtcggcggcgccttgcag
ggcgccggcggcatggcaggtgctgctgcgggcgcgatgcagcagaccatgggcgcagcc
ggtcaggccatcagtggcgtcaccggcacgctggcgcagggtgccggcagcgcggtccag
gggatcggcggtgcgatgtcaggcgttatgcccggtgcgggcgccgccacggcgggcatc
gcccagggcgtcacgcaaggtgtcgggcaagggctgtcgggcgcgctgggcgctggcggc
attactggcgcgggtggctcggcctttggtgcttcgagcgcttcgggcgcagtggtcggg
gcggcaggcgcaggcatgacggcgcccctgggcggctcgcatgcaggtatgccgggcagc
gcactggcaggcaaccctggcaacgcaggcgcaaacacgggcatgggcacacaggcaggc
ctgggtgcagcaacgggcagctcgaacatgagcgttggtcagccgggcgcgggcggtctc
gcacacgccggttccgcgccagcctcggcaggatcggcagcaggcccattctcgaacacg
tcctccttgcccgcttcgggcgcggcaggcacacccgcaggcggcacgcacgtcgcggcg
ggatggcaaggcaccggccccatggcccccgccaacgcgccgggcgtctcgcaaggaacg
ggcttgctcgctggcaacatggccacaggcaatggcggccaactgggtgccatgccgggg
caggcaggtacgcccgccgcaggcttcgccaaccaggaaggtgtctcgggcatcggggcg
gggggcggtatcgccagcccgcacagcggcgcggcgatatcgtcgcaaggcctgcacagc
acgacgcttgacgcacgagagaccggcatgcctggcgtttcgccgtcggcactgacagca
agcggggggggcctggtcactaccggcaacgcacacacggccgggttggccggcggtgca
ggcaacctgccccaggcgggtgctgccactgccgccctgcatggcggcaacctcggcacc
ggcatgccccgcgcgggcctcgccgactcacgtgccctctcggcccccaacatgcacggc
gtaccgctggacaccggcagcgttcaaagcctgtccagccacagcacaacctcctcggcc
tcggccttgtctgcacaagcctcgctgaccgcacactcgcccctgcagggcacggcggct
cccagcactcccacggcaatcacatccggcctctccggcacggccggaacatccggcctg
gtgggcgtgtcggcactggcagccggtgctggcgcaggtgcgtcgctggctggaggtctc
tccggcgcgagcggactcgcctcgaatctctccagcctggccagcaccgctgccagcctg
ggcgcactaccgggcgccaccaccttggcgcaggcggcagacgccgctgccgcgctggcc
gcccgcttcaccagcgtcccgcaatccgtgatgacaggcgccgtgcccggcacggcgacg
tccatcaccggtatcagcggcgcgcccatgaccggcacgcacaccgccggcatcggcggt
gcaggcatcggcagtgtgggaatgacggcaaccggctccgcctctgcgggcctgggtggc
gtgactgccggcatcggccaggccggtacgcaggcaggcgccttccccggccaggttgcc
accggcatcggcgcaacgaacaacggcatgccaggcctgggcggcggcgcactcggcaac
accgccacgggatcgatcgatgcaagcggcctgccctcgagcgccatgggcgcgggcacg
gtggctgacgcgggcggcctgggtgcgctgggtagcgcgcaggcaagtgccagccaggca
ggcatgggcggcgcaggccagggcttgggcggcatcggtggcgccaatccggttgccagc
ggcggcgcgaacctgcccggcatcggcgcaggcgccggaacctccgttggcgcaaccgtg
ccgggaacacccggcaccggcttcgccaatcccggcggcatcgcaggcactcacggcgcg
cctaacggcatccccggcgcgaacgccagtggtgcacaggcaagcacgggccaaggtccg
ctccagtcgggtgcaagtctcccggcttccggaagcacccaagccggcgccacgacgggc
agcacccatgccggtgcggcctattccggcaatcccgctgcacagggcggcagcgccgca
gccggtggtcagccggcggcaggccagccctacgccaacacaggcgccagccagaccggt
acaggcaccacagcaggaacgaccacgcccgcgggaaatccggcgaacgcacaaggcggc
gtaacgggcggtcaagccggttcggcgcccggcaacccgacatcggcatcgggtcaacct
tcccagcaggctggcgccgcaccgcaaggcgccgcctctgcacaaaccggcgcctctggc
gccacgaacaccaccggcaatgcagcgggtggcgcaggcgccgccaatccggccggcact
gctgctccctctgcgtcggccaacgcccctgccggcgccaatcccggcgtctcctcgggt
gctacggcagccaacggcaacgcaggcatcgctgctggcagcaccccggcaacggcgatg
agcggggctacccccgcgacggccggcactgtcgcgggtgtcgccacgccggcttcggct
agcgccatctccggaactgccgcatccggcggaggcatgagtgccgccgccatcctgggt
ggtggcggcctggctgccgtggccggatcggccatgagcagccctggcctggcacagacc
atttccacctctgtcggccaggcagcctcatccgcggcacaaggaatcggcggcttcgcc
aaccaggcattgggcaaggtcggactgccgatgatgtccgcgcaagcgccggccgagaca
agcacaagcggcgctgtgggcggcggtggcatcacaggcggcggtacgctggaccaggcc
atcggcggcgccgtggcaggcgcggtcaccggcgcgatctccggaggcaagcacgacaag
gtgctggcctgggccgccgcaggcgcggtgctgctcccgttggctggcaaggcgctgtcc
tccatactcggcggtgacgcttccggcggcggcgccacgcgccccggcgatggcgacgtc
attcccaagccccccttccccggcgccgacacctccggcagccccggctggccctcggcc
acggatggcgcggcaagcagcaaccgcgcaccgtccacgtcgccgtcgagctactccggc
aagtcaggctcgcacctgcaatacgtgaacctgaaggcccgcgaagaccgctggaacgat
ggccgcgcgctggacagcctggaccgccagaccagcaagccgcgcatccacgtgaagttc
aacaaacccggcgcgcacacgttcaccatcaaggtggtgccgggcaaggacaacatccaa
tacagtgccgccgaacagggccgtcgtgcctcctacaaggatgtcggcacctcggtgcgg
acctacacgaccaaggcggacggcacctatatcgtcgacgatatctcgttgcctgcagcc
ggcctgaacacctatacctttgaagttcgtgacgcgcgcaaccagttggtcatgaccgaa
acggtggagaccgcacgccgcttctacatccaggaactggtcctgccgggccaacggccc
ggcgaccccgccaacgacgtcagcccggcgctggccgaattcaagcggctgggcatcgac
gtggtgcagttgccccgggcaaccggccccacgacgggcaacatcaacatcgactacgaa
tccggcaggcagttgctgatgggcaatgccacgcgtccgtaccaaggctcggaaggccct
gcccacgagccctataccatcgcggtgtgccacgtgcagagcctggcttccaaggacggc
ttcacgcaacccatcgtggtcgacgctatcgccgggccgggacagggtggtgcggtcatt
cccctcgtcgatggcaccggcaccggctatttcctgtggcatggcatcgataacgacccc
tggttcatcgacgcggagttttcctacgtcgatgagaagggcaagtcacggacggtcaag
ttccccgtcgaacgcctgcggccctggcccaacgatccgaagatgcccaacgcctgcgcc
acgattctggcacgcatgaacgacttcacgcccacggtggtgaagggctcgctggctgtc
aaggtctacgtgatgaccggcgccgcggcgggcgtggcgtactcgggcggcaacctgatc
gcggtggccacgtacgatccctgggatcgcaccgacacgggctaccagttggaaacgctg
gtgcacgaactgggccacgccatcggcatgacccccagcggccccaactgggccagcgac
cccaatgcctgggaagacttcgacgagtcgaagctggaccgcattccgaacttctacagc
gaagcgggcaaccactgccattacggtcagcctaagatggcggagtcggattacgtccag
cacacgggtgactgcgtgatgtatggcggcgacacgaccagcatcaagttctgccccgac
tgctccaagggcgtgcgcaaggtcgacctctccaagggatggctccgcttcaagctatga
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integrated database retrieval system
