Orrella dioscoreae: ODI_R1181
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Entry
ODI_R1181 CDS
T05133
Name
(GenBank) RNA polymerase sigma-70 factor, ECF subfamily
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
odi
Orrella dioscoreae
Pathway
odi02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
odi00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
ODI_R1181
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
odi03021
]
ODI_R1181
Transcription machinery [BR:
odi03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
ODI_R1181
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4_2
HTH_23
Sigma70_r4
HTH_29
FaeA
MerR
HTH_17
HTH_28
HTH_24
HTH_11
Motif
Other DBs
NCBI-ProteinID:
SOE48015
UniProt:
A0A1C3JYJ5
LinkDB
All DBs
Position
I:complement(1290542..1291084)
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AA seq
180 aa
AA seq
DB search
MSASDSSSQGIAQLYGAHHRWLFGWLHRRLGNAADAAELAHDAFVRLLVTPRHFDTAPQA
RVYLRSMANGMCVDFWRRRSVEQAWLDALARQPPQFAPSAEHQALVLDALHEVDAMLREL
PRKAASAFVLAVACEMTDREVADALGVSSRMVRKYVARAMLGCMMLEAAQDARDAAPALS
NT seq
543 nt
NT seq
+upstream
nt +downstream
nt
gtgagcgcctccgactcctcctcgcaaggcatcgcgcagctgtatggcgcgcatcaccgc
tggctgttcggctggctgcaccggcggctgggcaacgcggcggacgcggccgagctggcg
cacgatgccttcgtgcggctgctcgtgacgcctcgccatttcgacactgccccacaggcg
cgcgtgtatctgcgcagcatggccaacggcatgtgcgtggacttctggcgccgccgcagc
gtggagcaggcctggctggatgccctggcccggcagccgccgcagttcgcgccctcggcg
gaacaccaggcgctggtgctggatgccttgcacgaggtcgatgccatgctgcgggaactg
ccccggaaagccgccagcgccttcgtcctggcggttgcctgcgagatgacggaccgggaa
gtggccgacgcactgggggtgtcgtcacgcatggtgcgcaaatacgtggcgcgcgccatg
ctgggctgcatgatgctggaagccgcccaggacgcgcgcgacgccgcgcccgccctgtcg
tga
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