Orrella dioscoreae: ODI_R1277
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Entry
ODI_R1277 CDS
T05133
Name
(GenBank) Filamentous haemagglutinin family outer membrane protein associated with VreARI signalling system
Organism
odi
Orrella dioscoreae
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF3739
CdiA_helical
Motif
Other DBs
NCBI-ProteinID:
SOE48167
UniProt:
A0A1C3K7M0
LinkDB
All DBs
Position
I:1390375..1399560
Genome browser
AA seq
3061 aa
AA seq
DB search
MGARTGFSTLPIEEGGNEADARASQRAIWLGEHAVVDVSAASHVELDPAARPYGQLLAGG
RIVVGGEVLEAGSRAPASDAFIVIRPGAVLDASGGAAVLDLDGRGARTLYSDGGDISLVS
GRGLYLDGVMRAHAGGEGAAGGRLTVGLDVPAYLRAAENAVRLPRELVLSQTRGVASDTL
PSALVYGQGALGVDQVQAGGFDGLTLFSQGLVSVAGSLDLTMPGELRIYSGAFAKPQDAA
AQLQVRLAAPYVLLSGITDTNSPADTHIRPVVDGSPDTAAGSGPTDGQLLVSGNHIDIKG
SVSLGVKTTLPLQTGTLAVEREGFARTELRSEGDIRFLEGAPVNTFTAQLLSAGDVMMTA
RQVYPATHVQARVVAGRTASGLNPEAELRIAHVGDASSPAQPYSVFGGLTLRAANIYQGG
VLRAPLGTLTLGTAQDVLNVVLAPGSETSVSAMGLVMPYGGTMDGVSYRYRDADITPQGV
GSTLQGAVILAGRSIAVQPGAILDLSGGGELTGAGFVSGRGGSTDARLNPMIRLTGTGFD
LPGLDTNPVYALVPGYAAPYTPAWDGVGAIDPAVGRQVVIGAGVPGLPAGTYTLLPSQYS
LLPGAFRVERNGGQLAGVSRQSVRLRNGSFVVAGVQRTANTDNVAGLAEQWIVTPADVVR
RMSQYNETGYSDFLRNQAALQGIPRALLPEDGKSLWLRLVAASGSDFSFQGEARFTPAKG
GYGGTATVSPLANQGSVEIVGAGAGATTGFNGLTLRASDLTAIGAPRLAVGGRIAVSFHG
EQSNGTNESNYLDFSISAANIVLRSGAVLRAPEVFLATNTATGGITVEDGAGIISIGAGA
VPYGSEQGYVYRPGPASVLAVSNAWLDVLAPEPDATAPVRGAGAIRIGTCTVSCHAGSQL
YSEGTILAATTRAFEMADTARYGTRNLVLAVSTVNAGERAALEDAAARGVLTPGLSLNQG
LLDRLLQGDQAHGAPALERLVLTAGQSFNLFGNVALTTRDPITGRSTLDNLVLSTPAIYG
HGQAGDIATISTGTLTWAALSGAAPAPIQGGRGTGSGSLRIAADVIEMGYGPNTQPNGID
DYARLVLGFQGVEFQAAQRFTANHKGSLAVYARQSGVDEQGPQYEGGNLTLTTPLVTGEG
GSVNRLKAGAALVLRGAGATAAPAATIASGAELALEGGTVTVDTRIAMPSGKVSMKSQGD
LRLLDGAQLDLAGRRVDVHDASYYGWGGDVVLESVAGNILQSAGSLIDVSAQYNHAGLIS
AFALDASAGRVSLGGALRGTTVGTHDAGGTWVPHRSGGVDIRAQHIGEGGSLSEAFADVN
ARLTAGGFLDERKFQLKQGDLSIGDELAGRVVDVSLDAGHLTVAGRIDASGSQVGTIRLA
GKQGLTIASTAMLDAHGTVLRLDSYGQVIDAANRAVIDLNAGDGLLTLAGGARMDLRHGT
ADARVQADPSLHDAVARGQLSLYAPRVSETGGDILVDASNSIDIQGARSIALYAMQRYDD
SDPALVQRWRHGGATPRLDANNQADDEAYREINQAYLDAKHDRSVAFINAALGNSTLTQQ
KLAGLNNNRYRDAFHLRPGVEITSEGALVVTGDLDISRHRYASLNPTVRPYVAGAAATNP
AYGGGEAGALTVRAQEGLEILGSINDGFAPAPTTPDDSGWVLVPGVQPFGGDVRIPIGGV
QLADGTVYPKGKTLNYAVTARNVALPVGTLLPVAVTLGAPLTLPEGTALAANVLASDGSV
LLAAGASVSAGGLVLPAGAQFLAGSRLPAAVTVARLTWPLGVPLPVNLVQDGAMTLPLGA
LLPAGVDVKLASGTIAVTLRAAGGTRNWALSQMLAEGSQSWDVRLVAGADRLAADSRRVL
PGRAGRMVFADTHYSAQVVIEPGRNEPERWVWNQGAGYVPPGGTAHPARATPGGTVTVAI
DRTRCISGVYSCTLMPAEVIPERVTAVDAKAPALSVVRTGTGDLDLISSGDVSMQSPYGI
YTAGTPTSLGSAAMDALFNQPRGKAAGGASVLGAGAGAQAAAYESLVSGSTSAYRAWYPE
YGGNFFLEAGGNVSGDAWGASNQLNTDSTGVGNWLWRQGTGASAGVNSQPTAWWINFGTY
VADPQFQAVLGGVTTPFWPAQTGFTGMGTLGGGNLSLRVGGDAGLISSRSANVATAAQVK
SQTPRSQGLVLAVGSSGRVLPDGELVFTGGGDLDLRVSGGWNAGVDARLRKQNGSVAQAH
SLYGAVVNLRGATQVSAGQIGLMERIYGGRAGQRDPRETRATDPYTSSMTLSTGGLMLVT
GDSAASLTSRGDLVLGGTGDPGRARTGNYQAYSGERNGQAGLSWFTLWTPNTSVQALSVG
GSLASDTRVSEFGVDRTGLYSAAGGWFMLPGAVNLAAPEGNVYLGQSSSYQNAASGFVLQ
APIGPRALSIAAGDSLYASGLPISQSGADERIMATIFQPAFAGFTEGAELGGVRFSNTSN
SAAVVSAGALPMLVFGLNTVGQTVGLSDSPSQPVRFYAGTGDLVGVRTGAQARYATNGMA
RLGEVDYIGANPVWMLAGRDIVNTGTLQGENPLALPSQVGGGTSSAGPAFNGNLFVHGHA
NDVSVVQAGRDILYHNLMVAGPGTLDITAGRNIVQEDRASLTSLGPIVAGDSRRGASIVL
QAGMGAQGANWNGFLARYLDPDNRIQTGLPLAGQAGRVVKTYESELIDWLAVHHGFVAPT
DGSVIEAARALFMSLPSAQQRVFARQVYFAELREGGREYNDADGPRFGSYLRGRNAIATL
FPETNDAGEAIVYRGDLLMHGGAGIHTNVGGDIQILTPGGSQTYGVEGAQPPGTAGLITR
GQGNIQLYSLGSILLGQSRVMTTFGGDILAWSAQGDINAGRGSKTTVVFTPPRRVYDSVG
NVSISPDVPSTGAGIATLNPLPEVVPGDVDLIAPLGTIDAGEAGIRVSGNVNIAALQVVN
AANIQVQGDATGIPVVAAVNVGALTNASAAASSAADAAQDTVARSRAAARQALPSIISVQ
ILGFGAEGGATDDVSPPPPARSSSVQPVSYNPSSTIQLVGNGQLSDAERTQLTAKERANA
L
NT seq
9186 nt
NT seq
+upstream
nt +downstream
nt
atgggggcgcgtaccggtttttccacgttgcccattgaagagggggggaacgaggcagac
gcccgtgccagccagcgtgcgatctggctaggtgagcatgccgtcgtggatgtgtcggcg
gcaagccacgtcgaattggatcccgcagcccgcccgtatgggcagctcctggcgggcggt
cgtatcgtggtgggcggggaagtgctggaggcgggcagccgtgcgcccgcttccgatgcc
ttcatcgtgatccgccccggtgcggtgctggatgcctcgggaggtgccgccgtcctggac
ctggatggcaggggcgcccggacgctttactctgatggcggcgacatctcgctggtgtcg
ggccgtggcctttacctggatggcgtcatgcgcgcccatgcgggtggcgagggcgctgcg
ggtgggcgactcacagtcgggctggatgtgcctgcctatctgcgtgcagcggaaaacgcg
gtccggcttcctcgggagctggtgctgagccaaacgcgaggtgttgcgtcagataccctg
ccctcggcgttggtgtatgggcagggtgcgcttggtgtggatcaggtgcaggccggtggg
ttcgatggcttgacgctcttcagccaaggcttggtcagcgtggccggctccctggacctg
accatgccaggagagctccggatctattccggtgcgtttgccaagccccaggacgccgct
gcgcagttgcaggtccgcctggccgcgccttatgtgttgttgtccggtatcacggatacg
aactctcccgcagatacccacatccgtcccgtggtggacggcagccccgacacggcggca
gggtcggggccaacggatggccaactgctggtatcgggcaatcatatcgatatcaagggc
agcgtcagcctgggcgtcaagacgacattgccgctccagactggcactttggcggtcgag
cgcgagggattcgcgcgcaccgagttgcgcagcgagggagatatccgcttcctggaaggc
gcgccggtcaacacgtttaccgcccagttgctgtcggctggcgatgtcatgatgacggcg
cgccaggtctatccggccacgcatgtgcaggcccgcgtcgtggcgggtcgcacggcctcg
ggattgaatcccgaggcggaactgcgtattgcacatgtcggagacgcgtcgtcgcccgca
cagccttattctgttttcggcggcctgacgcttcgagccgcgaatatctatcagggcggt
gtcttgcgcgccccattggggacgctgacgctgggcactgcccaggatgtgctgaacgtc
gtgcttgcgcccggcagcgaaacgtcggtcagcgcaatgggcctggtcatgccttacggc
ggcacgatggacggcgtcagctatcgctatcgtgatgcggatatcacgccgcagggtgtc
ggcagtacgcttcaaggtgccgtgatccttgcgggccgatccatcgctgtccagccaggc
gctattcttgatttgtcggggggcggcgaactgaccggcgcggggttcgtgtctgggcgc
ggtgggtcgactgatgccagattgaatccgatgattcgcctgacaggcacgggctttgat
ctgcccggcctggataccaaccccgtttatgccctggtgcccggctatgctgccccctac
acccccgcatgggatggtgtcggcgcgatagacccagcggtaggaaggcaggttgtgatc
ggtgcgggcgtgcccggattgcccgccggaacctatacgctgttgccttcccaatattcg
ctactgccaggcgctttccgtgtggaacgcaacggagggcaactggctggcgtttctcgg
caaagcgtgcgcttgcgcaacggttcttttgtcgtggctggcgtgcaacggacggcgaat
acagacaacgtcgctggtttggctgaacagtggatcgtcacgccagccgatgtcgtcagg
cggatgtctcagtacaacgaaaccggctattcggatttcctgcgcaaccaagcggcgttg
caaggtattccccgggcactgttgcctgaagatggaaaatccttgtggttgcgcctggtc
gccgcgtctggcagcgactttagcttccagggggaggcgcgcttcacgcctgccaaggga
ggatatggcggcacggccacggtgtccccgttggcgaaccaaggcagcgtcgagattgtc
ggcgcaggcgcaggtgctacgaccggcttcaatggcttgacactgcgtgcgtcggacctg
actgccatcggtgcgccacgcttggccgtgggtggtcggattgccgtgagtttccatggg
gaacagagcaacggcaccaacgaaagcaattatttggacttctcgattagcgcggccaat
atcgttctgcgtagtggtgccgtcttgcgtgcgcctgaagtattcctggccacgaacacg
gccaccggtggcatcaccgtcgaggatggagcgggcattatctcgattggggccggtgca
gtgccctacgggtctgagcaggggtacgtgtatcggccgggccctgccagcgttctcgct
gtgtcaaatgcctggctggatgtcctggcgccagagcccgatgcaacggcgccagttcgc
ggcgcgggtgcgattcgcattggaacgtgcacggtaagttgccatgcgggcagccaactc
tattccgaaggcaccattctcgcggcaaccacgcgtgccttcgagatggcggataccgcc
cgttatggcacgcggaacttggtgctggcggtgtccaccgtcaacgcaggcgaacgcgcc
gcattggaagatgcagcggcacggggggtattgacgcccggtctgagcctgaatcaggga
ttgctcgatcgcttgctgcagggagaccaagcgcatggcgcgcctgcattggaacgactt
gtcttgacggccgggcagtctttcaatctgtttgggaacgtcgcgctgaccacacgagat
cccatcaccggtcgctcgacgctggacaatttggtcctttccaccccagccatttatggt
catggtcaagctggcgatatcgccacgatttcgacaggcacgctgacctgggcggcattg
tcaggcgctgcgcctgcccctatccagggcggccgggggacgggcagtggtagcttgcgc
atcgcggcggacgtgatcgaaatgggctatggccccaacacccagcccaacggcattgac
gactatgcacggcttgtcctcggttttcagggtgtcgagttccaggccgcgcaacgcttt
accgccaatcacaagggcagtcttgctgtttatgcacgccagtctggtgtggatgagcag
ggaccgcagtatgaggggggcaacctgactttgacgacacctctggtgaccggcgaaggc
gggtcggtcaatcgcttgaaggcgggtgcggcgttggtgctgcgcggggccggggctaca
gcagcaccggccgcaacgattgcctcgggcgccgagttggccttggaaggaggaacggtc
acggttgatacccgcatcgccatgcccagcggcaaggtttcaatgaagtcacaaggcgat
ttgcgcctgctggatggcgctcaactcgatctggctggtcgccgcgtcgacgtccatgat
gcgagctattacggttggggcggcgatgtggtgcttgaaagcgtggcgggcaatattctg
cagtccgctggatcgctcattgacgtgtcagcccaatataaccatgcaggtttgatttcg
gcatttgcgctggacgccagcgcgggtcgggtgagtttgggtggggctctgcgtgggacc
accgtgggaacgcatgacgcgggcggcacctgggtgccgcaccggtcgggtggcgttgat
attcgcgctcaacatataggggagggcggctcgctgagcgaggcgttcgcggacgtcaat
gcacgcttgaccgctggtggtttcctggatgagcggaagttccagttgaagcagggcgac
ctttctatcggggatgagcttgccgggcgtgtggtcgatgtgtccctggatgctggccat
ctgacagttgcgggccgcatcgatgccagcggttcccaagtcggcaccatccggctggca
ggcaagcaagggctgacaattgccagcaccgccatgctggatgcgcatggcacggtgttg
cgactggatagctacggccaagtgatcgacgctgccaatcgcgccgtgattgacttgaat
gcgggtgatggattgctgacattggcgggtggcgcgcgcatggatctgcggcacggcacg
gctgacgcgcgggtgcaagcagacccgagcttgcatgatgctgttgcacggggccagctc
agtctgtatgcgccgcgtgtcagcgagacgggcggcgacatattggtggatgcgagcaac
tctatcgatatccaaggcgcccgctccattgcgctttatgcaatgcagcgatatgacgat
tcggatcctgcgctggtccagcgttggcgccacggcggggccacgccacgccttgatgcc
aacaatcaggcggatgacgaggcctatcgtgagatcaaccaggcttatctggacgccaaa
catgatcgcagcgtagctttcatcaatgccgctttgggtaatagcacgttgacacagcag
aagctcgctggtcttaacaacaaccgttaccgtgatgccttccatctacgtcccggcgtc
gagatcaccagcgagggtgcgctggtcgtgacgggtgacctggatatttcccggcatcgt
tatgccagcctgaatccgacggttcgtccgtatgtcgctggcgcagcggcgacgaatccc
gcctacggcggaggggaagcgggtgcgctgaccgttcgtgcgcaggaaggtctggagatt
cttggcagcatcaatgatggatttgcacctgctccgacaacgcccgacgatagtggctgg
gtgcttgttccgggtgtgcagccttttggcggtgatgtccgtatccctatcggtggtgtg
caacttgctgatggcacggtctatcccaagggcaagacgctcaactatgccgttacggca
cgtaatgtcgcgcttcctgtcgggacgttgctgccggtcgcggtcaccttgggcgcgccg
ctgactttgccggagggaaccgcgttggcggccaatgtcttggcctccgatggatccgtg
ttgctggcagcaggcgcatcggtatccgctggcgggctcgtcttgccggcgggcgcgcag
ttcctggcaggcagccggctgcctgcggccgtgaccgtggctcgtctaacttggcctctg
ggcgtccccctgcccgtcaatttggtccaggatggtgcgatgacgctccccctgggagcg
ctgctgcctgcgggtgtggacgtcaaattggccagtggaaccatcgccgtgacgttgcga
gcagcgggtgggaccaggaattgggcactctcgcaaatgttggccgaggggtcgcaatca
tgggatgtccgcctggtggccggcgctgacaggctcgccgcagacagccgtcgcgtcttg
cccggcagggctggcaggatggtttttgccgacacgcattattccgcacaagtcgtcatc
gagcccggacgtaacgagcctgaacgatgggtctggaaccagggggcaggatatgtaccg
cccgggggcacggcgcatcccgcccgggcgacgcctgggggcacggtcaccgtggcgatc
gaccgtacccgatgcatttcgggcgtgtattcgtgcacgctgatgcctgccgaagtcatc
cccgagcgcgtgaccgcggtagatgccaaggcacctgccctgagcgtcgtgcgcaccggt
acgggtgatctcgatctcatctcctcgggcgatgtctcgatgcagtctccgtacggcatt
tacaccgctggtactcccacctcgttggggagtgctgcaatggatgccttgttcaatcag
cctcgtggcaaagcggctgggggcgcgtcggtattgggagcgggggcgggagctcaggct
gccgcgtatgagagcttggtcagtggtagcaccagtgcctaccgtgcctggtatccagaa
tacggcggcaacttcttccttgaggcagggggcaatgtctcgggagatgcatggggtgca
agcaatcagctcaacactgacagcactggtgttggcaattggttgtggcgtcagggaacg
ggcgccagtgccggtgtgaacagccaacccacggcgtggtggatcaatttcggtacttac
gtggccgatccacagttccaagccgtactgggcggcgtgacgacgcctttctggccagcg
caaacaggctttacgggtatgggcaccctgggtggtggaaacctgtccctacgtgttgga
ggagatgcaggattgatctcctcgcgctccgccaatgtggcgactgccgctcaagtcaag
tcgcagacaccgcgctcccaagggttggtgcttgccgtaggtagctcgggccgggtgttg
ccggacggggagttggtattcacgggaggaggggatctcgacttgcgcgtgtcaggagga
tggaacgccggagtcgatgcacgcttgcgtaagcaaaacggttcagtcgcccaggcgcac
tccttgtacggcgccgtggtgaaccttcggggggccacacaggtttctgcgggccaaatt
ggtcttatggagcgtatctatggcgggcgtgcaggccaacgagatcctcgagagacccgt
gcaaccgatccctacacctcaagcatgacgctttccaccggaggcctgatgttggtcact
ggggattcagccgcgtcgctgactagccgcggggacctggtgctgggtggcacaggagac
ccgggccgggcacggacaggcaactatcaagcttattcaggggagcgcaacggacaggcc
ggcttgagttggttcacgttgtggacgcccaacacttcggtgcaggcgctctccgtggga
ggcagtcttgcctctgatacgcgagtcagcgagttcggtgtggatcgtacgggcctctac
tctgcggcgggaggctggttcatgttgcctggcgcggtcaacctagctgcacctgaaggc
aacgtctatctgggccagtcatcctcttatcagaatgcggccagtggttttgtgctgcaa
gcgccgatcgggcctcgcgctctgtcaattgcggcgggtgattctctatatgcgagtggt
ttgcccatcagccagtccggcgccgatgagcggatcatggccacgattttccagccggca
tttgctggattcacggagggggcagagctcgggggggtgcgcttcagcaatacttccaac
agtgctgcggtggttagcgctggtgcgctacccatgctggtatttggcttgaatactgtg
gggcagactgtcggactgtctgactcgccttcccagcctgtgcggttctacgcgggcaca
ggagatttggtgggcgtcaggacaggcgcgcaggcgcgttacgcaacaaatggaatggca
cgcttgggagaggtcgactacatcggtgcaaatcctgtgtggatgctggccgggcgtgac
atcgtgaatacaggtacgttgcagggtgagaacccgctggctctgccgtcgcaagtggga
gggggaacgtcaagcgccgggcctgcctttaacggcaatctgtttgtgcatggtcatgca
aacgacgtgtcggtggttcaggccggaagagacattctttatcacaacttgatggtggca
ggtcctggaacgctcgacatcaccgccgggcgcaatatcgttcaggaagatcgagccagc
ttgaccagcttggggcccatcgtcgcgggcgacagtcgccggggcgccagcatagtcttg
caggctggcatgggtgcgcagggagccaactggaacggattcctggctcgctatcttgat
cctgataaccggatccagaccggtttgccgttggctggccaagctggccgcgtggtgaag
acctacgagagtgaattgatcgactggttggctgtgcatcacggttttgttgcgccaacc
gatggttcggtgatcgaggctgcccgtgcgctattcatgagtctgccttccgctcagcag
cgcgtttttgcaaggcaggtctattttgcagagctgcgtgagggagggcgtgaatacaac
gacgccgacggcccacgtttcggtagttacctgcgtggccgtaatgccatcgcgaccttg
ttccccgagacaaatgacgccggcgaggcaatcgtgtatcgaggcgaccttttgatgcat
ggcggtgctggcattcacaccaatgtgggcggcgatattcaaatcttgacgccgggtggt
tcgcaaacctacggtgtagagggggcgcaacctcctggaacggcggggctcatcacgcga
ggccaagggaacattcagctttattccctgggaagcatcctgttgggccaaagccgtgtc
atgacgactttcggtggggatattctggcctggtcggcgcaaggcgatatcaacgcgggc
cggggcagcaagacgacagtggtgttcacccccccgcgtcgggtctacgacagtgtgggg
aacgtctcgatttcgcctgatgttcccagcacgggggcaggtatcgcaacgctgaatccg
cttccagaggtggtgccaggtgacgtcgacttgatagcgccattgggcacgattgatgcg
ggagaggcaggaattcgcgtgtccggtaacgtgaatatcgcggccttgcaggtcgttaat
gctgccaacatccaagttcaaggtgatgcaaccggaattcctgtggttgccgccgtcaat
gttggtgcgctgacgaatgcgagtgcggcagccagttctgctgcagatgccgcgcaagat
accgttgcccgctcgcgtgcggctgcgcgtcaggccttaccctccatcatcagtgtccag
attttgggttttggtgcggaaggtggcgctacggatgacgtctctccaccgccgcccgct
cgctcctcgtcggtgcagccggtcagctacaatccgagcagcacgattcagcttgtgggg
aatggtcagctttccgatgcggaacgtacgcaactgactgcgaaggagcgtgcaaacgct
ttgtaa
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