Orrella dioscoreae: ODI_R1436
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Entry
ODI_R1436 CDS
T05133
Name
(GenBank) Ribonuclease III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
odi
Orrella dioscoreae
Pathway
odi03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
odi00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
ODI_R1436
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
odi03019
]
ODI_R1436
03009 Ribosome biogenesis [BR:
odi03009
]
ODI_R1436
03036 Chromosome and associated proteins [BR:
odi03036
]
ODI_R1436
Enzymes [BR:
odi01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
ODI_R1436
Messenger RNA biogenesis [BR:
odi03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
ODI_R1436
Ribosome biogenesis [BR:
odi03009
]
Eukaryotic type
90S particles
RNase
ODI_R1436
Prokaryotic type
rRNA processing factors
ODI_R1436
Chromosome and associated proteins [BR:
odi03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
ODI_R1436
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
RM44_endonuclase
DND1_DSRM
Motif
Other DBs
NCBI-ProteinID:
SOE48428
UniProt:
A0A1C3K454
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All DBs
Position
I:1566202..1566960
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AA seq
252 aa
AA seq
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MSLATLANRLDYQFADAGLLEQALTHRSHGARHNERLEFLGDSVLNFVVAAMLFERYARI
DEGDLSRLRANLVKQASLADIAQKLDLSQYLRLGEGELKSGGFRRPSILADTLEAIFGAV
FLDGGFDQARRVIVRQYQPILANVDPQTLGKDAKTLLQEFLQGRKMALPIYTVIATHGAA
HSQQFEVECAIPAFEIKVVAPGSSRRAAEQSAAKLALEAAEAASPTPLKRRAGKARKTTQ
LTLPVAVAQDTK
NT seq
759 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcttgcaacgcttgcaaaccgcctggactaccaattcgccgatgccggcctgctc
gagcaggcgctcacgcatcgcagccacggcgcgcgacacaacgagcggctggaattcctg
ggtgattcggtcctgaacttcgtcgtggctgccatgctcttcgagcgctatgcccgcatc
gatgaaggcgacctgtcgcgcctgcgcgccaatctggtcaagcaggcttccctggcggac
atcgcccagaagctggacctgtcccaatacctgcgcctgggcgagggcgagctgaaaagc
ggcggattccgtcggccctccatcctcgccgacaccctcgaggccattttcggcgcggtg
ttcctggatggcggtttcgaccaggcccgccgcgtcatcgtgcgccaataccagcccatc
ctggccaacgtcgatccgcagaccctgggcaaggacgccaagaccttgctgcaggagttc
ctgcaggggcgcaagatggccttgcccatctataccgtcattgccacgcacggcgcggcg
cacagccagcaattcgaggtcgagtgcgccattcccgcattcgagatcaaggtcgtggcg
cccggcagcagccgccgcgcggccgagcagtccgccgccaagctggcgctggaggctgcc
gaggccgccagccccactcccctgaagcgccgcgccggcaaggcgcgcaagaccacgcaa
ctgaccctgcccgtggcagtggcgcaagacaccaaatga
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