Orrella dioscoreae: ODI_R1568
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Entry
ODI_R1568 CDS
T05133
Name
(GenBank) Transcription termination protein NusA
KO
K02600
transcription termination/antitermination protein NusA
Organism
odi
Orrella dioscoreae
Brite
KEGG Orthology (KO) [BR:
odi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
odi03021
]
ODI_R1568
03009 Ribosome biogenesis [BR:
odi03009
]
ODI_R1568
Transcription machinery [BR:
odi03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
ODI_R1568
Ribosome biogenesis [BR:
odi03009
]
Prokaryotic type
rRNA transcription factors
ODI_R1568
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NusA_N
KH_5
HHH_5
S1
KH_NusA_C
S1_2
KH_2
Motif
Other DBs
NCBI-ProteinID:
SOE48653
UniProt:
A0A1C3K8A1
LinkDB
All DBs
Position
I:1700769..1702262
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AA seq
497 aa
AA seq
DB search
MSREILLLVDALAREKNVARDVVFEALEGALASAMKKRFKDDADIRVAIDRNSGDHEGFR
RWLVVPDEAGLQEPDREELFSEAEEIVPGIQVGEYIEEPLEPVEFGRIGAQAAKQAILQK
IRDAEREQVLNDFLDRGETIVSGTVKRMDKGDYIIETGKIEARLPRQEMIPKENLRVGDR
VRAFVLKVDHTLRGQQVILSRTSPDFIRQLFENEVPEIEQGLLEIKAAARDAGVRAKIAV
IAYDKRIDPIGTCVGMRGSRVTAVRNELGGEQVDIVLWSEDPAQFVIGALAPANVESIVV
DEDKHAMDVVVDEENLPKAIGAKGQNVRLASELTGWQINIMTPEESLNRQESERANLRAT
FMSKLDVDEEVADILIDEGFTGLEEIAYVPMQELLEIEAFDEDTINELRTRARNALLTEA
IAQEELKETAQDLLSLEGVTPELVAKLAENGVSTRDDLAELASDELAELAGVSDDEASEL
IMRARAHWFEDDKPAGA
NT seq
1494 nt
NT seq
+upstream
nt +downstream
nt
atgagtcgcgaaattcttctgttggtcgacgcgctggcgcgtgaaaagaacgtggcgcgt
gacgtggtcttcgaggcgctggaaggcgccttggcctcggccatgaaaaagcgtttcaag
gacgacgcggacatccgcgtcgcgatcgaccgcaactccggtgaccacgaagggttccgc
cgctggctggtcgtgcccgacgaggccggcctgcaggagccggatcgcgaagagctgttc
tcggaagccgaggaaatcgtccccggcatccaggtcggtgaatacatcgaagagccgctc
gagccggtggagttcggccgcatcggcgcccaggcggccaagcaggcgatcctgcagaag
atccgcgatgccgagcgcgagcaggtgttgaacgacttcctcgatcgtggcgagaccatc
gtgtccggcacggtcaagcgcatggacaagggcgactacatcatcgagacgggcaagatc
gaagcccgcctgccgcgccaggaaatgatcccgaaggaaaacctgcgggtcggcgaccgc
gtgcgggctttcgtgctgaaagtcgaccacaccctgcgcggccagcaggtcatcctgtcg
cgcacctcgcccgacttcatccgccagctgttcgagaacgaagtgcccgagatcgagcag
ggcctgctcgagatcaaggctgctgcccgtgatgcaggcgtgcgcgccaagatcgccgtc
atcgcctatgacaagcgcatcgacccgatcggcacctgcgtcggcatgcgcggttcgcgc
gtcaccgccgtgcgcaacgagctgggcggcgaacaggtcgacatcgtgctgtggtcggaa
gatcccgcgcagttcgtcatcggcgcgctggccccggccaacgtcgagtccatcgtggtc
gatgaagacaagcacgcgatggacgtggtggtcgacgaggaaaacctgcccaaggccatc
ggtgccaagggccagaacgtgcgcctggcgtccgagctgaccggctggcagatcaacatc
atgacgccggaagaaagcctgaaccgccaggagtccgagcgcgccaacctgcgtgccacg
ttcatgagcaagctggacgtggacgaggaagtcgccgacatcctgatcgacgaaggcttc
acgggcctggaagaaatcgcctacgtgcccatgcaggaactgctcgagatcgaagccttc
gacgaagacacgatcaacgagctgcgcacccgtgcgcgcaacgccctgctgaccgaggcg
atcgcccaggaagaactgaaggaaaccgcgcaagacctgctgagcctcgagggcgtgacg
cccgagctggtggcgaagctggccgagaacggcgtgagcacgcgtgatgacctggccgaa
ctggcgagcgacgaactggccgagctggccggcgtcagcgacgacgaggccagcgagctc
atcatgcgcgcccgtgcgcactggttcgaggacgacaagccggccggggcctga
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