Orrella dioscoreae: ODI_R1609
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Entry
ODI_R1609 CDS
T05133
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
odi
Orrella dioscoreae
Brite
KEGG Orthology (KO) [BR:
odi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
odi03400
]
ODI_R1609
DNA repair and recombination proteins [BR:
odi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
ODI_R1609
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
Zn_ribbon_LapB
DnaB_C
ChlI
AAA_22
GvpD_P-loop
DUF7125
AAA_16
Rad51
Lon_C
nSTAND3
AAA_24
AAA_14
RecA
AAA_5
AAA_29
SLFN-g3_helicase
ABC_tran
MCM
zf-RING_10
DnaJ_CXXCXGXG
PAXNEB
Motif
Other DBs
NCBI-ProteinID:
SOE48731
UniProt:
A0A1C3K7Z8
LinkDB
All DBs
Position
I:1746008..1747366
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AA seq
452 aa
AA seq
DB search
MAKTKTQFVCSECGGTSPKWQGKCPHCNAWNTLEETLEPSAAAGGHRYAPLAASTPVRTL
SEIEARELPRLPTGLEEFDRVLGGGLVAGGVVLIGGDPGIGKSTLLLQALVSMSGAARVL
YVTGEESAEQVALRARRLGVTSDNVDLLAEIRLESIQAALSEQKPAVAVIDSIQTVYSGE
LTAAPGSVSQVRECAAQLTRYAKQTGIPIVMIGHVTKDGTLAGPRVLEHIVDTVLYFEGD
THSSFRLVRAFKNRYGAVNELGVFAMTDRGLRGVANPSALFLSQHAQQVSGSCVMATQEG
TRPLLVEIQALVDSAHAPNPKRLTVGLEGNRLAMLLAVLHRHAGVATYDQDVFVNAVGGV
RIAEPAADLPVLLAIMSSLRDRPLPQGMIAFGEVGLAGEIRPAPRGQERLREAAKLGFNV
ALVPKANAPRQPIEGLEVWAVDRLDAALERLR
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atggccaagactaaaacgcagttcgtctgttccgagtgtggcggcacctcgccgaagtgg
cagggcaagtgcccgcattgcaacgcctggaacacgctcgaggaaaccctggaaccgtcg
gccgcggccggcgggcaccgctatgcgccgctggcggccagcacgcccgtgcgcacgctg
tccgagatcgaggcccgcgagttgccgcgcctgcccaccgggctggaagagttcgacagg
gtgctgggcggcggcctggtggcgggcggcgtggtgctcatcggcggcgatccgggcatc
ggcaagtccacgctgctgctgcaggcgctggtgtccatgtcgggcgcggcccgcgtgctc
tacgtcacgggcgaagagtccgccgagcaggtcgccttgcgcgcccgccggctgggcgtc
acctcggacaatgtcgacctgctggccgagatccggctggaatccatccaggcggcgctc
tccgagcagaagccggccgtggccgtcatcgattccatccagaccgtctattcgggcgaa
ctcaccgccgcgcccgggtcggtgtcgcaggtgcgcgagtgcgccgcgcagctcacccgc
tatgccaagcagaccggcatccccatcgtgatgatcggccacgtcaccaaggacggcacg
ctggccggtccgcgcgtgctcgagcacatcgtcgacacggtgctgtatttcgaaggcgac
acgcactcctctttccgcctggtgcgcgccttcaagaaccgctatggcgcggtcaacgag
ctgggcgtcttcgccatgaccgaccgcggcttgcgcggcgtggccaatccatcggcgctg
ttcctgtcgcagcatgcccagcaggtgtccggttcctgcgtgatggcgacgcaggagggc
acgcggcccctgctggtcgagatccaggccctggtggacagcgcgcatgcgcccaatccc
aagcgcctgaccgtggggctggagggcaaccgcctggccatgctgctggcggtgctgcac
cggcacgcgggcgtggccacctatgaccaggatgtcttcgtcaatgcggtgggcggcgtg
cgtatcgccgagcccgcggccgacctgccggtgctgctggccatcatgtcctccttgcgc
gaccggcccttgccccagggcatgatcgccttcggcgaagtcggcctggcgggcgagatc
cgccccgcgccacgcggccaggagcgcctgcgcgaggccgcgaagctgggcttcaacgtg
gcgctggtgcccaaggccaacgcgccgcgccagcccatcgaggggctggaggtctgggcg
gtggatcggctggatgcggcgctggagcgcttgcgctaa
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