Orrella dioscoreae: ODI_R1628
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Entry
ODI_R1628 CDS
T05133
Name
(GenBank) Fe(2+)/alpha-ketoglutarate-dependent dioxygenase LpxO
KO
K12979
beta-hydroxylase [EC:1.14.11.-]
Organism
odi
Orrella dioscoreae
Pathway
odi00540
Lipopolysaccharide biosynthesis
Brite
KEGG Orthology (KO) [BR:
odi00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
ODI_R1628
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
odi01005
]
ODI_R1628
Lipopolysaccharide biosynthesis proteins [BR:
odi01005
]
Lipid A
ODI_R1628
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Gene cluster
GFIT
Motif
Pfam:
Asp_Arg_Hydrox
Cupin_2
Motif
Other DBs
NCBI-ProteinID:
SOE48762
UniProt:
A0A1C3K5P1
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All DBs
Position
I:complement(1769116..1770015)
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AA seq
299 aa
AA seq
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MKWLIPGIWLAAILYGHLRGRVRLPFVRQLLDHSALLAPINALMVLNSKVPTTPYVAPAD
MPDLKVLDDNWEMIREEALAMAEAQHIKAAEKHDDIGFNSFFKYGWKRFYLKWYDARHPS
AEALCPRTVALLRQLPSVKAAMFAQLPPGGKLNAHRDPYAGSLRYHLGLVTPNDDRCYIE
VDGERYSWRDGDSVVFDETYIHSALNGTEQNRIILFCDIERPVRWGWVGALNRWFGKAVM
SAASSPNESGDKTGAINRLTHLHYRIDQKRRTFKKWNKTVYKATKWGLIALVVIGFIAL
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
atgaaatggctgattcccggaatctggctggccgccatcctgtatggccacctgcgtggg
cgcgtgcgcctgcccttcgtgcggcagttgctggatcattcggcgttgctggcgcccatc
aatgccttgatggtgctcaattccaaggtgccgaccacgccctacgtggcgccggccgac
atgcccgacctgaaggtgctggacgacaactgggaaatgatccgggaggaagccctggcc
atggccgaggcgcagcacatcaaggcggcggagaagcacgacgacatcggcttcaactcc
ttcttcaagtacggctggaagcgcttctacctgaagtggtatgacgctcgccacccttcc
gcggaagccctgtgcccgcgcaccgtggcgctactgcgccaattgccctccgtcaaggcg
gcgatgtttgcccagctgccgcccggcggcaagctcaatgcgcaccgcgacccctatgcc
ggatcgctgcgttaccacctgggcctggtcacgcccaacgacgaccgctgctacatcgag
gtcgacggcgagcgctacagctggcgcgacggcgacagcgtggtgttcgacgaaacctac
atccactcggcgctgaacggcaccgagcagaaccgcatcatcctcttctgcgacatcgag
cgtcccgtgcgctggggctgggtcggcgcgctgaaccgctggttcggcaaggcggtgatg
tcggcggccagctcgcccaacgaaagcggcgacaagacgggcgccatcaaccgcctgacg
cacctgcactaccgcatcgaccagaagcgccgtacgttcaagaagtggaacaagacggtc
tacaaggccaccaagtggggcctaatcgcgctggtggtgatcggcttcatcgcgctgtag
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