Orrella dioscoreae: ODI_R1629
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Entry
ODI_R1629 CDS
T05133
Name
(GenBank) DNA polymerase III alpha subunit
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
odi
Orrella dioscoreae
Pathway
odi03030
DNA replication
odi03430
Mismatch repair
odi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
odi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
ODI_R1629
03430 Mismatch repair
ODI_R1629
03440 Homologous recombination
ODI_R1629
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
odi03032
]
ODI_R1629
03400 DNA repair and recombination proteins [BR:
odi03400
]
ODI_R1629
Enzymes [BR:
odi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
ODI_R1629
DNA replication proteins [BR:
odi03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
ODI_R1629
DNA repair and recombination proteins [BR:
odi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
ODI_R1629
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DNA_pol_IIIA_C
tRNA_anti_2
Motif
Other DBs
NCBI-ProteinID:
SOE48765
UniProt:
A0A1C3K5C3
LinkDB
All DBs
Position
I:1770155..1773592
Genome browser
AA seq
1145 aa
AA seq
DB search
MVDGIVRISDLVKQAARLGQPAVALTDLANLFGLIKFYKAARGAGIKPIAGCDLWLTNED
DRDKPFRILLLVASREGYLNLCALLTQAWLTNQHRGRAELRREWLQGQAGLIMLSGGRAG
DIGQALEAGNMATAQVLARQWAQTFPGSFYIELQRSGHDGDEAYVQAAMRLAGECGLPVV
ATHPVQFLSREEFRAHEARVCIAEGEILSNPRRARRHTEDQYLLDSAEMARRFADVPSAL
ANSVEIAKRCNLTLVLGKPQLPNFPTPEGVTLDDYLVQLSREGLEVRLAQLFAEAAERDA
KRPEYLARLDWECKTIIQMGFPGYFLIVADFINWGKNNGVPVGPGRGSGAGSLVAYALGI
TDLDPIRYDLLFERFLNPERVSMPDFDIDFCQDNRERVIDYVKQKYGREAVSQIATFGTL
GAKAVVRDAGRVLDMPYTMCDQLSKLIPFNPADPWTLERTLANEPAFKERYEQEEEVRAL
VDLAKPLEGLTRNIGMHAGGVLIAPGKLTDFCPLYCQQGQENSAVSQYDKDDVEAAGLVK
FDFLGLRNLTILDWAVRFVRRFNADKRDFDVMALALDDPAAYKVLCDANTTAVFQLESRG
MKELLKKLRPSTFEDVIAVLALYRPGPLESGMVDDFVNRKHGRAAVDYFHPDLEGTLKST
YGVIVYQEQVMLISQIFGGYSLGGADLLRRAMGKKKPEEMAKHRELFQKGAQDKGHDPDL
AVQLFDLMEKFAGYGFNKSHSAAYALISYHTAWLKAYHPTEFLAATLSSDMDDTDKVQTF
WKDALANGITVLPPDVNHSNYRFEPVEDAHTAQGLPPRTMRYGLGAVKGTGQAAVEDILR
AREEGGPFKDLFDFCRRIDRHSVNRRTIEALIRAGAFDTILANRAALLASVPTAMEAAEQ
AARSANQVSLFGDFGDDGTDVVAGQLAKVQPWDLRTQLSEEKAALGFFFSGHLFDAWRDE
VRRFVPTPLARLEPARELQWMAGVLAGVRTMMTRRGKMLFAVLDDGSSQVEISVFNELFE
QNKTRLREDQLLIVQGKISNDEYSGGMRIVADTLHDLQLAREARARSLRITLNGNADAAE
LRRLLNPFRAEPENGFPGTPVEIYYARDDACGLLRLGEEWRVRMSETLIDQLNAWTQPYP
VEINY
NT seq
3438 nt
NT seq
+upstream
nt +downstream
nt
gtggtggacggcatcgtccgtatttccgatctggtcaagcaggccgcccgccttgggcag
ccggccgtggcgctgaccgacctcgccaacctgttcggattgatcaagttctacaaggcg
gcccgcggggcaggcatcaagccgatcgcgggctgcgacctgtggctgaccaacgaggat
gaccgggacaagcctttccgcatcctgttgctggtcgccagccgcgagggctatcttaac
ctgtgcgccctgctgacccaggcctggctgaccaaccagcatcgcggccgggccgagctg
cgccgcgaatggctgcaaggccaggccggcctcatcatgctgtccggcggccgggcgggc
gacatcggccaggcgctggaagccggcaacatggccaccgcgcaggtcctggcgcgccag
tgggcgcaaaccttccccggcagtttctacatcgagctgcagcgttcgggccacgacggc
gacgaagcctatgtccaggccgccatgcggctggcgggcgagtgcggcctgccggtggtc
gccacgcaccctgtgcagttcctgtcccgcgaagagttccgcgcccacgaggcgcgcgtc
tgtatcgcggaaggcgaaatcctcagcaacccgcgccgcgcgcgccgccacaccgaagac
cagtacctgctggactcggcggaaatggcccgccggttcgccgacgtgccgtcggcgctg
gccaacagcgtcgagatcgccaagcgctgcaacctgacgctggtgctgggcaagccccag
ttgcccaatttccccacgccggaaggcgtgacgctggacgattacctggtgcagctgtcg
cgcgagggcctggaagtgcgcctggcgcagctgttcgcggaagcggccgagcgcgacgcc
aagcgaccggaatacctggcgcggctggactgggagtgcaagaccatcatccagatgggc
ttcccgggctacttcctgatcgtggccgacttcatcaactggggcaagaacaatggcgtg
cccgtggggccgggccggggctcgggcgcgggctcgctggtggcctacgccttgggcatc
accgacctcgatcccatccgctatgacttgctgttcgagcgcttcctgaatccggagcgg
gtgtccatgcccgacttcgatatcgacttctgccaggacaaccgcgaacgcgtcatcgac
tacgtcaagcagaaatacgggcgcgaggccgtcagccagatcgccactttcggtacgctg
ggcgccaaggccgtggtccgcgacgcaggccgcgtgctggacatgccctacaccatgtgc
gaccagctctcgaagctgatccccttcaatcccgccgatccgtggaccctggagcgcacg
ctggccaacgagcctgccttcaaggagcgctacgagcaggaggaagaggtgcgggcgctg
gtcgacctggccaagccgctcgagggcttgacccgcaacatcggcatgcacgcgggcggc
gtgctgatcgcgcccggcaagctcaccgatttctgcccgctgtattgccagcaaggccag
gaaaacagcgcggtctcgcagtacgacaaggatgacgtcgaagctgccggcctggtgaag
ttcgacttcctgggcctgcgcaacctgaccatcctggattgggccgtgcgtttcgtgcgc
cgcttcaatgcggacaagcgcgacttcgacgtcatggcgctggcgctcgatgatccggcc
gcctacaaggtgctgtgcgacgcgaacaccaccgcggtgttccagctggaatcgcgcggc
atgaaggaactgctgaagaagctgcggcccagcacgttcgaagacgtcatcgccgtgctg
gcgctctaccgcccgggtccgctggagtcgggcatggtggacgacttcgtcaaccgcaag
cacggccgcgccgcggtggattacttccacccggacctggaagggacgttgaagagcacc
tacggggtcatcgtctaccaggaacaggtgatgctgatctcgcagatcttcggcggctac
tcgctgggcggcgccgacctgctgcgccgcgccatgggcaagaaaaagcccgaggaaatg
gccaagcaccgcgagctgttccagaagggcgcgcaggacaagggccatgaccccgacctg
gccgtccagctcttcgacctgatggagaagttcgccggctacggcttcaacaagtcgcac
tcggccgcctacgcgctcatctcgtatcacaccgcctggctcaaggcctaccacccgacc
gagttcctggccgccacgctgtcctccgacatggacgacaccgacaaggtccagaccttc
tggaaggatgcgctggccaacggcatcaccgtgctgccgcccgacgtcaaccattcgaac
taccgcttcgaaccggtggaggacgcgcacaccgcccagggcctgccgccgcgcaccatg
cgctatggcctgggcgcggtcaagggcacgggccaggccgcggtggaagacatcctgcgc
gcgcgggaggagggcggtccgttcaaggacctgttcgatttctgccggcgcatcgaccgt
cattcggtcaaccgccgcaccatcgaggcgctgatccgcgccggtgccttcgacaccatc
ctggccaaccgggccgccttgctggcctcggtgcccacggcgatggaagcggccgagcag
gccgcgcgcagcgccaaccaggtctcgctcttcggtgacttcggcgacgacggcacggac
gtggtggcggggcagctggccaaggtccagccctgggacctgcgcacccagctgtccgag
gaaaaggccgcgctgggcttcttcttcagcggccacctgttcgacgcctggcgcgacgag
gtccgccgcttcgtgcccacgccgctcgcgcgcctggaacccgcacgcgagctgcaatgg
atggcgggcgtgctggccggcgtgcgcaccatgatgacccgccgcggcaagatgctgttc
gcggtgctggacgacggctcctcccaggtcgagatctcggtcttcaacgagctgttcgag
cagaacaagacccgcctgcgtgaagaccagttgctgatcgtgcagggcaagatcagcaat
gatgaatactccggcggcatgcgcatcgtggccgacacgctgcacgacctgcagctggcg
cgcgaggcgcgggcgcggtccctgcgcatcacgctcaatggcaacgccgacgccgccgag
ctgcgccgcctgctgaaccccttccgcgccgaacccgagaatggtttcccgggaacgccg
gtggaaatctattacgcgcgggatgacgcatgcgggctgcttcgcctgggcgaggagtgg
cgcgtgcggatgtccgagacgctgatcgaccagctcaacgcctggacccagccttatcct
gtcgagatcaactactga
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