Orrella dioscoreae: ODI_R1861
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Entry
ODI_R1861 CDS
T05133
Name
(GenBank) lytic transglycosylase
Organism
odi
Orrella dioscoreae
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Gene cluster
GFIT
Motif
Pfam:
SLT
SLT_2
Surfac_D-trimer
Motif
Other DBs
NCBI-ProteinID:
SOE49131
UniProt:
A0A1C3K1Q6
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Position
I:2017610..2020078
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AA seq
822 aa
AA seq
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MAVDPRRLQAAREAARTPGQIFGDAEPGALSGSLSAIPQGVVTGVAQVEGVLAGAAAATI
QPVYDALETATGVTPWNPFASLRDQADVWAQQYRPDPLSTGMAGQVMFDVGRVLTQVGVG
AAATAATGGAGGSALLGGAVVAGGSTGRATALEMQERGADVSTAVNAGFIDALTVGGGVL
LPGAIGYQSLAAPLAATGAGLSRGAYYGANVAYGVGANVALGVAQRGATHDLLESGGYTA
MAKQYAPLDAAAITAEGVLGGVFSAIGARAGLPMRAGPTVDAALAARDAKHSAVDTSPGV
PADQETAGAHGRALDSAIRALLDGRPVDVSQTGAVDGQYIMGRRSQAVIDAARDEYGLDI
PASARYTPSTRLADLPSSQRTALRYDAPELNEYAAQVEQQYGLPAGLINGLKNAGERSNS
NQVSPAGASGVMQFMPENLRKYGVTDASDPVQMIDAAGRYLRDTMRQYGGDVDAVIADYN
GGPRQAREVLAGRQPKARETREYLARVRQWLGRDMPEAGQALPVARAAAGDVAEIPAIPA
ERARVASSIERELAAAEGERADLIAKAGGEAEIGQVTEIRAELVELQAQRADIGSDASLR
ELAKKIQATPRTSYKEALSQARRQRSAEIQALDGRIERLEGALSQNRTAAQAAQRLAVLD
DEIGNLQANRAAVQEPAALPTMTNVSVRSALGELGLSDPQTAPIDAGRPAGSNPMARAPA
PPRQAVARPARAEGEAAGSPARQEGDGGEARSNAQPFDDPETQAGLSLLDEQGDIVVPVQ
GADGETINVSLRQALADADAELQYGRPEAFNAAVVCAMTRGA
NT seq
2469 nt
NT seq
+upstream
nt +downstream
nt
atggccgtagatcctcgccgcctacaggcagccagagaggccgcgcgcacgccagggcag
atattcggtgatgcagagcccggcgctctgtccgggtcgctttcagcgatcccgcagggc
gtcgtcacgggcgttgcccaggtggaaggtgtattggctggcgcggcagcggccaccatt
caaccggtatacgacgcccttgagacggctacgggcgtgacaccctggaatcccttcgcc
tccctgcgcgaccaggctgatgtgtgggcacagcaataccgccccgatccactctcaacc
ggcatggcgggacaggtcatgttcgacgtcggcagggtgctgactcaggttggcgtcggc
gcggcagcgacagcggcgacgggcggcgccggcggttcggcgcttctgggcggggcggtt
gtcgccggcggctccacaggccgcgccaccgcgctggaaatgcaggagcgcggcgcggac
gtatccacggcggtgaacgccggattcattgatgcgctcaccgtgggcggcggcgtgctg
ctgcctggcgccatcggttatcaaagccttgcggccccgctggcagcgacaggggcgggg
ctgagccgtggcgcctactacggcgccaacgttgcctatggtgttggcgcgaacgtcgct
ttgggcgtggcgcagcgcggcgctacccatgacctgctggaatctggcgggtacacggcg
atggcgaagcagtatgcgccgctcgatgccgcggcaatcaccgccgagggtgtgctgggt
ggggtgttcagcgccattggcgccagggcaggcctgccgatgcgcgccggcccgaccgtg
gacgcagccctggcggcacgcgacgccaagcattcggctgtcgatacgtcgcctggcgtg
ccggcagaccaggaaacggcaggggcgcatggacgtgcgctcgacagtgccatccgtgcg
ctgctcgatggccgtcccgtggacgtatcccagacgggggcggtcgatggtcagtacatc
atgggccgtcgcagccaggcagtcattgatgctgcgcgagacgagtacggcctggatatt
ccggcgtctgctcgctatacgcccagcaccagactggctgatctcccgtcctcccagcgg
accgcgctgcgctatgacgccccggaactgaacgagtacgcagcccaggtcgagcagcaa
tacggactgccagcaggactcatcaacggcctgaagaacgccggggagcgcagcaacagc
aatcaggtcagcccggccggcgccagcggtgttatgcagttcatgccggagaacctgcgc
aagtacggcgtgacggatgccagcgaccccgtgcagatgatcgacgccgcagggcggtat
ctgcgtgacaccatgcgccagtatggcggcgatgtggatgcggtgatcgcggactacaac
ggcggcccgcgccaggcccgcgaggtgctggccggccggcagcccaaggcgcgcgagacg
cgcgagtacctggcgcgggtccggcaatggctcgggcgagatatgcccgaggccgggcag
gcgctgcccgtggcccgcgccgctgctggcgacgtggccgagatccccgctatccccgcc
gagcgcgcccgggtagcgtcctccatcgagcgggaactggccgcagccgaaggcgagcgc
gcagacctaatcgcaaaggctggcggggaagccgagattggccaagtgacggaaatccgc
gcggagttggtggagctgcaagcccagcgcgcggatatcggatcggacgcatcgctgcga
gaactagccaagaaaattcaggccacgccgcgcacaagctacaaagaagcgctgagccag
gcacgtcggcagcgctcggctgagatccaggccttggatggccggatcgagaggctggaa
ggggcgctgtcgcagaaccgcacagcagcccaggccgcccaacgactggccgttctggat
gacgagattggaaacctgcaggccaaccgtgcggccgtacaggaaccggcggccttgccg
accatgaccaatgtgtcggtgcgcagcgctttgggtgaactcggcttgtccgacccgcag
acggctcccatcgatgctgggcgtccggcggggtcgaatccgatggcgcgcgccccggcg
ccgccccgacaggcggtggcgaggcccgctcgcgctgagggtgaggctgccggttcgccg
gcccgccaagagggggatgggggcgaggctcggtccaatgcgcagcctttcgatgacccg
gaaacccaggctggcttgtcgttgctggatgaacagggcgatatcgtcgtgccggttcag
ggtgctgacggcgaaaccatcaacgtgtccctgcgccaggctctggccgatgcggatgcg
gaactgcaatacggccgacctgaggcattcaatgccgccgtggtctgcgctatgacgagg
ggtgcgtaa
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