Orrella dioscoreae: ODI_R2238
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Entry
ODI_R2238 CDS
T05133
Name
(GenBank) Deoxyribodipyrimidine photolyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
odi
Orrella dioscoreae
Brite
KEGG Orthology (KO) [BR:
odi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
odi03400
]
ODI_R2238
Enzymes [BR:
odi01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
ODI_R2238
DNA repair and recombination proteins [BR:
odi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
ODI_R2238
Prokaryotic type
ODI_R2238
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GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
DPRP
Motif
Other DBs
NCBI-ProteinID:
SOE49672
UniProt:
A0A1C3JXE8
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Position
I:complement(2418687..2420105)
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AA seq
472 aa
AA seq
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MASLYWARTDLRVHDNAALHAAAQQGPVTAVYLAAPGQWRIHGDAPAKIDFWLRNLRAFA
DALAERGIDLHVLTMDTWAEAPDLLADFCDAHGIGAVHCNIEYPVNERRRDGLVARRLRE
RGVALLGHHGAVLLAPGTVRTGGGDYYRVFTPFSKRCRDLLREAPLAALPPPAAQSVPRR
GEAPAPTPLSADGFETPPAALGDQWPAGEDAAHAALDAFVDEAITAYDTRRDLPAYRGTS
RVSAYLAAGVLSPGQCLRAALSANQGELDSGSTGVRTWITEILWREFYQHLLAGFPSLSM
HQPMKPETAAVPWRDAPDDLQAWQQGRTGVPIVDAGMRELLACGWMHNRVRMVTAMFLSK
NLLIDWRLGEAWFMAHLVDGDLAANNGGWQWSASTGADAAPYFRVFNPVSQSQRFDPQGV
YLRRWLPELANLDNKAIHEPSAAQRKACGYPAAIVDLKTSRQRAIDAYAGLK
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atggcttcgctgtactgggcacgcaccgacctgcgcgtgcatgacaacgcggcgctgcac
gccgccgcgcaacaagggccggtgacggccgtctacctggcggcccccggtcaatggcgc
atccacggcgacgcgcccgcgaagatcgacttctggctgcgcaacctgcgcgccttcgcc
gacgcgctggccgagcgcggcatcgacctgcacgtgctgacgatggacacctgggccgag
gcgcccgacctgctggccgacttctgcgacgcccacggcatcggcgccgtccactgcaac
atcgaatatcccgtcaacgagcggcgccgcgacggcctggtggcgcgccgcctgcgcgag
cggggcgtggcactcctgggccaccatggcgccgtgctgctggcgcccggcacggttcgc
accggcggcggcgactactaccgcgtcttcacgccgttctcgaaacgctgccgcgacctg
ctgcgcgaagcgccgctggccgccttgccgccccctgccgcgcagtcggtcccgcgacgc
ggcgaggcgcccgcccccacgcccttgtcggccgacggtttcgagacgcccccggccgcg
ctcggcgaccagtggcctgccggcgaggacgccgcccatgccgcgctggatgcgttcgtg
gacgaggccatcacggcctacgacacccgccgcgacctgcccgcctatcgcggcaccagc
cgcgtctccgcctacctggccgccggcgtgctgtcgcccggccagtgcctgcgcgcggcg
ctctcggccaaccagggcgagctcgacagcggcagcacgggcgtgcgcacctggatcacc
gagattctctggcgcgagttctaccagcatctgctggcgggttttcccagcctgtccatg
caccagcccatgaagcccgagacggcggccgtgccctggcgcgacgcgcccgacgacctc
caggcctggcagcagggccgtaccggcgtgcccatcgtggatgccggcatgcgcgagctg
ctggcctgcggctggatgcacaaccgggtgcgcatggtcaccgccatgttcctgtccaag
aacctgctcatcgactggcggctgggagaagcctggttcatggcccatctggtcgatggt
gacctggcggccaacaacggcggctggcaatggtcggcctccaccggcgccgacgccgcg
ccttatttccgcgtcttcaatcccgtgtcgcaatcgcagcgcttcgatccgcaaggggtc
tacctgcgccgctggctgcccgaactggcgaacctggacaacaaggccatccatgagcca
agtgccgcgcaacgcaaggcttgcggctacccggcggccatcgtggacctgaagaccagc
cgacagcgggccatcgatgcctatgccggcttgaagtga
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