Orrella dioscoreae: ODI_R2244
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Entry
ODI_R2244 CDS
T05133
Name
(GenBank) ATP-dependent 23S rRNA helicase DbpA
KO
K05591
ATP-dependent RNA helicase DbpA [EC:
5.6.2.6
]
Organism
odi
Orrella dioscoreae
Brite
KEGG Orthology (KO) [BR:
odi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
odi03009
]
ODI_R2244
Enzymes [BR:
odi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
ODI_R2244
Ribosome biogenesis [BR:
odi03009
]
Prokaryotic type
rRNA helicases
ODI_R2244
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
AAA_22
P-loop_SecA
Cas3-like_C_2
CMS1
TraP
Motif
Other DBs
NCBI-ProteinID:
SOE49680
UniProt:
A0A1C3JXG9
LinkDB
All DBs
Position
I:complement(2424010..2425539)
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AA seq
509 aa
AA seq
DB search
MTPIQAEALPVILSGQDLIAQAKTGSGKTATFGLALLHALNPHLFAVQALVLCPTRELAD
QVALELRKLARAIPNIKILTLCGGTPIRPQTESLAHGAHVVVGTPGRLMDHLARGNLALE
RLRTLVLDEADRMLDMGFFDDIAQIVAQCPARRQTLLFSATYAADIRRASARFLNRPAEV
KVEALHAPTQITQIFYEIPRETREAAVETLIRHFRPVSTLAFCNTRAQCENQAAFLRERG
INALALHGDLEQRDRDAVLLQFANQSCSVLVATDVAARGLDISSLDAVINVDVTQDTEVH
VHRVGRTGRAGEKGLALNLCAPHEMRWATLVEKYLGTPLRWDDIRKLSPAPGGPLLPPMV
TLSILGGKKQKLRPGDLMGALAGEAGLTKEQVGKITVQEFYSYVAIARDVAPRALAALTN
GNIKGRNFRVRIMDGTTRDDEAHAAAPAERARPGGPSRSAPGREAAPSHRAGAGNRAATS
AQPRRGAGDGRAPSRPGAPRTGGPGRRSR
NT seq
1530 nt
NT seq
+upstream
nt +downstream
nt
atgacgcccatccaggcagaagccctgcccgtcatcctgagcggccaggacctcatcgcg
caggccaagaccggcagcggcaagacggccaccttcgggctggcactgctgcacgcgctg
aacccccacctcttcgcggtgcaggcgctggtgctctgccccacgcgcgaactggccgac
caggtcgcgctggaactgcgcaagctggcgcgcgccattccgaacatcaagatcctgacg
ctgtgcggcggcacgccgatccgcccccagaccgagtcgctggcgcacggcgcccacgtc
gtggtgggcacgcccggacggctgatggaccacctggcgcgcggcaacctggcgctggaa
cgcctgcgcacgctggtgctggacgaggcggaccgcatgctggacatgggcttcttcgac
gacatcgcgcagatcgtcgcccagtgcccggcgcgccgccagacgctgctgttctcggcc
acctatgccgccgacatccgccgtgccagcgcccgcttcctgaaccggccggcggaggtc
aaggtcgaggcgctgcacgcgcccacgcagatcacccagatcttctatgagatcccgcgc
gagacgcgcgaggccgcggtagagacgctcatccgccatttccggcccgtgtccacgctg
gcgttctgcaacacccgcgcccagtgcgagaaccaggccgccttcctgcgcgagcgcggc
atcaacgccctggcgctgcacggcgacctggaacaacgtgaccgcgacgcggtgctgctg
caattcgccaaccagagctgctcggtgctggtggccacggacgtggccgcccgcggcctg
gacatcagttcgctggacgccgtcatcaacgtcgacgtgacgcaggacaccgaagtgcac
gtgcaccgcgtgggccgcacgggccgcgccggcgaaaagggcctggcgctgaacctgtgc
gccccgcacgagatgcgctgggccaccctggtggaaaaatacctgggcacgccgctgcgc
tgggacgacatcaggaagctgtcgcctgcccccggcggcccgctgctgccgcccatggtc
acgctcagcatcctgggcggcaagaagcagaagctgcgtcccggcgacctgatgggcgcc
ctggccggcgaggccgggctcaccaaggaacaggtgggcaagatcaccgtgcaggagttc
tacagctacgtcgccatcgcccgcgacgtcgcgccccgcgcgttggccgcgctgaccaac
ggcaacatcaagggccgcaatttccgcgtccgcatcatggacggcacgacccgtgacgac
gaggcgcacgccgccgcccccgccgaacgcgcgcggccaggcggcccctcccgttccgcc
ccgggccgggaggccgccccgtcccaccgggcaggcgctggcaaccgggccgccacatca
gcgcagccgcgccgtggcgccggcgatgggcgtgcccccagccgcccgggtgccccgcgc
acgggcggacccggccggcgctcgcgctag
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