Orrella dioscoreae: ODI_R2315
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Entry
ODI_R2315 CDS
T05133
Name
(GenBank) DinG family ATP-dependent helicase CPE1197
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
odi
Orrella dioscoreae
Pathway
odi03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
odi00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
ODI_R2315
09124 Replication and repair
03420 Nucleotide excision repair
ODI_R2315
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
odi03021
]
ODI_R2315
03036 Chromosome and associated proteins [BR:
odi03036
]
ODI_R2315
03400 DNA repair and recombination proteins [BR:
odi03400
]
ODI_R2315
Enzymes [BR:
odi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
ODI_R2315
Transcription machinery [BR:
odi03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
ODI_R2315
Chromosome and associated proteins [BR:
odi03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
ODI_R2315
DNA repair and recombination proteins [BR:
odi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
ODI_R2315
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C_2
DEAD_2
DEAD
ResIII
Motif
Other DBs
NCBI-ProteinID:
SOE49800
UniProt:
A0A1C3K598
LinkDB
All DBs
Position
I:complement(2492121..2494421)
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AA seq
766 aa
AA seq
DB search
MKLEVAVRTLCDFTARAGDLDSRFTPAPTALEGMAGHAVIAHRRAAHVEHEVTLSANHAG
LTVRGRADGYDPRARRVEEVKTYRGDLAALRANQRALHRAQARVYGHMLCASRDLAEITV
AVVYFNLDTEEETAEAETLDAATLASLFNDLCERYAGWAMQERAHREARDGALEDLAFPY
GQMRAGQRELAVAVYRAARDGHPLMAQAPTGVGKTLGTLFPLLKACATQGLDKVYFLSAK
GPGHGLALDAVARLHASREGGLPLRVVALVARDKACAEPDRACHGDACPRARGFYDRLPA
ARAQALARPDATLTREAVRAVADAHGVCPYYLNQELARWSDVVVGDYNYWFDANAMLHAL
TLAHQWRVAVAVDEAHNLLARARRMYSVTLSMAELRAARLAAPGHLRKPLDALLRSWRAV
QKKQDSPYAAYDTVPAKLREAAQRASTALAEHFAGGPAAPDDPALSLYFTLLQFGRLADS
FGTHALFDLTVTEGAGLRAKPESEICIRNVVPAPYLAARHAAARSTVLFSGTFSPQSFHQ
DTLGLPATTGWVDVCAPFDQAQLQVNVVGHVSTRWRDRAGSVAPIADLVARQYAAQPGNY
LVFLSSFAYLEQVAAQLAAAHPGIPTWTQAARMNDDARAAFLGRFTETGQGVGFAVLGGA
FSEGVDLPGRRLIGAFIATLGLPQVNPVNEQMLAAMRARFGDALAYDYTYLYPGLQKVVQ
AAGRVIRTETDTGTVYLIDDRYRQRKVRVLLPDWWRVAETRPPRAA
NT seq
2301 nt
NT seq
+upstream
nt +downstream
nt
atgaagctggaagtggccgtgcgcacgctgtgcgacttcaccgcgcgcgcgggcgacctg
gactcgcgcttcacgcccgcgccgacagcgctggaaggcatggccggccacgccgtcatc
gcccaccggcgcgcggcgcacgtcgaacacgaggtcaccttgtcggccaaccatgcaggc
ctgacggtgcgcggccgcgccgacggctacgacccgcgtgcccggcgcgtggaggaagtg
aagacctaccgcggcgacctggccgccttgcgcgccaaccagcgtgccctgcaccgggcg
caggcgcgggtctacggccacatgctgtgcgcctcgcgcgacctggccgagatcaccgtg
gcggtcgtctatttcaacctcgacacggaagaagaaaccgccgaggccgaaaccctggac
gccgccacgctggccagcctcttcaacgacctgtgcgaacgctacgccggctgggccatg
caggagcgcgcgcaccgcgaagcccgcgacggcgcgctcgaggacctggccttcccttat
gggcagatgcgcgccgggcaacgcgaactggccgtggcggtgtatcgcgccgcccgcgac
ggccatccgctcatggcgcaggcgcccaccggcgtcggcaagacgctgggcacgctgttt
ccgctgctcaaggcctgcgccacccaggggctggacaaggtctacttcctgtccgccaag
gggcctggccacggcctggcgctggacgccgtcgcgcgcctgcacgcctcgcgcgagggc
ggattgccgttgcgggtggtggcactggtggcgcgcgacaaggcctgcgcggaacctgac
cgcgcctgccacggcgacgcctgcccgcgcgcaagaggcttctacgaccgcctgccagcc
gcccgcgcgcaggcactggcgcgccccgatgccacgctgacccgcgaggcggtccgggcc
gtggcggacgcgcacggcgtctgcccctattacctgaaccaggaactggcgcgctggagc
gacgtggtggtgggcgactacaactattggttcgacgccaacgccatgctccatgccctg
accctggcgcatcaatggcgcgtggcggtggcggtggatgaagcgcacaacctgctggcg
cgcgcgcgccgcatgtacagcgtcacgctgtcgatggccgagctgcgtgccgcgcgcctg
gcggcgccaggacatctgcgcaagccgctggacgcactgctcaggtcctggcgcgccgtc
cagaagaagcaggacagcccgtacgccgcctacgacacggtgcccgccaagctgcgcgag
gccgcgcagcgcgccagcacggcgctggccgaacacttcgcgggcggccccgccgcgccg
gacgatcccgcgctgtcgctgtacttcacgctgctgcagttcggccgcctggccgacagc
ttcggcacccatgcgctgttcgacctcaccgtcaccgaaggcgcgggcctgcgcgccaag
cccgaatcggagatctgcatccgcaacgtcgtgcccgcgccttacctggccgcccgccac
gccgccgcgcgcagcaccgtgctgttctcgggcacgttcagcccgcagtccttccaccag
gacacgctgggcctgccggccacgacaggctgggtcgatgtctgcgcgccgttcgaccag
gcgcaactgcaggtcaacgtcgtgggccatgtctccacccgctggcgcgaccgggccggc
tcggtcgcgcccatcgccgacctggtggccaggcaatacgccgcccaaccgggcaactac
ctggtcttcctgagcagcttcgcctatctggaacaggtggctgcgcaactggcggccgcg
catcccggcattcccacatggacgcaagccgcgcggatgaacgacgacgcccgcgcggcg
ttcctcgggcgcttcaccgaaacagggcagggcgtggggttcgcggtgctgggcggggct
ttctcggaaggcgtggatctgccgggccgccgcctcatcggcgccttcatcgccacgctg
ggcctgccccaggtcaatccggtgaacgaacagatgctggccgccatgcgcgcacgtttc
ggcgatgcgctggcctatgactacacctatctctatcccggcctgcagaaagtggtgcag
gccgcggggcgggtcatccggacggaaaccgacaccggcacggtctatctcatcgatgac
cgctaccgtcagcgcaaggtgcgcgtcttgctgcccgactggtggcgcgtggccgaaacg
cgtccgcctagggctgcctga
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integrated database retrieval system
