Orrella dioscoreae: ODI_R2401
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Entry
ODI_R2401 CDS
T05133
Name
(GenBank) LysR family transcriptional regulator YbhD
KO
K17737
LysR family transcriptional regulator, carnitine catabolism transcriptional activator
Organism
odi
Orrella dioscoreae
Brite
KEGG Orthology (KO) [BR:
odi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
odi03000
]
ODI_R2401
Transcription factors [BR:
odi03000
]
Prokaryotic type
Helix-turn-helix
LysR family
ODI_R2401
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
PBP_like_2
Motif
Other DBs
NCBI-ProteinID:
SOE49928
UniProt:
A0A1C3JYK9
LinkDB
All DBs
Position
I:complement(2581514..2582431)
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AA seq
305 aa
AA seq
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MNLSTRQLRAFVALADERHFTRAAARCHLTQPAFSAMIRGIEDDAGVKLFHRSTRHVELT
AEGAVLDASARRLLADFDLVMADLQDHAARRRGHVALAALPSLAAGWLPAILADFKGAYP
GISLDLRDALLGGCLEMVHSGRVDFAVAARGPDMNELETVLLQSDRYHLVCPAEHPLAQQ
AKVRMQDVVRWPMIQLARNSSVRVLLEDALGAQLPPPVLEVEHLATVAGLVMAGLGVTVV
PAMTLFHFRRPELAIRPLAGKGLARALYLIKREGRTLSVAAETLYQLLMQRRGEIGARNT
PAGLS
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atgaatctatcgacccggcaattgcgcgcgttcgtggccttggcggacgaacggcacttc
acgcgcgccgcggcgcgctgccacctgacccagcccgcgttcagcgccatgatccgcggc
atcgaggacgatgccggcgtgaagctgttccaccgcagcacgcggcacgtcgaattgaca
gcggaaggcgcggtgctcgacgcgtcggcgcggcgcctgctggccgatttcgacctcgtc
atggccgacctgcaggaccatgccgcaaggcgccggggccacgtcgcactggcggcgctg
ccgtccctggccgcgggctggttgcccgcgatcctggccgacttcaagggggcctatccg
ggcatcagcctggacctgcgcgatgcgctgctgggcggctgcctcgagatggtgcacagc
ggccgggtggatttcgccgtggccgcgcgcgggccggacatgaacgagctggaaaccgtg
ctgctgcaaagcgaccgctatcacctcgtctgcccggcggaacacccgctggcgcagcag
gccaaggtccgcatgcaggacgtggtgcgctggccgatgatccagctggcgcgcaacagc
agcgtgcgcgtgttgctggaggatgcgctgggcgcgcagttgccgccgcccgtgctcgaa
gtcgaacacctggccacggttgccggattggtgatggcgggcctgggcgtgacagtggtg
ccggccatgacgctcttccatttccgccgtcccgaactggcgatccgtccgctggccggc
aaaggcctggcgcgcgcgctgtacctgatcaagcgggaagggcgcaccttgtcggtcgcg
gcggaaacgctctatcagttgctgatgcagcggcggggcgaaatcggcgcgcgcaacacg
cccgctggcctttcataa
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