Orrella dioscoreae: ODI_R2449
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Entry
ODI_R2449 CDS
T05133
Name
(GenBank) Diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
odi
Orrella dioscoreae
Pathway
odi00300
Lysine biosynthesis
odi00470
D-Amino acid metabolism
odi01100
Metabolic pathways
odi01110
Biosynthesis of secondary metabolites
odi01120
Microbial metabolism in diverse environments
odi01230
Biosynthesis of amino acids
Module
odi_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
odi00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
ODI_R2449
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
ODI_R2449
Enzymes [BR:
odi01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
ODI_R2449
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Gene cluster
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Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
PP-binding
Motif
Other DBs
NCBI-ProteinID:
SOE50008
UniProt:
A0A1C3K7J2
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All DBs
Position
I:2633871..2635436
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AA seq
521 aa
AA seq
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MDLTLAPGQRQAYLALVEQYGTPLYVYDGDAIAARYRQLRAGLPPEVEIYYSLKANPNVS
VCALLGREGAGAEVSSLAELETARWAGVAARDTIFLGPGKSDEELRACVASRPLAVIVES
LQELAALERHAAAARQPLDILLRVNPAASARHRGLSMGGKPRQFGIDEETVLASAATLRA
LQWLRPRGLHVFFGTRFLDYTEIVANTQRVFELVHAYEAATGLAADIVGIGGGFGVAYYD
NETDLDIRALLPALSDTVRHFLAGRGATRIITEQGRYLTAESGAFLTRVRYAKPSRGQVY
AVVDGGTNHHLSAVGVGNVLKRDFPLVSLAPAGDRATVPVTVAGPLCTPSDVLARKVPLP
DPEPGDLLAVLRSGAYGPSASPGLFLGHGFPAEVLLRNGDSHLVRRRDTPRDVLAPQRLA
TPFASLPSLPDEASMTRSTIVHTLGAVISRVTGQETGEVSERTRVFDDLNLDSISILEVL
VALESEFGIDVDPDALTAQDLETLGAVANYVEARLPETQRG
NT seq
1566 nt
NT seq
+upstream
nt +downstream
nt
atggacctcacgcttgcgcccggccaacggcaggcctacctggccctggtcgaacagtac
ggcacgccgctctacgtgtacgacggcgacgccatcgcggcccgctatcgccagctgcgg
gcgggcctgccgcccgaggtcgagatctactactccttgaaggccaacccgaacgtcagc
gtgtgcgcgctgctgggccgggagggcgcgggcgccgaggtctcgtcgctggccgagctg
gaaacggcacgctgggcgggcgtggccgcaagggacaccatcttcctcggcccaggcaag
agcgacgaggagttgcgggcctgcgtggcgtcgcggcccctggcggtcatcgtcgagtcg
ctgcaggaactggccgcgctggaacggcatgccgcggcggcccgccagccgctggacatc
ctgctgcgggtcaacccggccgccagcgcccggcatcgcggcctgtccatgggcggcaag
cccaggcaattcggcatcgacgaagagaccgtgctggccagcgccgccaccttgcgcgcc
ttgcaatggctgcgcccgcgcggcctgcacgtgttcttcggcacccgtttcctggactac
accgagatcgtcgccaatacgcagcgggtgttcgaactggtgcatgcctacgaggccgcc
accgggctggccgccgacatcgtgggcatcggcggcggcttcggcgtggcctattacgac
aacgagaccgacctggacatccgggcgctgctgcccgcgttgtcggacaccgtcaggcac
ttcctggctggccggggcgccacccgcatcatcaccgagcaggggcgctacctgaccgcc
gaaagcggcgcgttcctgacccgggtgcgctatgcgaaaccctcgcgcgggcaggtgtac
gcggtcgtcgacggcggcaccaaccaccacctgagcgccgtgggtgtcggcaacgtgctg
aagagggattttccgctggtgtcgctggcgccggcgggcgaccgtgccacggtgcccgtc
acggttgccggccccttgtgcacgcccagcgacgtgctggccaggaaggtcccccttccc
gatcccgaacctggcgacctcctggccgtgctgcgatcaggcgcctacggcccgtccgcc
tcgcccggccttttcctcggccacggcttcccggcggaggtcctgctgcgcaacggcgac
tcgcacctggtgcgccgccgcgacacgccgcgggacgtgctcgcgccgcagcggctggcg
accccgtttgcttcccttccttccttacctgacgaggcttccatgacccgatccaccatc
gtgcacaccctaggcgccgtcatctcgcgcgtcaccggccaggagacaggcgaggtctcg
gagcgcacccgcgtcttcgacgacctgaacctggactccatctccatcctcgaagtcctc
gtggcgctggagagcgaattcggcatcgatgtcgaccccgacgcgctcaccgcgcaggac
ctggaaacgctgggtgccgtcgccaactacgtcgaggcgcgcctgcccgaaacgcagcgc
ggctga
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