Orrella dioscoreae: ODI_R2530
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Entry
ODI_R2530 CDS
T05133
Name
(GenBank) Sigma factor, ECF subfamily
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
odi
Orrella dioscoreae
Pathway
odi02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
odi00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
ODI_R2530
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
odi03021
]
ODI_R2530
Transcription machinery [BR:
odi03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
ODI_R2530
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
HTH_23
TetR_C_31
Motif
Other DBs
NCBI-ProteinID:
SOE50137
UniProt:
A0A1C3K7B1
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All DBs
Position
I:complement(2727284..2727799)
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AA seq
171 aa
AA seq
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MYKLQAEMVPQERMHKLYCDHHGWLEGVLRRKLGNRDDAADLAQDTFERVLRTPAQVALR
EPRGYLRAVAINLMRNRYRRAALERAYLEALAARPELTAPSPETQRLLMEALEAVHAVLD
GMPERTRRIFLMAQMDGMPYKAIAAELDITVNVVQKAVVRGLQHCYQAVYA
NT seq
516 nt
NT seq
+upstream
nt +downstream
nt
atgtacaagctgcaggcagaaatggttccccaagaacgcatgcacaagctgtattgcgat
catcatggctggctggagggggtgttgcgccgcaagctggggaatcgcgacgatgccgcc
gacctggcgcaggatacgttcgagcgggtgctgcgaacgcccgcgcaggtggcgttgcgg
gagccacgcggctatctgcgcgccgtggccatcaacttgatgcgcaaccgctaccggcgt
gccgcgctggaacgtgcctacctcgaggcgctggccgcgcgccccgaactgaccgcgccg
tcgcctgaaacccagcgattgctgatggaagccctggaagccgtccatgcggtgctcgat
ggcatgcccgaacgcacccgccgcatcttcctgatggcccagatggacggcatgccgtac
aaggccattgccgctgaactcgacatcacggtcaacgtcgtgcagaaagccgtggtacgt
ggcttgcagcattgctaccaggctgtctatgcgtga
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