Orrella dioscoreae: ODI_R2867
Help
Entry
ODI_R2867 CDS
T05133
Name
(GenBank) Transcription accessory protein (S1 RNA-binding domain)
KO
K06959
protein Tex
Organism
odi
Orrella dioscoreae
Brite
KEGG Orthology (KO) [BR:
odi00001
]
09190 Not Included in Pathway or Brite
09192 Unclassified: genetic information processing
99973 Transcription
ODI_R2867
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tex_central_region
Tex_YqgF
Tex_N
HHH_3
HHH_9
S1
YqgF
S1_RRP5
HHH_7
T2SSK
Spt6_S1
DUF460
HHH_6
Motif
Other DBs
NCBI-ProteinID:
SOE50651
UniProt:
A0A1C3K037
LinkDB
All DBs
Position
I:3118755..3121130
Genome browser
AA seq
791 aa
AA seq
DB search
MSDTTLSFVAEPPEAVKARIVAQLANELGVRAAQVAATLDLLDDGATVPFIARYRKEATG
GLDDTVLRNLDVRLVYLRELEERRGAILESVAQQGKLTAALDKELRDADTKQRLEDLYAP
YKPKRRTRAQIAREAGLEPLADAILADAACDPQALAEGYVKPDAGVADAKAALDGARDIL
AERYAENADLIANLREHLWSTGLLVSKVAEGKEAEGDNFRDWFDFSEALRSLPSHRILAL
LRGRQQGVLELRVGLEPEREALVPHPCVARVADFLKLGRDLFATDATPRARWLGEVCRWT
WRVKLLTAFETELIGKLRETAETQAIHVFAENLKDLLLAAPAGPKTVLGLDPGIRTGVKV
AVIDPTGKLVDTATVYPFEPRRDRTGSLATLAALAKRHKVELIAIGNGTASRETEKLAAE
LSSALPELNMNRIVVSEAGASVYSASELAAAEFPDLDVSLRGAVSIARRLQDPLAELVKI
EPKAIGVGQYQHDVNQRELARSLDAVIEDCVNAVGVDVNTASAPLLTRVSGLNSTLARNI
VAHRDSHGAFASRRALLDVSRFGDKAFEQAAGFLRIPQGDNPLDASSVHPEAYPVVERIL
ARIQADARQVVGNRDALKGLSPSEFTDERFGLPTVKDIFSELEKPGRDPRPEFKTATFKE
GVETLNDLLPGMILEGVVTNVAAFGAFVDIGVHQDGLVHISALSDKFIKEARDVVRVGQT
VKVKVQEVDAARKRIALTMRLDDDALPARRSGPAAGNDSRGNRPAGGGKRPGQSAPPPGG
AMAEAFARLKR
NT seq
2376 nt
NT seq
+upstream
nt +downstream
nt
atgtccgacaccaccctttccttcgtcgccgaaccgcccgaggccgtcaaggcgcgcatc
gtggcgcaactggccaacgagctcggcgtgcgcgccgcgcaggtcgcggccacgctggac
ctgctggatgacggagcgaccgtgcccttcatcgcccgctaccgcaaggaagccactggc
ggcctggacgacaccgtcctgcgcaacctcgacgtgcgcctggtctatttgcgtgaactg
gaagagcgccgcggcgccatcctggaatcggtggcgcaacaaggcaagctgaccgccgcc
ctggacaaggaattgcgcgacgccgacaccaagcaacgcctggaagacctgtacgcgccc
tacaagcccaagcgccgcacccgcgcccagatcgcgcgggaagccggcctggagccgctg
gcggacgccatcctggccgacgccgcctgcgatccgcaggcgctggccgagggctatgtg
aagcccgacgcgggcgtggcggacgccaaggcggcgctggacggcgcgcgtgacatcctg
gccgagcgctatgccgagaatgccgacctcatcgccaacctgcgcgagcacctctggtcc
acgggcctgctggtctccaaggtggcggaaggcaaggaagccgaaggcgacaacttccgc
gactggttcgacttcagcgaagcgctgcgcagcctgccctcgcaccgcatcctggcgctg
ctgcgcggccgccagcagggcgtgctggaactgcgcgtgggcctggagcccgagcgcgaa
gccctggtcccgcacccctgcgtggcgcgcgtggccgacttcctgaagctgggccgcgac
ctcttcgccaccgacgccacgccgcgcgcgcgctggctgggcgaggtctgccgctggacc
tggcgcgtgaagctcctgacggcgttcgagaccgagctcatcggcaagctgcgcgagacc
gccgaaacgcaggccatccatgtgttcgccgagaacctgaaagacctgctgctggccgcg
cccgcgggccccaagaccgtgctgggcctggaccctggcatccgcactggcgtgaaggtg
gcggtcatcgaccccaccggcaagctggtggacaccgcgaccgtctatcccttcgagccg
cgccgcgaccgcacgggctcgctggccacgctggccgcgctggccaagcgccacaaggtc
gagctcatcgccatcggcaacggcaccgcttcgcgtgaaaccgagaagctcgccgccgaa
ctcagcagcgcgctgcccgaactcaacatgaaccgcatcgtggtgtcggaagccggcgct
tcggtctattcggcgtcggaactggccgcggccgaattccccgacctggacgtgagcctg
cgcggcgccgtgtccatcgcccgccgcctgcaggatccgctggccgagctggtcaagatc
gaacccaaggccatcggcgtgggccagtaccagcacgacgtcaaccagcgcgagctggcg
cgctcgctggatgccgtgatcgaggattgcgtgaacgccgtgggcgtggacgtgaacacc
gcctcggcgccgctgctcacccgcgtgtcgggcctgaacagcaccctggcgcgcaacatc
gtggcgcaccgcgacagccacggcgccttcgcctcgcgccgcgcgctgctcgacgtgtcc
cgcttcggcgacaaggcgttcgaacaggccgcgggattccttcgcattccgcaaggcgac
aatccgctggacgcgtcctcggtccaccccgaggcctatcccgtcgtcgagcgcatcctg
gcccgcatccaggccgacgcgcgccaggtggtcggcaaccgcgatgcgctcaagggcctg
tcgccgtccgaattcaccgatgagcgcttcggcctgcccacggtcaaggacatcttctcc
gaactggaaaagcccggccgcgacccgcgtcccgagttcaagaccgccaccttcaaggag
ggcgtcgaaacgctgaacgacctgctgcccggcatgatcctggaaggcgtcgtgaccaac
gtcgccgccttcggtgccttcgtggacatcggggtgcaccaggacggcctggtgcacatc
tcggcgctgtcggacaagttcatcaaggaagcgcgcgacgtggtgcgcgtgggccagacc
gtcaaggtgaaggtccaggaagtcgacgccgcccgcaagcgcattgcgctgaccatgcgc
ctggacgacgacgccctgcccgcgcgccgcagcggccccgccgctggcaacgacagccgc
ggcaaccgtcctgccggcggcggcaagcgccccggccagtccgccccgcccccgggcggc
gccatggccgaggccttcgcgcgcctcaagcgctag
DBGET
integrated database retrieval system
