Orrella dioscoreae: ODI_R2932
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Entry
ODI_R2932 CDS
T05133
Name
(GenBank) Dipeptide-binding ABC transporter, periplasmic substrate-binding component (TC 3.A.1.5.2)
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
odi
Orrella dioscoreae
Pathway
odi02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
odi00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
ODI_R2932
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
odi02000
]
ODI_R2932
Transporters [BR:
odi02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
ODI_R2932
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
BatA
Motif
Other DBs
NCBI-ProteinID:
SOE50737
UniProt:
A0A1C3K0L0
LinkDB
All DBs
Position
I:complement(3194314..3196542)
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AA seq
742 aa
AA seq
DB search
MYAGLGAAVLALAGCSPDTPINSPYPSGAESENTLYSAFTQRSPKYLDPASSYSSDETPY
TYNIYEPLYGYHYLKRPYELVPRAAAALATPRYVDAQGNPLPDDAPGEQIAESVYDIPIR
PGIQFQPHPVFARDEQGGHVYYPLPPDGLEGRYDIPDFERTGTRELTAHDYVYAIRRLAS
PRVVSPIYGVMAEHIVGMGDYGKALRTRDAALRKGVPAGQRDLPWLDLREGGFDGVSALD
DHTLRIRVIGKYPQFKYWLAMTFMAPIPWEADRFYSQPGMAERNLSLNTWPVGTGPFMLA
ESRQNERHVLARNPNFRGEPYPCEGEPGDREAGLLDDCGKPMPFLDRVVFSIEKEAIPLQ
GKFLQGYYDIPQVERGEYGVAFLVASGDSAEKAELYAQRGLQLPTTVATASWYMGFNWKD
PVVGQGDTPEQQERNRKLRQAISIAFDWEEYVAIFENSQGQVAQGPVPPGVLGYQGGPEG
VNRQVYDLKGGQPVRKSIDEAKRLLAEAGYPGGRDEKTGAPLVLHYDAMGGMGASPQFDW
MRRKLAQMGVQLDVRSTDYNRFQDKMRRGVAQIFLWGWGADYPDAENFLFLLYGPNAKAD
GGGENAANYRSPEFDALFEQMRFLDDGPEKEAVIHKMVAITQRDAPWMFGYFPKSGGAYH
QWVGNAKPTQMVRNTLQFMKVDPALRAQRTAEWNSPVWWPLPLLALLLALAIWPAWRTLK
RRERQTAFGDAAGRQQSGADKA
NT seq
2229 nt
NT seq
+upstream
nt +downstream
nt
atgtatgcggggcttggggcggcagtgctggcattggccggctgctcgccggataccccc
atcaacagcccttatccgagcggcgccgaaagcgagaacacgctttattcggccttcacg
cagcgctcgcccaagtatctcgatccggccagctcctattcctccgacgagacgccctat
acctacaacatctacgagccgctgtatgggtaccactacctgaagcggccctatgaactg
gtgccgcgcgcggcggcggcgctggccacgccgcgctacgtcgatgcgcaaggcaacccc
ttgcccgacgatgcgccgggcgagcagatcgccgaaagcgtctacgacattcccatccgg
cccggcatccagttccagccgcatcccgtgttcgcgcgcgacgagcagggcggccatgtc
tattaccccttgccgcccgatggcctggagggccgctacgacattcccgatttcgagcgc
accggcacgcgtgaactgaccgctcacgactatgtctatgcgatccgccgcctggccagc
ccgcgcgtggtgtcgcccatctatggcgtcatggccgagcacatcgtgggcatgggcgat
tacggcaaggcgctgcgcacccgcgatgcggcactgcgcaagggcgtgccggcgggccag
cgcgacctgccgtggctggacctgcgcgaaggcgggttcgatggcgtcagcgccctggac
gaccacaccttgcgcatccgcgtgatcgggaagtatccgcagttcaagtattggctggcc
atgaccttcatggcgcccattccctgggaggccgaccgcttctacagccagcccggcatg
gccgaacgcaatctgtcgctgaacacctggcccgtgggcacggggccgttcatgctggcc
gagtcgcgccagaacgaaaggcacgtgctggcgcgcaaccccaatttccgcggcgaaccg
tatccctgcgaaggcgaaccgggcgaccgcgaggcgggcctgctggacgattgcggcaag
cccatgcctttcctggaccgcgtggtcttcagcatcgagaaggaagccattcccttgcag
ggcaagttcctgcagggctattacgacattccccaggtcgagcgtggcgagtacggcgtg
gctttcctggtggcctcgggcgattcggctgaaaaggccgagctctatgcccagcgcggc
ctgcaactgccgaccacggtggcgacggcaagctggtacatgggcttcaactggaaggac
ccggtggtggggcagggcgacacgcccgagcagcaggaacgcaaccgcaagctgcgccag
gccatcagcatcgccttcgactgggaagaatacgtcgccatcttcgagaacagccagggc
caggtggcccaggggccggtgccgcccggcgtgctgggctaccagggcggcccggagggt
gtgaaccgccaggtctacgacctgaagggcggccagccggtacgcaagtccatcgatgag
gccaagcgcctgctggccgaggcgggctatccgggcgggcgcgacgagaagaccggcgcg
ccgctggtgctgcactacgatgcgatgggcggcatgggcgccagcccgcagttcgactgg
atgcggcgcaagctggcgcagatgggcgtgcagctggacgtgcgctccaccgactacaac
cgtttccaggacaagatgcgccgcggcgtggcgcagatcttcctgtggggctggggcgcc
gactatcccgacgcggagaacttcctgttcctgctctacggccccaacgccaaggcagac
ggcggcggcgaaaacgccgccaactatcgcagtcccgagttcgatgcgctgttcgagcag
atgcgcttcctggacgatggccccgagaaagaggccgtgatccacaagatggtcgccatc
acccagcgcgatgcgccgtggatgttcggctacttcccgaagtccggcggggcgtatcac
cagtgggtgggcaacgccaagccgacgcagatggtgcgcaataccttgcagttcatgaag
gtggacccggccctgcgggcccagcgcacggccgaatggaattcccccgtgtggtggccc
ctgccgctgctggcgctgttgctggcgctggccatctggccggcctggcgcaccctgaaa
cgccgtgagcgccagaccgcgtttggcgatgccgccgggcggcaacaatccggagccgac
aaagcatga
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